CX288572
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: GLYR1_DROME (Putative oxidoreductase GLYR1 homolog OS=Drosophila melanogaster GN=CG4747 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 4.774e-31 Identity = 66/180 (36.67%), Postives = 104/180 (57.78%), Query Frame = 3 Query: 12 ISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLE-QICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEVGNGAKMKLVVNMIMGCMMNTFSEGLVLAEK 548 I +L+ G KV VWNRT+ KC GA V +P +V++ + ++DP A +VF GVL+ + K Y++MST+D +TS+ I I G +LEA + GS+Q A G L+IL+ G++++++E S I K FFLG +GN K+ L++ I+G + +E L LA++ Sbjct: 330 IVKDLIYTGHKVVVWNRTIDKCQPFAEAGAEVKDTPMDVVEAADVIFCCVSDPKGAKDLVFGNCGVLQLKDLNNKAYVEMSTIDPDTSLDIGEGIKQCNGRYLEAQIHGSRQEAAEGMLIILAGGDRSVFEECHSCFKTIAKNTFFLGNIGNACKVNLILQTILGVSLVGLAEALALADR 509
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: GLYR1_DROPS (Putative oxidoreductase GLYR1 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA18401 PE=3 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 8.144e-31 Identity = 69/180 (38.33%), Postives = 102/180 (56.67%), Query Frame = 3 Query: 12 ISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLE-QICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEVGNGAKMKLVVNMIMGCMMNTFSEGLVLAEK 548 I +L+ G KV VWNRT+ KC V GA V +P +V++ I ++DP A +VF GVL+ + K Y++MSTVD +TS+ I I G +LEA + GS+Q A G L+IL+ G++ +++E S I K FFLG VGN K+ L++ I + +E L LA++ Sbjct: 340 IVKDLIYTGHKVVVWNRTIDKCQPFVEAGAEVKDTPMDVVEAADIIFCCVSDPKGAKDLVFGNCGVLQLKDLRNKAYVEMSTVDPDTSLDIGEGIKQCNGRYLEAQIHGSRQEAADGMLIILAGGDRTVFEECHSCFKTIAKNTFFLGNVGNACKVNLILQTIQAVSLVGLAEALALADR 519
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: YFJR_BACSU (Uncharacterized oxidoreductase yfjR OS=Bacillus subtilis GN=yfjR PE=3 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 6.910e-22 Identity = 63/184 (34.24%), Postives = 97/184 (52.72%), Query Frame = 3 Query: 12 ISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEVGNGAK-MKLVVNMIMGCMMNTFSEGLVLAEKSGLD 560 I+ N+L+ G+++TV+NRT K ++LV GA +P K I I MLAD + +V F + G+LE + +I MST+ E S K++ A KG FL APV G A L I++AG A L+ + ++ F +GE A K+ +N ++ M+ SE ++ EK GL+ Sbjct: 15 IARNVLQAGYELTVYNRTKQKTEDLVTEGAQAADTPRLAAKSADIVITMLADDDSVSTVTFGEDGLLEGLAENGIHISMSTISVEFSEKLAAAHAEKGQFFLAAPVLGRPDAAAKAALRIITAGPAEAKQAAKPLLDSLSQQIFDVGEESKTANAAKISINFLLVSMLEALSESFLMMEKYGLE 198
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: GARR_ECOLI (2-hydroxy-3-oxopropionate reductase OS=Escherichia coli (strain K12) GN=garR PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.539e-21 Identity = 57/186 (30.65%), Postives = 97/186 (52.15%), Query Frame = 3 Query: 6 RAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEVGNGAKMKLVVNMIMGCMMNTFSEGLVLAEKSGLDP 563 + +S NLL+ G+ + V +R +++A GA + + ++C + I ML + V + G++E PG IDMS++ S +IS A+ +KG L+APVSG + A G L ++ G+KA++D+ + + GE+G G KL +I+ + SE L LA K+G++P Sbjct: 13 KPMSKNLLKAGYSLVVADRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISEALKAKGIDMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNP 198
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: GARR_ECOL6 (2-hydroxy-3-oxopropionate reductase OS=Escherichia coli O6 GN=garR PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.539e-21 Identity = 57/186 (30.65%), Postives = 97/186 (52.15%), Query Frame = 3 Query: 6 RAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEVGNGAKMKLVVNMIMGCMMNTFSEGLVLAEKSGLDP 563 + +S NLL+ G+ + V +R +++A GA + + ++C + I ML + V + G++E PG IDMS++ S +IS A+ +KG L+APVSG + A G L ++ G+KA++D+ + + GE+G G KL +I+ + SE L LA K+G++P Sbjct: 13 KPMSKNLLKAGYSLVVADRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISEALKAKGIDMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNP 198
