CX288571
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288571 vs. ExPASy Swiss-Prot
Match: HACE1_XENLA (E3 ubiquitin-protein ligase HACE1 OS=Xenopus laevis GN=hace1 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.915e-22 Identity = 65/157 (41.40%), Postives = 86/157 (54.78%), Query Frame = 1 Query: 1 PFSNAFYRGLTDLISPSWLKLFNASEFNQLLSGGRHDIDVDDLRKNTRYTGGYSEGSRTIKLFWEVVEGFEPKERCMLLKFVTSCSRAPLLGFKHLQ-----PSFTIHKVACDSSLWAVIGGQDVERLPSASTCYNTLKLPTYKRSSTLKAKLLYAI 456 P N F +G I PS ++LF+ E LLSG +IDV+D KNT YT GY + I+ FWEVV+ +ER +LL+FVT SR P GF ++ +FTI VA ++L LP++STC N LKLP Y LK +LL A+ Sbjct: 790 PQINGFLQGFHMFIPPSLIQLFDEYELELLLSG-MPEIDVNDWMKNTEYTSGYERDDQVIQWFWEVVQELTQEERVLLLQFVTGSSRVPHGGFAYIMGGSGLQNFTIAAVAYTANL-----------LPTSSTCINMLKLPEYPSKEILKDRLLVAL 934
BLAST of CX288571 vs. ExPASy Swiss-Prot
Match: HACE1_XENTR (E3 ubiquitin-protein ligase HACE1 OS=Xenopus tropicalis GN=hace1 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.678e-22 Identity = 65/157 (41.40%), Postives = 85/157 (54.14%), Query Frame = 1 Query: 1 PFSNAFYRGLTDLISPSWLKLFNASEFNQLLSGGRHDIDVDDLRKNTRYTGGYSEGSRTIKLFWEVVEGFEPKERCMLLKFVTSCSRAPLLGFKHLQ-----PSFTIHKVACDSSLWAVIGGQDVERLPSASTCYNTLKLPTYKRSSTLKAKLLYAI 456 P N F +G I PS ++LF+ E LLSG +IDV+D KNT YT GY + I+ FWEVV+ +ER +LL+FVT SR P GF ++ +FTI VA +L LP++STC N LKLP Y LK +LL A+ Sbjct: 758 PQINGFLQGFHMFIPPSLIQLFDEYELELLLSG-MPEIDVNDWMKNTEYTSGYERDDQVIQWFWEVVQELTQEERVLLLQFVTGSSRVPHGGFAYIMGGSGLQNFTIAAVAYTPNL-----------LPTSSTCINMLKLPEYPSKEILKDRLLVAL 902
BLAST of CX288571 vs. ExPASy Swiss-Prot
Match: UPL1_ARATH (E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana GN=UPL1 PE=1 SV=3) HSP 1 Score: 103.219 bits (256), Expect = 1.139e-21 Identity = 65/159 (40.88%), Postives = 86/159 (54.09%), Query Frame = 1 Query: 1 PFSNAFYRGLTDLISPSWLKLFNASEFNQLLSGGRHDIDVDDLRKNTRYTGGYSEGSRTIKLFWEVVEGFEPKERCMLLKFVTSCSRAPLLGFKHLQPSFTIHKVACDSSLWAVIGGQDVERLPSASTCYNTLKLPTYKRSSTLKAKLLYAI-SSNAGF 474 P NAF G +LI + +FN E L+SG +ID DDL+ NT YT Y+ GS I FWEVV+ F ++ L+FVT S+ PL GFK LQ ++ + A ERLPSA TC+N L LP Y+ L+ +LL AI ++ GF Sbjct: 3528 PQINAFLEGFNELIPRELVSIFNDKELELLISG-LPEIDFDDLKANTEYTS-YTAGSPVIHWFWEVVKAFSKEDMARFLQFVTGTSKVPLEGFKALQGISGPQRLQIHKAYGA------PERLPSAHTCFNQLDLPEYQSKEQLQERLLLAIHEASEGF 3678
BLAST of CX288571 vs. ExPASy Swiss-Prot
