CX288562
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: GALE_NEIMB (UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup B GN=galE PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.894e-29 Identity = 77/202 (38.12%), Postives = 115/202 (56.93%), Query Frame = 1 Query: 1 NITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALE-RAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYA 597 N S +LV+ E MAR GV ++++SS+ YG+P K+P TE+ P +PYG +K M E I+ D K + ++++LRYFN IG+ G +GE +P + + C A G + L V G DY T DGT +RDYI V DL + HV A++ ++ + N+G+G+ SV E + A + A+ I +PRR GD A Sbjct: 100 NNVSGSLVLAEEMARAGVFSIVFSSSATVYGDPGKVPYTEDMPPGDTTSPYGASKSMVERILTDIQKADPRWSMILLRYFNPIGAHESGLIGE--QPNGIPNNLLPYIC-QVAAGKLPQLAVFGDDYPTPDGTGMRDYIHVMDLAEGHVAAMQAKSNVAGTHLLNLGSGRASSVLEIIRAFEAASGLTIPYEVKPRRAGDLA 298
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: GALE_STRLI (UDP-glucose 4-epimerase OS=Streptomyces lividans GN=galE PE=3 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 5.086e-29 Identity = 78/199 (39.20%), Postives = 104/199 (52.26%), Query Frame = 1 Query: 1 NITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYA 597 N T+ +LE+M GV L++SST ATYGEPE++PI E P P NPYG +K + +I + + + + YFNV G++ RL P L A+G + V G DY T D TCVRDYI V DL +AH+ A+ R + I N+G G G SV+E VE ++ T I I PRR D A Sbjct: 95 NNVGGTMALLEAMRGAGVRRLVFSSTAATYGEPEQVPIVESAPTRPTNPYGASKLAVDHMITGEAAAHGLGAVSVPYFNVAGANRGVRLVHDPESHL------IPLVLQVAQGRREAISVYGDDYPTPD-TCVRDYIHVADLAEAHLLAVRRRPGNEHLICNLGNGNGFSVREVVETVRRVTGHPIPEIMAPRRGRDPA 286
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: GALE_NEIMA (UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup A GN=galE PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.086e-29 Identity = 77/202 (38.12%), Postives = 115/202 (56.93%), Query Frame = 1 Query: 1 NITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALE-RAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYA 597 N S +LV+ E MAR GV ++++SS+ YG+P K+P TE+ P +PYG +K M E I+ D K + ++++LRYFN IG+ G +GE +P + + C A G + L V G DY T DGT +RDYI V DL + HV A++ ++ + N+G+G+ SV E + A + A+ I +PRR GD A Sbjct: 100 NNVSGSLVLAEEMARAGVFSIVFSSSATVYGDPGKVPYTEDMPLGDTTSPYGTSKSMVERILTDIQKADPRWSMILLRYFNPIGAHESGLIGE--QPNGIPNNLLPYIC-QVASGRLPQLSVFGGDYPTPDGTGMRDYIHVMDLAEGHVAAMQAKSNVAGTHLLNLGSGRASSVLEIIRAFEAASGLTIPYEVKPRRAGDLA 298
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: GALE_NEIMC (UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup C GN=galE PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.133e-28 Identity = 78/202 (38.61%), Postives = 114/202 (56.44%), Query Frame = 1 Query: 1 NITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE-TPQAPINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALE-RAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYA 597 N S +LV+ E MAR GV +++SS+ YG+P K+P TE+ P +PYG +K M E I+ D K + +V++LRYFN IG+ G +GE +P + + C A G + L V G DY T DGT +RDYI V DL + HV A++ ++ + N+G+G+ SV E + A + A+ I +PRR GD A Sbjct: 100 NNVSGSLVLAEEMARAGVFKIVFSSSATVYGDPGKVPYTEDMQPGDTTSPYGTSKSMVERILSDIQKADPRWSVILLRYFNPIGAHESGLIGE--QPNGIPNNLLPYIC-QVAAGKLPQLAVFGGDYPTPDGTGMRDYIHVMDLAEGHVAAMQAKSNVAGTHLLNLGSGRASSVLEIIRAFEAASGLTIPYEVKPRRAGDLA 298
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: GALE_NEIGO (UDP-glucose 4-epimerase OS=Neisseria gonorrhoeae GN=galE PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.133e-28 Identity = 77/202 (38.12%), Postives = 114/202 (56.44%), Query Frame = 1 Query: 1 NITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET-PQAPINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALE-RAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYA 597 N +LV+ E MAR GV +++SS+ YG+ EK+P TE+ P NPYG +K M E ++ D K + +V++LRYFN IG+ G +GE P + + C A G + L V G DY T DGT +RDYI V DL + H+ A++ + V ++N+G+G+ SV E + A + A+ +I +PRR GD A Sbjct: 99 NNVYGSLVLAEEMARAGVLKIVFSSSATVYGDAEKVPYTEDMRPGDTANPYGASKAMVERMLTDIQKADPRWSVILLRYFNPIGAHESGLIGEQPNGV--PNNLLPYIC-QVASGRLPQLSVFGGDYPTPDGTGMRDYIHVMDLAEGHIAAMKAKGGVAGVHLFNLGSGRAYSVLEIIRAFEAASGLHIPYRIQPRRAGDLA 297
