CX288560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.312e-13 Identity = 40/97 (41.24%), Postives = 55/97 (56.70%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALA-ALYHQIVIRAIPFKSK 289 +T+F++ D+KR V L IGF+V + HL I TG +NPARS G A+I W++HWI+W GP IGA LA ALY + + K + Sbjct: 172 FTIFASCDSKRTDVTGSVA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGALYEYVFCPDVELKRR 261
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 8.243e-13 Identity = 39/97 (40.21%), Postives = 55/97 (56.70%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALA-ALYHQIVIRAIPFKSK 289 +T+F++ D+KR + L IGF+V + HL I TG +NPARS G A+I W++HWI+W GP IGA LA ALY + + K + Sbjct: 175 FTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGALYEYVFCPDVELKRR 264
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.077e-12 Identity = 37/86 (43.02%), Postives = 52/86 (60.47%), Query Frame = 2 Query: 8 VFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 265 +F +TD +R + H L IGF+V L HL I TG +NPARSL A++ K +DDHW+FW GP +GA +A+L + V+ Sbjct: 145 IFPSTDKRRGKQLGH----PALSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGK---FDDHWVFWIGPLVGAIVASLLYNYVL 223
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.406e-12 Identity = 30/68 (44.12%), Postives = 44/68 (64.71%), Query Frame = 2 Query: 65 APLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIR 268 APL +G ++ HL I +TG +NPARS G A++ N W DHW++W GP +GA +AAL ++ V + Sbjct: 174 APLAVGLSIAAGHLCAIKLTGASMNPARSFGPAVVQNM---WIDHWVYWVGPIVGAIVAALLYKFVFK 238
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.836e-12 Identity = 30/69 (43.48%), Postives = 45/69 (65.22%), Query Frame = 2 Query: 65 APLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRA 271 AP+ +G A+ HLA I TG+ +NPARS G A+ N D W +HW++WAGP +G +A + ++ + RA Sbjct: 177 APVAVGLAITCCHLAAIKYTGSSMNPARSFGPAV--NGDDNWANHWVYWAGPIVGGVVAGITYRALFRA 243
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.398e-12 Identity = 38/97 (39.18%), Postives = 54/97 (55.67%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALA-ALYHQIVIRAIPFKSK 289 +T+F++ D+KR + L IGF+V + HL I TG +NPARS G A+I W++HWI+W GP IGA LA LY + + K + Sbjct: 172 FTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGGLYEYVFCPDVELKRR 261
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.398e-12 Identity = 37/86 (43.02%), Postives = 51/86 (59.30%), Query Frame = 2 Query: 8 VFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 265 +F++TD +R P L IGF+V L HL I TG +NPARSL A++ K +DDHW+FW GP +GA L +L + V+ Sbjct: 145 IFASTDERRGEN----PGTPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAVVTGK---FDDHWVFWIGPLVGAILGSLLYNYVL 223
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.091e-12 Identity = 40/89 (44.94%), Postives = 52/89 (58.43%), Query Frame = 2 Query: 2 YTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 265 Y V+S A D KR + + I+APL IG V L P G +NPAR+ G AL+ W +HWI+W GPFIG ALAAL ++ +I Sbjct: 165 YVVYSTAIDPKRGS----IGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPALV---GWRWSNHWIYWVGPFIGGALAALIYEYMI 246
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.091e-12 Identity = 39/89 (43.82%), Postives = 53/89 (59.55%), Query Frame = 2 Query: 2 YTVFSAT-DAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 265 Y V+S D KR + + I+APL IG V L P +G +NPAR+ G AL+ W DHWI+W GPFIG+ALAAL ++ ++ Sbjct: 165 YVVYSTLIDPKRGS----LGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPALV---GWRWHDHWIYWVGPFIGSALAALIYEYMV 246
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 5.343e-12 Identity = 38/97 (39.18%), Postives = 54/97 (55.67%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALA-ALYHQIVIRAIPFKSK 289 +T+F++ D+KR + L IGF+V + HL I TG +NPARS G A+I W +HWI+W GP +GA LA ALY + + K + Sbjct: 172 FTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WANHWIYWVGPIMGAVLAGALYEYVFCPDVELKRR 261 The following BLAST results are available for this feature:
BLAST of CX288560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288560 ID=CX288560; Name=CX288560; organism=Citrus clementina; type=EST; length=467bpback to top |