CX288562
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: GALE_CORDI (UDP-glucose 4-epimerase OS=Corynebacterium diphtheriae GN=galE PE=3 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 4.160e-31 Identity = 77/194 (39.69%), Postives = 109/194 (56.19%), Query Frame = 1 Query: 16 TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYA 597 TL +L++M R+ V +++SST ATYGEPE +PITE+ P P NPYG K + I ++ A LRYFNV G+ G +GE E+ H + A G + + G D+ T DGT +RDYI + DL DAH+ AL+ I+N+G+G+G SVK+ ++ C++ T I PRR GD A Sbjct: 95 TLALLDAMKRNNVRNIVFSSTAATYGEPETVPITEDAPTHPTNPYGATKLSIDYAITSYAHAYGFAATSLRYFNVAGA--YGLVGE--NREIETH--LIPLVLQVALGHRDKIFMFGDDWPTEDGTPIRDYIHIRDLADAHILALQSNVEGSHRIFNLGSGEGYSVKQVIDTCREVTGHLIPAEVAPRRAGDPA 282
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: GALE_DROME (Probable UDP-glucose 4-epimerase OS=Drosophila melanogaster GN=CG12030 PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 9.269e-31 Identity = 83/204 (40.69%), Postives = 115/204 (56.37%), Query Frame = 1 Query: 1 NITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSKNSDM-AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQP-KKVGI--YNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYA 597 N + T V+LE+MA + V +YSS+ YGEP+ +P+TEE P +PYGK K E+I+ D K+ AV+ LRYFN +G+ GR+GE P E + A G L V G+D+ T DGT VRDYI + DL + HVKAL++ + + G YN+GTG G SV + V+A +KA+ + RR GD A Sbjct: 108 NNMTGTNVLLEAMADNNVFKFVYSSSATVYGEPKFLPVTEEHPTGNCTSPYGKTKYFTEEILKDLCKSDKRWAVVSLRYFNPVGAHISGRIGEDPNGE---PNNLMPYIAQVAVGRRPSLSVYGSDFPTHDGTGVRDYIHIVDLAEGHVKALDKLRNIAETGFFAYNLGTGVGYSVLDMVKAFEKASGKKVNYTLVDRRSGDVA 308
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: GALE_DICDI (UDP-glucose 4-epimerase OS=Dictyostelium discoideum GN=galE PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.211e-30 Identity = 79/202 (39.11%), Postives = 109/202 (53.96%), Query Frame = 1 Query: 1 NITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDF-SKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQPKKVG--IYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYA 597 N + TL +L M +H V L++SS+ YG+P +PITE+ P + NPYG+ K E I+ D + + + ++LRYFN +G+ P G +GE P+ + A G L + G DY+T DGT VRD+I V DL H+ AL KK G YN+GTG+G SV E V A K+A+ I RR GD A Sbjct: 104 NNIAGTLTLLNLMDKHRVKKLVFSSSATVYGDPHTVPITEDFPLSATNPYGRTKLYVEGILQDLCASDPEWNCIMLRYFNPVGAHPSGLIGEDPKD---IPNNLMPYVTQTAIGKRPILSIFGNDYNTPDGTGVRDFIHVVDLAKGHISALSSLHSKKQGCVAYNLGTGRGYSVLEMVGALKQASHKEIPYQIVSRRKGDVA 302
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: GALE_SALTY (UDP-glucose 4-epimerase OS=Salmonella typhimurium GN=galE PE=3 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 3.522e-30 Identity = 81/200 (40.50%), Postives = 106/200 (53.00%), Query Frame = 1 Query: 1 NITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQPKK-VGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGD 591 N + TL ++ +M V LI+SS+ YG+ K+P E P P +PYGK+K M E I+ D K + ++ +LRYFN +G+ P G +GE P+ + A G L V G DY T DGT VRDYI V DL D HV A+E+ K V IYN+G G G SV + V A KA I + PRR GD Sbjct: 99 NNVNGTLRLVSAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPEWSIALLRYFNPVGAHPSGDMGEDPQGI---PNNLMPYIAQVAVGRRESLAVFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLADKSGVHIYNLGAGVGSSVLDVVNAFSKACGKPINYHFAPRRDGD 295
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: GALE_SALTI (UDP-glucose 4-epimerase OS=Salmonella typhi GN=galE PE=3 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 3.522e-30 Identity = 81/200 (40.50%), Postives = 106/200 (53.00%), Query Frame = 1 Query: 1 NITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQPKK-VGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGD 591 N + TL ++ +M V LI+SS+ YG+ K+P E P P +PYGK+K M E I+ D K + ++ +LRYFN +G+ P G +GE P+ + A G L V G DY T DGT VRDYI V DL D HV A+E+ K V IYN+G G G SV + V A KA I + PRR GD Sbjct: 99 NNVNGTLRLVSAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPEWSIALLRYFNPVGAHPSGDMGEDPQGI---PNNLMPYIAQVAVGRRESLAVFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLADKSGVHIYNLGAGVGSSVLDVVNAFSKACGKPINYHFAPRRDGD 295
