CX288572
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: 3HIDH_BOVIN (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Bos taurus GN=HIBADH PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.717e-18 Identity = 52/184 (28.26%), Postives = 91/184 (49.46%), Query Frame = 3 Query: 12 ISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEVGNGAKMKLVVNMIMGCMMNTFSEGLVLAEKSGLDP 563 ++ NL+++G+ + +++ C E + G V SPA+V +K I ML A+ G+L+++ G ID ST+D S ++++ + G F++APVSG A +G L + G + + A L +G + G VG G K+ N+++ M +E + L + GLDP Sbjct: 54 MAKNLMKHGYPLIIYDVFPDACKEFLDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPMVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEEEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNLLLAISMIGTAEAMNLGIRLGLDP 237
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: YKWC_BACSU (Uncharacterized oxidoreductase ykwC OS=Bacillus subtilis GN=ykwC PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.549e-18 Identity = 52/186 (27.96%), Postives = 94/186 (50.54%), Query Frame = 3 Query: 6 RAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEVGNGAKMKLVVNMIMGCMMNTFSEGLVLAEKSGLDP 563 ++++ ++L +G V V+ RT K + ++ GA + ++ K+ + I M+ P+ V F G++E G IDM+T + KI+ A K L+APVSG A+ G L I+ GEK ++ + +++G+ + G G+G K+ + + M +E + A+KSGL+P Sbjct: 15 KSMASHILNDGHPVLVYTRTKEKAESILQKGAIWKDTVKDLSKEADVIITMVGYPSDVEEVYFGSNGIIENAKEGAYLIDMTTSKPSLAKKIAEAAKEKALFALDAPVSGGDIGAQNGTLAIMVGGEKEAFEACMPIFSLMGENIQYQGPAGSGQHTKMCNQIAIAAGMIGVAEAMAYAQKSGLEP 200
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: 3HIDH_CAEEL (Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Caenorhabditis elegans GN=B0250.5 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.053e-18 Identity = 54/184 (29.35%), Postives = 93/184 (50.54%), Query Frame = 3 Query: 12 ISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLV-ILSAGEKALYDEAISALNVIGKKAFFLGEVGNGAKMKLVVNMIMGCMMNTFSEGLVLAEKSGLD 560 ++ NL++NG K+ V++ + E A G V PA++ I +L +V + G+ + I PG +D ST+D S+++++A +++AP+SG A+ L ++ AG A + A + L+++GK LG VGNG K+ NM++G M +E + L GLD Sbjct: 16 MARNLIKNGKKLIVYDVNKAVVQEFKAEGCEVAAHPADIAAASKEIITVLPSSPHVKAVYQGEAGIFKTIQPGTLCMDSSTIDQIVSLEVAQAAALLKAEYIDAPISGGVTGAQQATLTFMVGAGNDATFKRAEAVLSLMGKNIVNLGAVGNGTAAKICNNMLLGIQMVAVAETMNLGISMGLD 199
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: 3HIDH_DROME (Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Drosophila melanogaster GN=CG15093 PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 3.924e-17 Identity = 58/183 (31.69%), Postives = 92/183 (50.27%), Query Frame = 3 Query: 12 ISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEVGNGAKMKLVVNMIMGCMMNTFSEGLVLAEKSGLD 560 ++ NL++ G K+ V++ + CD L A GATV +E+ K I ML + A + +D+ + + +ID ST+ + + + I++KG F++APVSG AE L + G +A Y+ + L +GKK G G G KL NM++ M SE + LA + GLD Sbjct: 43 MASNLIKAGHKLHVFDISKPACDGLAAKGATVYAKTSELAKNSDFVITMLPNNAI-VDASYDEM-TADGVNKDTIFIDSSTISPDLVKSLQKKISAKGARFIDAPVSGGVPGAEQATLTFMVGGTEAEYNAVKAVLECMGKKITHCGVYGMGQAAKLCNNMMLAISMIGVSEAMNLAVRQGLD 223
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: MMSB_PSEAE (3-hydroxyisobutyrate dehydrogenase OS=Pseudomonas aeruginosa GN=mmsB PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.322e-16 Identity = 57/184 (30.98%), Postives = 87/184 (47.28%), Query Frame = 3 Query: 12 ISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEVGNGAKMKLVVNMIMGCMMNTFSEGLVLAEKSGLDP 563 ++ NLL+ G +V V++ LV GA S + + + I ML S+ G+L ++ ID ST+ ET+ K++ A +KG L+APVSG A G L + G + A L +G+ F G+ G G K+ NM++G +M +E L L K+GLDP Sbjct: 16 MAANLLKAGHRVNVFDLQPKAVLGLVEQGAQGADSALQCCEGAEVVISMLPAGQHVESLYLGDDGLLARVAGKPLLIDCSTIAPETARKVAEAAAAKGLTLLDAPVSGGVGGARAGTLSFIVGGPAEGFARARPVLENMGRNIFHAGDHGAGQVAKICNNMLLGILMAGTAEALALGVKNGLDP 199