Match: TOM1_NEUCR (E3 ubiquitin-protein ligase TOM1-like OS=Neurospora crassa GN=B11B22.010 PE=3 SV=3) HSP 1 Score: 103.219 bits (256), Expect = 1.139e-21 Identity = 67/170 (39.41%), Postives = 91/170 (53.53%), Query Frame = 1 Query: 13 AFYRGLTDLISPSWLKLFNASEFNQLLSGGRHDIDVDDLRKNTRYTGGYSEGSRTIKLFWEVVEGFEPKERCMLLKFVTSCSRAPLLGFKHLQ-----PSFTIHKVACDSSLWAVIGGQDVERLPSASTCYNTLKLPTYKRSSTLKAKLLYAISSNAGFELS*GSDYFCF 507 AF G ++I + +FN E L+SG DID+DD + NT Y YS G+ I+ FW V F+ +E LL+FVT S+ PL GFK L+ F IH+ G +D RLPS+ TC+N L LP Y+ TL+++LL AI++ GSDYF F Sbjct: 3877 AFLTGFHEIIPEELIAIFNEQELELLISG-LPDIDIDDWKANTEYHN-YSAGAPQIQWFWRAVRSFDKEELAKLLQFVTGTSKVPLNGFKELEGMNGVSRFNIHR---------DYGSKD--RLPSSHTCFNQLDLPEYENYETLRSQLLKAITA--------GSDYFGF 4025
BLAST of CX288571 vs. ExPASy Swiss-Prot
Match: PUB3_SCHPO (E3 ubiquitin-protein ligase pub3 OS=Schizosaccharomyces pombe GN=pub3 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.139e-21 Identity = 61/160 (38.12%), Postives = 85/160 (53.12%), Query Frame = 1 Query: 10 NAFYRGLTDLISPSWLKLFNASEFNQLLSGGRHDIDVDDLRKNTRYTGGYSEGSRTIKLFWEVVEGFEPKERCMLLKFVTSCSRAPLLGFKHLQPS-----FTIHKVACDSSLWAVIGGQDVERLPSASTCYNTLKLPTYKRSSTLKAKLLYAISSNAGF 474 NAFY G +L+SP + +F+ E +LL GG D+DV+D + +T Y Y IK FWE++ G++ ++R LL+F T SR P+ GF+ LQ S FTI K ++LP A TC+N L LP Y TL KL A+ + GF Sbjct: 638 NAFYSGFVELVSPDLVNVFDEREL-ELLIGGISDVDVEDWKSHTEYRT-YIATDPVIKWFWEIIAGWKNEDRSKLLQFATGTSRIPVNGFRDLQGSDGPRKFTIEKAGTP------------DQLPVAHTCFNRLDLPDYPSKDTLHEKLSLAVENTVGF 783
BLAST of CX288571 vs. ExPASy Swiss-Prot
Match: HACE1_MOUSE (E3 ubiquitin-protein ligase HACE1 OS=Mus musculus GN=Hace1 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.943e-21 Identity = 66/157 (42.04%), Postives = 84/157 (53.50%), Query Frame = 1 Query: 1 PFSNAFYRGLTDLISPSWLKLFNASEFNQLLSGGRHDIDVDDLRKNTRYTGGYSEGSRTIKLFWEVVEGFEPKERCMLLKFVTSCSRAPLLGFKHLQ-----PSFTIHKVACDSSLWAVIGGQDVERLPSASTCYNTLKLPTYKRSSTLKAKLLYAI 456 P NAF +G I PS ++LF+ E LLSG +IDV+D KNT YT GY I+ FWEVVE +ER +LL+FVT SR P GF ++ +FTI V +L LP++STC N LKLP Y LK +LL A+ Sbjct: 755 PQINAFLQGFHMFIPPSLIQLFDEYELELLLSG-MPEIDVNDWIKNTEYTSGYEREDPVIQWFWEVVEDITQEERVLLLQFVTGSSRVPHGGFANIMGGSGLQNFTIAAVPYTPNL-----------LPTSSTCINMLKLPEYPSKEILKDRLLVAL 899
BLAST of CX288571 vs. ExPASy Swiss-Prot
Match: HACE1_HUMAN (E3 ubiquitin-protein ligase HACE1 OS=Homo sapiens GN=HACE1 PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 2.538e-21 Identity = 66/157 (42.04%), Postives = 83/157 (52.87%), Query Frame = 1 Query: 1 PFSNAFYRGLTDLISPSWLKLFNASEFNQLLSGGRHDIDVDDLRKNTRYTGGYSEGSRTIKLFWEVVEGFEPKERCMLLKFVTSCSRAPLLGFKHLQ-----PSFTIHKVACDSSLWAVIGGQDVERLPSASTCYNTLKLPTYKRSSTLKAKLLYAI 456 P NAF +G I PS ++LF+ E LLSG +IDV D KNT YT GY I+ FWEVVE +ER +LL+FVT SR P GF ++ +FTI V +L LP++STC N LKLP Y LK +LL A+ Sbjct: 755 PQINAFLQGFHMFIPPSLIQLFDEYELELLLSG-MPEIDVSDWIKNTEYTSGYEREDPVIQWFWEVVEDITQEERVLLLQFVTGSSRVPHGGFANIMGGSGLQNFTIAAVPYTPNL-----------LPTSSTCINMLKLPEYPSKEILKDRLLVAL 899