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: 3HIDH_DICDI (Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=hibA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.702e-20 Identity = 54/183 (29.51%), Postives = 92/183 (50.27%), Query Frame = 3 Query: 15 SMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEVGNGAKMKLVVNMIMGCMMNTFSEGLVLAEKSGLDP 563 ++NL++ G + V++ + + L GA + SPAEV K+ + + ML A +V + G+ + + PG +D ST+D T+ +++ L+ PVSG AE G L + G + ++ A + L +GK G+VG G K+ N+++G M SE + L K G+DP Sbjct: 38 AINLIKKGHNLIVFDMSKDNMNRLKEKGAKIANSPAEVAKEADVIVTMLPASAHVKNVYCGENGIFQTVRPGTLLLDSSTIDPATAREVASIAKKHQSTMLDCPVSGGTGGAEAGTLTFMVGGSEQDFNTAKTYLECMGKNIVHCGDVGTGQVAKVCNNLVLGISMIAVSEAMNLGVKQGMDP 220
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: 3HIDH_MOUSE (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Mus musculus GN=Hibadh PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.792e-20 Identity = 56/184 (30.43%), Postives = 92/184 (50.00%), Query Frame = 3 Query: 12 ISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEVGNGAKMKLVVNMIMGCMMNTFSEGLVLAEKSGLDP 563 ++ NL+++G+ + +++ C E G V SPAEV +K I ML A+ V G+L+++ G ID ST+D S ++++ + G F++APVSG A +G L + G + + A L +G + G VG G K+ NM++ M +E + L +SGLDP Sbjct: 53 MAKNLMKHGYPLILYDVFPDVCKEFKEAGEQVASSPAEVAEKADRIITMLPSSMNAVEVYSGANGILKKVKKGSLLIDSSTIDPSVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLECMGSNVVYCGAVGTGQSAKICNNMLLAISMIGTAEAMNLGIRSGLDP 236
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: 3HIDH_RAT (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Hibadh PE=1 SV=3) HSP 1 Score: 96.6709 bits (239), Expect = 8.447e-20 Identity = 54/184 (29.35%), Postives = 93/184 (50.54%), Query Frame = 3 Query: 12 ISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEVGNGAKMKLVVNMIMGCMMNTFSEGLVLAEKSGLDP 563 ++ NL+++G+ + +++ C E G V SPA+V +K I ML ++ V G+L+++ G ID ST+D S ++++ + G F++APVSG A +G L + G + + A L +G + G VG+G K+ NM++ M +E + L +SGLDP Sbjct: 53 MAKNLIKHGYPLILYDVFPDVCKEFKEAGEQVASSPADVAEKADRIITMLPSSMNSIEVYSGANGILKKVKKGSLLIDSSTIDPSVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVENEFAAAQELLGCMGSNVLYCGAVGSGQSAKICNNMLLAISMIGTAEAMNLGIRSGLDP 236
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: 3HIDH_PONAB (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Pongo abelii GN=HIBADH PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.717e-18 Identity = 53/184 (28.80%), Postives = 90/184 (48.91%), Query Frame = 3 Query: 12 ISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEVGNGAKMKLVVNMIMGCMMNTFSEGLVLAEKSGLDP 563 ++ NL+++G+ + +++ C E G V SPA+V +K I ML A+ G+L+++ G ID ST+D S ++++ + G F++APVSG A +G L + G + + A L +G + G VG G K+ NM++ M +E + L + GLDP Sbjct: 54 MAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDP 237
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: 3HIDH_HUMAN (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Homo sapiens GN=HIBADH PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 2.717e-18 Identity = 53/184 (28.80%), Postives = 90/184 (48.91%), Query Frame = 3 Query: 12 ISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEVGNGAKMKLVVNMIMGCMMNTFSEGLVLAEKSGLDP 563 ++ NL+++G+ + +++ C E G V SPA+V +K I ML A+ G+L+++ G ID ST+D S ++++ + G F++APVSG A +G L + G + + A L +G + G VG G K+ NM++ M +E + L + GLDP Sbjct: 54 MAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDP 237 The following BLAST results are available for this feature:
BLAST of CX288572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288572 ID=CX288572; Name=CX288572; organism=Citrus clementina; type=EST; length=564bpback to top |