CX288573

Overview
NameCX288573
Unique NameCX288573
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length490
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71BY_ARATH (Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=CYP71B37 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 8.508e-14
Identity = 44/144 (30.56%), Postives = 76/144 (52.78%), Query Frame = 2
Query:   56 LLVSILLIVYQHIRRNKIQPKNXXXXXXXXXXXGHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIR 487
            L +S LL+    +++ + Q +            G+ H L     Q+L +L  KYGP++LL+ GS PT+VVSS    ++ L  +D+   +RP L             + +P+ ++W+ LRR+   E+FSP+++ L   IR EE++
Sbjct:   10 LFLSCLLLAALRLKKRR-QHQRKPPSPPGFPIIGNLHQLGELPHQSLWSLSKKYGPVMLLKFGSIPTVVVSSSETAKQALKIHDLNCCSRPSLAGPRALSYNYLDIVFSPFNDYWKELRRMCVQELFSPKQVHLIQPIREEEVK 152          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 1.111e-13
Identity = 50/156 (32.05%), Postives = 81/156 (51.92%), Query Frame = 2
Query:   32 MDALHYLGLLV--SILLIVYQHIRR--NKIQPKNXXXXXXXXXXXGHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIR 487
            M  + +L LL    ILL  ++H +R  N+ QP +           G+ H L     Q+L +L   YGP++LL++GS PT+VVSS    ++ L  ND+   +RP L    +          +P+ ++W+ LRR+   E+FS +R+     I+ EE+R
Sbjct:    1 MATIWFLSLLFLCCILLAAFKHKKRRTNQQQPPSPPGFPII----GNLHQLGELPHQSLWSLSKTYGPVMLLKLGSVPTVVVSSSETAKQVLKINDLHCCSRPSLAGAKELSYNYLDIAFSPFDDYWKELRRICVQELFSAKRVHSIQPIKEEEVR 152          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 1.451e-13
Identity = 51/148 (34.46%), Postives = 78/148 (52.70%), Query Frame = 2
Query:   56 LLVSILLIVYQHIRRNKIQPK-NXXXXXXXXXXXGHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTS----IGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEI 484
            LL SI+LI     ++     K N            + H L     ++L +L ++YGP++LL  GS P LVVSS  A ++ L  +D +FA+RP    R +  +KIF +      APYGE+WR ++ V  L +FS + +    ++R EEI
Sbjct:   10 LLCSIILITILFFKKQSRGKKSNAPPSPPRLPLIRNLHQLGRHPHRSLCSLSHRYGPLMLLHFGSVPVLVVSSADAAKDVLKTHDRVFASRP----RSKIFDKIFYNGRDVALAPYGEYWRQMKSVCVLHLFSNKMVRSFRDVRQEEI 153          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71BQ_ARATH (Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=CYP71B26 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.895e-13
Identity = 42/152 (27.63%), Postives = 73/152 (48.03%), Query Frame = 2
Query:   32 MDALHYLGLLVSILLIVYQHIRRNKIQPKNXXXXXXXXXXXGHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIR 487
            MD++  L LL  I+ ++    +R                  G+ H L     Q+L  L  KYGP++LL++G  PTL++SS    ++ L   D+   +RP L    +          +PY E+W+ LR++ + E+FS  ++     I+ EE++
Sbjct:    1 MDSIWILSLLFFIIFLLLAAFKRKNHGKHRRIPSPPGFPIIGNLHQLGELQHQSLWKLSKKYGPVMLLKLGKVPTLILSSSETAKQALRDYDLHCCSRPSLAGGRELSYNNLDMSSSPYNEYWKELRKLCSQELFSANKIQSIQPIKDEEVK 152          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.895e-13
Identity = 47/147 (31.97%), Postives = 76/147 (51.70%), Query Frame = 2
Query:   56 LLVSILLIVYQHIRRNKIQPKNXXXXXXXXXXXGHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTS----IGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEI 484
            L++ I ++ ++  +R K    N           G+ H L     ++L +L ++YGP++LL +G  P LVVSS     + L  +D +FA+RP    R +  EK+F        APYGE+WR ++ V  L + S + +    N+R EEI
Sbjct:   12 LIIFITILFFKKQKRGK--KSNTPRSPPRLPLIGNLHQLGHHPHRSLCSLSHRYGPLMLLHLGRVPVLVVSSADVARDILKTHDRVFASRP----RSKLFEKLFYDGRDVAFAPYGEYWRQIKSVCVLRLLSNKMVTSFRNVRQEEI 152          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.233e-13
Identity = 44/142 (30.99%), Postives = 72/142 (50.70%), Query Frame = 2
Query:   71 LLIVYQHIRRNKIQPKNXXXXXXXXXXXGHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTS----IGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEI 484
            LL++ Q + R      N           G+ H L L   ++L +L ++YGP++LL  G  P LVVSS     + +  +D+  ANRP L    +  EKIF      + +PYGE+WR ++ V  + + + +++     +R EEI
Sbjct:   16 LLLLKQFLNRTYTAKVNLPPSPWRVPVIGNLHQLSLHPHRSLRSLSHRYGPLMLLHFGRVPVLVVSSSDVAHDLMKTHDLKVANRPQL----KVVEKIFNGGREMVFSPYGEYWRQIKSVCIVNLLNKKKVQSFEKVREEEI 153          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 5.515e-13