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: GLXR_ECOLI (2-hydroxy-3-oxopropionate reductase OS=Escherichia coli (strain K12) GN=glxR PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.322e-16 Identity = 53/185 (28.65%), Postives = 94/185 (50.81%), Query Frame = 3 Query: 12 ISMNLLRNGFKVTVWNRTLSK-CDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEVGNGAKMKLVVNMIMGCMMNTFSEGLVLAEKSGLDP 563 +++NL R G ++ V T+ DEL++ GA + +V + I M+ D V+F + G + GK +DMS++ + + +R + GG +L+APVSG + A G L I+ G++A+++ ++GK +G G+G K+ +I+ + SE L+ A K+G DP Sbjct: 15 MAINLARAGHQLHV--TTIGPVADELLSLGAVSVETARQVTEASDIIFIMVPDTPQVEEVLFGENGCTKASLKGKTIVDMSSISPIETKRFARQVNELGGDYLDAPVSGGEIGAREGTLSIMVGGDEAVFERVKPLFELLGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALLFASKAGADP 197
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: Y229_SYNY3 (Uncharacterized oxidoreductase slr0229 OS=Synechocystis sp. (strain PCC 6803) GN=slr0229 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 9.664e-16 Identity = 52/186 (27.96%), Postives = 90/186 (48.39%), Query Frame = 3 Query: 12 ISMNLLRNGFKVTVWNRTLSK--CDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEVGNGAKMKLVVNMIMGCMMNTFSEGLVLAEKSGLDP 563 ++ NL++NG++ +NRTL + E G V S A I + + D ++ GG+ E P ID ST+ + +++ + +G FL+APV+G A G L I+ G+ + ++EA+ L IG+K G G+G +KL ++ G +E + L+E+ G+ P Sbjct: 18 MAQNLVKNGYQTVGYNRTLERPSVQEAAKAGVKVVTSIAVAAANADIILTCVGDEKDVQQLILGSGGIAEYAKPQALIIDCSTIGKTAAYELATNLKLQGLRFLDAPVTGGDVGAINGTLTIMVGGDISDFEEALPVLKSIGEKIVHCGPSGSGQAVKLCNQVLCGIHAIAAAEAIQLSEQLGIAP 203
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: Y1503_SHEFN (Uncharacterized oxidoreductase Sfri_1503 OS=Shewanella frigidimarina (strain NCIMB 400) GN=Sfri_1503 PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 5.303e-14 Identity = 50/181 (27.62%), Postives = 90/181 (49.72%), Query Frame = 3 Query: 21 NLLRNGFKVTVWNRTLSKCDELVA-HGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEVGNGAKMKLVVNMIMGCMMNTFSEGLVLAEKSGLD 560 +L++ G VTV+NRT +K + V +G +P + + I + + VV + G++ + G +D +T + + +I+ I FL+APVSG + AE G L ++ G++A +D ++ + A LG VG G K+V + + ++ +EGL A+ +GLD Sbjct: 19 HLVKQGHDVTVYNRTGAKATQWVEQYGGKKADTPKDAAQGQDIVFTCVGNDDDLRQVVLGEHGIVHGMHAGAILVDHTTASADVAREIAAYIEPLNIAFLDAPVSGGQAGAENGALTVMMGGDQAHFDTVKPVISAYSRCAELLGPVGAGQLTKMVNQICIAGVVQGLAEGLHFAKSAGLD 199
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: 3HIDH_ARATH (Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=At4g20930 PE=2 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 1.543e-13 Identity = 58/192 (30.21%), Postives = 88/192 (45.83%), Query Frame = 3 Query: 21 NLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVL---EQICPGKGYIDMSTVDHETSIKISRAITS----------KGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEVGNGAKMKLVVNMIMGCMMNTFSEGLVLAEKSGL 557 NL+R G+KVTV + G + +P EV + + I ML + + V G+L I P +ID ST+D +T+ KIS A+++ + L+APVSG AE G L + G + Y A L +G+ + + G GNG+ K+ N+ M M SE L L + G+ Sbjct: 55 NLIRAGYKVTVHDINRDVMKMFTEMGVSSRETPYEVAQDSEVVITMLPSSSHVMDVYTGTNGLLLGENDIRPAL-FIDSSTIDPQTTRKISLAVSNCNLKEKRDNWEKPVMLDAPVSGGVLAAEAGTLTFMVGGPEDAYLAARPILQSMGRTSIYCGGSGNGSAAKICNNLAMAVSMLGTSEALALGQSLGI 245
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: YIHU_SHIFL (Uncharacterized oxidoreductase yihU OS=Shigella flexneri GN=yihU PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.437e-13 Identity = 51/182 (28.02%), Postives = 85/182 (46.70%), Query Frame = 3 Query: 12 ISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEVGNGAKMKLVVNMIMGCMMNTFSEGLVLAEKSGL 557 ++ NLL+ G ++ V++ LV GAT +PA+ K I ML + +V+F + GV E + IDMST+ + K+ + +KG ++ PV + A TG L++L+ G + A L +G + G G G ++KL+ N + + +E VL E L Sbjct: 16 MASNLLQQGHQLRVFDVNAEAVRHLVDKGATPAANPAQAAKDAEFIITMLPNGDLVRNVLFGENGVCEGLSTDALVIDMSTIHPLQTDKLIADMQAKGFSMMDVPVGRTSANAITGTLLLLAGGTAEQVERATPILMAMGSELINAGGPGMGIRVKLINNYMSIALNALSAEAAVLCEALNL 197 The following BLAST results are available for this feature:
BLAST of CX288572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288572 ID=CX288572; Name=CX288572; organism=Citrus clementina; type=EST; length=564bpback to top |