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: GALE_YEREN (UDP-glucose 4-epimerase OS=Yersinia enterocolitica GN=galE PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.933e-28 Identity = 77/201 (38.31%), Postives = 106/201 (52.74%), Query Frame = 1 Query: 1 NITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP-QAPINPYGKAKKMAEDIILDFS-KNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYA 597 N ++ +LE M V LI+SS+ YGEPE +P+TE+ NPYG +K M E I+ DFS + D ++ LRYFN +G+ P G +GE P + + A G ++ L V G DY T DG+ +RDYI V DL + H+ L IYN+GTG G SV ++ ++ T NI RRPGD A Sbjct: 99 NNVVGSITLLEEMCLANVKKLIFSSSATVYGEPEFVPLTEKARIGGTTNPYGTSKVMVEQILKDFSLAHPDYSITALRYFNPVGAHPSGLIGEDPNGK---PNNLLPFITQVAIGKLSKLLVYGNDYDTPDGSGIRDYIHVMDLAEGHLSTLINL-TSGFRIYNLGTGVGYSVLHMIKEFERITGKNIPFDIVSRRPGDIA 295
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: GALE_STRTR (UDP-glucose 4-epimerase OS=Streptococcus thermophilus GN=galE PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.933e-28 Identity = 76/198 (38.38%), Postives = 109/198 (55.05%), Query Frame = 1 Query: 1 NITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQP-KKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGD 591 N T+ + +LE M GV +++SST ATYG PE++PI E TPQ PINPYG++K M E I+ + + + LRYFNV G++ RL R + A+G+ + + G DY+T DGT VRDY+ DL DAH+ A+E + + +N+G+ G S + +EA +K T I RRPGD Sbjct: 94 NNTAGMVKLLEVMNECGVKYIVFSSTAATYGIPEEIPILETTPQNPINPYGESKLMMETIMKWSDQAYGIKYVPLRYFNVAGANLMVRL-----VRTRSETHLLPIILQVAQGVREKIMIFGDDYNTPDGTNVRDYVHPFDLADAHLLAVEYLRKGNESTAFNLGSSTGFSNLQILEAARKVTGKEIPAEKADRRPGD 286
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: GALE1_CYATE (UDP-glucose 4-epimerase GEPI42 OS=Cyamopsis tetragonoloba PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.933e-28 Identity = 69/196 (35.20%), Postives = 109/196 (55.61%), Query Frame = 1 Query: 16 TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERA-QPKKVG--IYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGD 591 T+ + + M++ L+ SS+ YG+P+++P E++ +NPYG++K E++ D + ++ +++LRYFN +G+ G++GE PR + A + L + G DY T DGT +RDYI V DL D H+ AL + +G YN+GTG+G SV E V A +KA+ I + PRRPGD Sbjct: 117 TINLFQVMSKFNCKKLVISSSATVYGQPDQIPCVEDSNLHAMNPYGRSKLFVEEVARDIQRAEAEWRIILLRYFNPVGAHESGQIGEDPR---GLPNNLMPYIQQVAVARLPELNIYGHDYPTKDGTAIRDYIHVMDLADGHIAALRKLFTTDNIGCTAYNLGTGRGTSVLEMVAAFEKASGKKIPIKMCPRRPGD 309
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: GALE_MOUSE (UDP-glucose 4-epimerase OS=Mus musculus GN=Gale PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.297e-28 Identity = 79/200 (39.50%), Postives = 110/200 (55.00%), Query Frame = 1 Query: 10 SNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSKNSDMA--VMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQPK-KVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYA 597 + T+ +LE M HGV L++SS+ YG P+ +P+ E P NPYGK+K E++I D + +D A ++LRYFN IG+ GR+GE P+ + A G L V G DY+T DGT VRDYI V DL H+ AL++ + + YN+GTG G SV + V+A +KA+ I RR GD A Sbjct: 109 TGTIQLLEIMRAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCR-ADTAWNAVLLRYFNPIGAHASGRIGEDPQGI---PNNLMPYVSQVAIGRREALNVFGDDYATEDGTGVRDYIHVVDLAKGHIAALKKLKEQCGCRTYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVA 304
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: GALE_PASHA (UDP-glucose 4-epimerase OS=Pasteurella haemolytica GN=galE PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.305e-28 Identity = 77/202 (38.12%), Postives = 111/202 (54.95%), Query Frame = 1 Query: 1 NITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSKN-SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQ-PKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYA 597 N + ++V++E M + V+T+++SS+ YG+P+ +PI E P NPYG +K M E I+ D K ++ ++LRYFN +G+ G +GE P + A G + L V G DY+T DGT VRDYI V DL H+KAL++ Q +YN+GTG G SV + V+A + A I RRPGD A Sbjct: 99 NNVTGSIVLVEEMLKANVNTIVFSSSATVYGDPQIIPIVESCPVGGTTNPYGTSKYMVERILEDTVKAFPQLSAVVLRYFNRVGAHESGLIGEDPNGI---PNNLMPFISQVAVGKLPQLSVFGGDYNTHDGTGVRDYIHVVDLALGHLKALDKHQNDAGFHVYNLGTGTGYSVLDMVKAFEAANGITIPYKVVDRRPGDIA 297 The following BLAST results are available for this feature:
BLAST of CX288562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288562 ID=CX288562; Name=CX288562; organism=Citrus clementina; type=EST; length=597bpback to top |