Identity = 45/151 (29.80%), Postives = 75/151 (49.67%), Query Frame = 2
Query:   56 LLVSILLIVYQHIRRNKIQPKNXXXXXXXXXXXGHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTSI--------GAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEI 484
            ++  + +I+++  +R K   +N           G+ H L     ++L +L ++YGP++LL  G  P LVVSS     + L  +D +FA+RP        + KIF  +         APYGE+WR ++ V  L +FS + +     +R EEI
Sbjct:   11 IIFVVTIIIFRKQKRGK--KRNTLPSPPGLPLIGNLHQLGRHPHRSLCSLSHRYGPLMLLHFGRVPVLVVSSAELARDVLKTHDRVFASRP--------RSKIFEKLLYDKHDVASAPYGEYWRQMKSVCVLHLFSNKMVRSFREVREEEI 151          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 9.407e-13
Identity = 37/110 (33.64%), Postives = 62/110 (56.36%), Query Frame = 2
Query:  155 GHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEI 484
            G+ H L L   + L++L  ++GP++LL+ G  P L+VSS     + +  +D+ FANRP+  S  +        + APYGE+WRN++ +  + + S + +  S   R EEI
Sbjct:   43 GNLHQLSLHPHRALSSLSARHGPLMLLRFGRVPVLIVSSADVAHDVMKTHDLKFANRPITKSAHKISNGGRDLVFAPYGEYWRNVKSLCTIHLLSNKMVQSSEKRREEEI 152          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.605e-12
Identity = 47/148 (31.76%), Postives = 76/148 (51.35%), Query Frame = 2
Query:   59 LVSILLIVYQHIRRN--KIQPKNXXXXXXXXXXXGHFHLL---KLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIR 487
            +VS++L++Y  +R    K   +            GH  LL   K P  +TL +L +KYGPI  +++G++  +VVS+    +EC T NDI  ++ P L S           + APYG +WR LR++   E  SP R+    ++R  E++
Sbjct:   14 VVSLILLLYLFLRGGSWKSGEEGPPTVAGAWPIIGHLPLLLGSKTP-HKTLGDLADKYGPIFSIKIGAKNAVVVSNWEMAKECYTTNDIAVSSLPDLISANLLCYNRSMIVVAPYGPYWRQLRKILMSEFLSPSRVEQLHHVRVSEVQ 160          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71A3_SOLME (Cytochrome P450 71A3 (Fragment) OS=Solanum melongena GN=CYP71A3 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.737e-12
Identity = 38/113 (33.63%), Postives = 63/113 (55.75%), Query Frame = 2
Query:  155 GHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQ----EKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEE 481
            G+ H L L   ++L  L  KYGP++LL +GS+P +V SS  A+ + +  ND++++NRP      +     K+  F    +P+GE+WR +R +  L + S +R+      R EE
Sbjct:   36 GNLHQLGLHPHRSLHKLSKKYGPVMLLHLGSKPVIVASSVEAVRDIMKTNDLVWSNRPKSKMADRLIYGSKDVSF----SPHGEYWRQIRSITVLHLLSNKRVQSYRAAREEE 144          
The following BLAST results are available for this feature:
BLAST of CX288573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
C71BY_ARATH8.508e-1430.56Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=C... [more]
C71B9_ARATH1.111e-1332.05Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]
C71AO_ARATH1.451e-1334.46Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C71BQ_ARATH1.895e-1327.63Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=C... [more]
C71AL_ARATH1.895e-1331.97Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
C71AE_ARATH3.233e-1330.99Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C71AQ_ARATH5.515e-1329.80Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C71AG_ARATH9.407e-1333.64Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]
C82A2_SOYBN1.605e-1231.76Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C71A3_SOLME2.737e-1233.63Cytochrome P450 71A3 (Fragment) OS=Solanum melonge... [more]

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Properties
Property NameValue
Genbank descriptionC02001H09SK IF1 Citrus clementina cDNA clone C02001H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288573 ID=CX288573; Name=CX288573; organism=Citrus clementina; type=EST; length=490bp
CGGCACGAGGGCGGAAGAAAAAGAGTCCGCCATGGATGCTCTGCACTATC
TTGGCTTGTTAGTTTCCATTCTTCTCATCGTCTATCAACATATCCGACGA
AACAAAATTCAACCCAAAAATCTACCCCCAAGCCCTCCCAGTCTTCCAAT
CATAGGTCATTTCCACCTCTTAAAATTGCCCATGTCCCAGACACTGACCA
ATCTCTGCAACAAGTATGGTCCTATATTACTGCTTCAAGTAGGCTCACGC
CCCACACTAGTAGTCTCGAGTCGATCGGCTATTGAAGAATGCTTGACAAA
AAATGATATAATCTTCGCCAATCGTCCACTCTTGCCCTCTAGAGGGCAAG
AGAAGGAGAAAATTTTCACAAGCATCGGAGCTCCCTATGGCGAGCATTGG
CGCAACCTCCGCCGAGTCTATGCCCTCGAAATTTTCTCCCCAAGGCGTCT
CCTATTATCTGCAAACATTCGGACGGAAGAAATAAGATTC
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