BLAST of CX288571 vs. ExPASy Swiss-Prot
Match: PUB2_SCHPO (E3 ubiquitin-protein ligase pub2 OS=Schizosaccharomyces pombe GN=pub2 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.259e-20 Identity = 62/160 (38.75%), Postives = 85/160 (53.12%), Query Frame = 1 Query: 10 NAFYRGLTDLISPSWLKLFNASEFNQLLSGGRHDIDVDDLRKNTRYTGGYSEGSRTIKLFWEVVEGFEPKERCMLLKFVTSCSRAPLLGFKHLQPS-----FTIHKVACDSSLWAVIGGQDVERLPSASTCYNTLKLPTYKRSSTLKAKLLYAISSNAGF 474 NA GL +LI S L++FN +E + LL+G R DIDV D ++ T Y Y+E + FWE++ + P+++ LL+F T SR PL GFK + S FTI KV + +LP A TC+N L +P Y L+ KL AI AGF Sbjct: 523 NALKGGLNELIPDSVLQIFNENELDTLLNGKR-DIDVQDWKRFTDYRS-YTETDDIVIWFWELLSEWSPEKKAKLLQFATGTSRLPLSGFKDMHGSDGPRKFTIEKVG------------HISQLPKAHTCFNRLDIPPYNSKEELEQKLTIAIQETAGF 668
BLAST of CX288571 vs. ExPASy Swiss-Prot
Match: PUB1_SCHPO (E3 ubiquitin-protein ligase pub1 OS=Schizosaccharomyces pombe GN=pub1 PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 8.163e-20 Identity = 59/160 (36.88%), Postives = 85/160 (53.12%), Query Frame = 1 Query: 10 NAFYRGLTDLISPSWLKLFNASEFNQLLSGGRHDIDVDDLRKNTRYTGGYSEGSRTIKLFWEVVEGFEPKERCMLLKFVTSCSRAPLLGFKHLQPS-----FTIHKVACDSSLWAVIGGQDVERLPSASTCYNTLKLPTYKRSSTLKAKLLYAISSNAGF 474 NAF+ G ++LI + +F+ E +LL GG +ID++D +K+T Y YSE + IK FWE+++ + +++ LL+F T SR P+ GFK LQ S FTI K + +LP A TC+N L LP Y L KL A+ GF Sbjct: 619 NAFHEGFSELIPQELINVFDEREL-ELLIGGISEIDMEDWKKHTDYRS-YSENDQIIKWFWELMDEWSNEKKSRLLQFTTGTSRIPVNGFKDLQGSDGPRKFTIEKAG------------EPNKLPKAHTCFNRLDLPPYTSKKDLDHKLSIAVEETIGF 764
BLAST of CX288571 vs. ExPASy Swiss-Prot
Match: TOM1_YEAST (E3 ubiquitin-protein ligase TOM1 OS=Saccharomyces cerevisiae GN=TOM1 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.066e-19 Identity = 62/157 (39.49%), Postives = 83/157 (52.87%), Query Frame = 1 Query: 16 FYRGLTDLISPSWLKLFNASEFNQLLSGGRHDIDVDDLRKNTRYTGGYSEGSRTIKLFWEVVEGFEPKERCMLLKFVTSCSRAPLLGFKHLQPSFTIHKVACDSSLWAVIGGQDVERLPSASTCYNTLKLPTYKRSSTLKAKLLYAIS-SNAGFELS 483 F G LIS + +F+ E L+SG DIDVDD + NT Y Y+ + + FW V F+ +ER LL+FVT S+ PL GFK L + C S+ G ERLPS+ TC+N L LP Y+ TL+ LL AI+ + GF L+ Sbjct: 3120 FLVGFYALISKDLITIFDEQELELLISG-LPDIDVDDWKNNTTYVN-YTATCKEVSYFWRAVRSFDAEERAKLLQFVTGTSKVPLNGFKELSGVNGV----CKFSIHRDFGSS--ERLPSSHTCFNQLNLPPYESYETLRGSLLLAINEGHEGFGLA 3268 The following BLAST results are available for this feature:
BLAST of CX288571 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288571 ID=CX288571; Name=CX288571; organism=Citrus clementina; type=EST; length=630bpback to top |