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: GALE1_ARATH (UDP-glucose 4-epimerase 1 OS=Arabidopsis thaliana GN=At1g12780 PE=1 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 3.522e-30 Identity = 77/197 (39.09%), Postives = 111/197 (56.35%), Query Frame = 1 Query: 16 TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALER--AQPKKVG--IYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGD 591 T+ + E+MA++ +++SS+ YG+PEK+P E+ +NPYG+ K E+I D K + +++LRYFN +G+ G +GE P+ + A G + L V G DY T DG+ VRDYI V DL D H+ AL + A P K+G YN+GTG+G SV E V A +KA+ I + PRR GD Sbjct: 114 TINLYETMAKYNCKMMVFSSSATVYGQPEKIPCMEDFELKAMNPYGRTKLFLEEIARDIQKAEPEWRIILLRYFNPVGAHESGSIGEDPK---GIPNNLMPYIQQVAVGRLPELNVYGHDYPTEDGSAVRDYIHVMDLADGHIAALRKLFADP-KIGCTAYNLGTGQGTSVLEMVAAFEKASGKKIPIKLCPRRSGD 306
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: GALE_ECOLI (UDP-glucose 4-epimerase OS=Escherichia coli (strain K12) GN=galE PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 7.846e-30 Identity = 79/200 (39.50%), Postives = 105/200 (52.50%), Query Frame = 1 Query: 1 NITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALER-AQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGD 591 N + TL ++ +M V I+SS+ YG+ K+P E P P +PYGK+K M E I+ D K D ++ +LRYFN +G+ P G +GE P+ + A G L + G DY T DGT VRDYI V DL D HV A+E+ A V IYN+G G G SV + V A KA + + PRR GD Sbjct: 99 NNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGI---PNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGD 295
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: GALE_PASMU (UDP-glucose 4-epimerase OS=Pasteurella multocida GN=galE PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.025e-29 Identity = 80/202 (39.60%), Postives = 112/202 (55.45%), Query Frame = 1 Query: 1 NITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSKNS-DMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQ-PKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYA 597 N + +LV+++ M + GV ++SS+ YG+PE +PITE NPYG +K M E I+ D +K + + ++ ILRYFN +G+ G +GE P + A G + L V G+DY T DGT VRDYI V DL H+KAL+R + + IYN+GTG G SV + V+A +K I RRPGD A Sbjct: 99 NNVTGSLVLIQEMKKAGVWNFVFSSSATVYGDPEIIPITESCKVGGTTNPYGTSKFMVEQILKDIAKATPEFSITILRYFNPVGAHESGLIGEDPNGI---PNNLLPYISQVAIGKLPQLSVFGSDYETHDGTGVRDYIHVVDLAIGHLKALDRHEGDAGLHIYNLGTGSGYSVLDMVKAFEKVNDIKIPYKLVDRRPGDIA 297
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: GALE_ERWAM (UDP-glucose 4-epimerase OS=Erwinia amylovora GN=galE PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.338e-29 Identity = 79/202 (39.11%), Postives = 108/202 (53.47%), Query Frame = 1 Query: 1 NITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP-QAPINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQP-KKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYA 597 N + TLV+LE M GV+ I+SS+ YG +P E TP +PYG +K M E I+ D++K N + + LRYFN +G+ G++GE P + A G + L + G DY T DGT VRDYI V DL + H+KAL+ + YN+G GKG SV E V+A +KA+ + PRR GD A Sbjct: 99 NNVTGTLVLLEEMRSAGVNQFIFSSSATVYGADAPVPYVETTPIGGTTSPYGTSKLMVEQILRDYAKANPEFKTIALRYFNPVGAHESGQMGEDPNGI---PNNLLPYIAQVAIGRLEKLGIFGDDYPTEDGTGVRDYIHVMDLAEGHLKALDHLSAIEGYKAYNLGAGKGYSVLEMVKAFEKASGGTVAYQISPRRDGDLA 297
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: GALE_HAEIN (UDP-glucose 4-epimerase OS=Haemophilus influenzae GN=galE PE=3 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 2.283e-29 Identity = 81/202 (40.10%), Postives = 113/202 (55.94%), Query Frame = 1 Query: 1 NITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQ-PKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYA 597 N + TLV+++ M + GV ++SS+ YG+P+ +PITE+ NPYG +K M E I+ D +K ++ ILRYFN +G+ G +GE P + A G +A L V G+DY T DGT VRDYI V DL H+KAL+R + + IYN+GTG G SV + V+A +KA + I RR GD A Sbjct: 99 NNVAGTLVLIQEMKKAGVWNFVFSSSATVYGDPKIIPITEDCEVGGTTNPYGTSKYMVEQILRDTAKAEPKFSMTILRYFNPVGAHESGLIGEDPNGI---PNNLLPYISQVAIGKLAQLSVFGSDYDTHDGTGVRDYIHVVDLAVGHLKALQRHENDAGLHIYNLGTGHGYSVLDMVKAFEKANNITIAYKLVERRSGDIA 297 The following BLAST results are available for this feature:
BLAST of CX288562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288562 ID=CX288562; Name=CX288562; organism=Citrus clementina; type=EST; length=597bpback to top |