CX288573

Overview
NameCX288573
Unique NameCX288573
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length490
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.575e-12
Identity = 39/114 (34.21%), Postives = 63/114 (55.26%), Query Frame = 2
Query:  155 GHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTS----IGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEI 484
            G+ H L     ++L +L  +YGP++LL +G  P L+VSS    +E L  +D  FANRP    R +  +K+  +      APYGE+WR ++ V  + + S + +    ++R EEI
Sbjct:   41 GNLHQLGRHTHRSLCDLSRRYGPLMLLHLGRVPVLIVSSADMAQEILKTHDQAFANRP----RSKLSQKLLYNNRDVASAPYGEYWRQMKSVCVIHLLSNKMVRSFRDVREEEI 150          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 7.964e-12
Identity = 41/110 (37.27%), Postives = 64/110 (58.18%), Query Frame = 2
Query:  155 GHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRP-LLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEE 481
            G  HLL+      L  L +KYGP++ L++G   T+VVSS +A +E L   D++FA+RP LL S     + +     APYG +WR LR++  +E+ S + +   A +R +E
Sbjct:   71 GLLHLLRSHPQVALRELASKYGPVMFLRMGQIDTVVVSSPAAAQEVLRDKDVMFASRPSLLVSEIFCYDNLDVGF-APYGAYWRMLRKLCTVELLSTKVVRQLAPVRNDE 179          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.964e-12
Identity = 45/146 (30.82%), Postives = 72/146 (49.32%), Query Frame = 2
Query:   59 LVSILLIVYQHIRRNKIQPKNXXXXXXXXXXXGHFHLLKLPMS--QTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRP-LLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIR 487
            L+ + L +Y+   R K  P             GH  LL    +  + L  L +KYGP+  +++G +P LV+S+    +E  T ND+  ++RP L+        + F  + APYG +WR LR++   E  S RR+    +IR  E+R
Sbjct:   21 LIFLCLFLYRKNSRGKDAP----VVSGAWPILGHLSLLNGSQTPHKVLGALADKYGPLFTIKLGMKPALVLSNWEMSKELFTTNDLAVSSRPKLVAVEVMSYNQAFVGL-APYGPYWRELRKIVTFEFLSNRRIEQRNHIRVSEVR 161          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.964e-12
Identity = 46/145 (31.72%), Postives = 73/145 (50.34%), Query Frame = 2
Query:   56 LLVSILLIVYQHI--RRNKIQPKNXXXXXXXXXXXGHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTSIG-APYGEHWRNLRRVYALEIFSPRRLLLSANIRTEE 481
            LL+ + L+ Y+ +   + K+ P             G+ H L   + ++   L  +YGP++ L+ G  P +V S++ A EE L  +D+    RP L + G      F  IG A YGE WR +R++  LE+FS ++L     IR EE
Sbjct:    9 LLLPLFLVFYKRLLPSKGKLPP-----GPISLPIIGNLHQLGKSLHRSFYKLSQEYGPVMFLRFGVVPVVVFSTKEAAEEVLKTHDLETCTRPKLSATGLFTYN-FKDIGFAQYGEDWREMRKLAMLELFSSKKLKAFRYIREEE 147          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.040e-11
Identity = 47/148 (31.76%), Postives = 73/148 (49.32%), Query Frame = 2
Query:   47 YLGLLVSILLIVYQHIRRNKIQPKNXXXXXXXXXXXGHFHLLKLPMS---QTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEE 481
            ++ LL+  L+  Y+    +K+ P             G+ H L L  S   Q L  L  KYGP++ LQ+G   TLVVSS     E +  +D+ F  RP L +             APYG++WR +R++  LE+ S +R+   ++IR +E
Sbjct:   13 FVFLLLHWLVKTYKQKSSHKLPP-----GPWRLPIIGNLHQLALAASLPDQALQKLVRKYGPLMHLQLGEISTLVVSSPKMAMEMMKTHDVHFVQRPQLLAPQFMVYGATDIAFAPYGDYWRQIRKICTLELLSAKRVQSFSHIRQDE 155          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.040e-11
Identity = 39/110 (35.45%), Postives = 62/110 (56.36%), Query Frame = 2
Query:  155 GHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTSIG-APYGEHWRNLRRVYALEIFSPRRLLLSANIRTEE 481
            G+ H L   + ++   +  +YGP++LL++G  P +VVSS+   EE L  +D+    RP   + G      F  IG AP+G+ WR +R++  LE+FS ++L     IR EE
Sbjct:   39 GNLHQLGKLLYKSFHKISQEYGPVVLLRLGVVPVIVVSSKEGAEEVLKTHDLETCTRPKTAATGLFTYN-FKDIGFAPFGDDWREMRKITTLELFSVKKLKSFRYIREEE 147          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.040e-11
Identity = 38/109 (34.86%), Postives = 57/109 (52.29%), Query Frame = 2
Query:  155 GHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEE 481
            G+ H L     ++L +L  +YGP++ L  GS P LV SS  A  E +   D+ F+NRP L    +          APYGE+WR +R +  L++ S +R+     +R EE
Sbjct:   38 GNLHQLGTFPHRSLQSLSRRYGPVMQLHFGSVPVLVASSPEAAREIMKNQDLNFSNRPNLSIPRRLLYDNHDVAFAPYGEYWRQIRSICVLQLLSNKRVQSFRRVREEE 146          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.358e-11
Identity = 37/110 (33.64%), Postives = 59/110 (53.64%), Query Frame = 2
Query:  155 GHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEI 484
            G+ H L     ++L  L ++YGP++LL  GS P +V S+  A  + L  +D +FA+RP      +   K      APYGE+WR ++ V  L + S + +    ++R EEI
Sbjct:   40 GNLHQLSQHPHRSLCYLSHRYGPLMLLHFGSVPVIVASTAEAARDVLKTHDRVFASRPRSKIFEKLLYKSRNMASAPYGEYWRQMKSVSVLHLLSNKMVRSFQDVRQEEI 149          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.774e-11
Identity = 39/110 (35.45%), Postives = 59/110 (53.64%), Query Frame = 2
Query:  155 GHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEI 484
            G+ H L L   ++L +L  +YGP++LL  G  P LVVSS  A +E L  +D+ FANRP   +           +  PYGE+WR ++ V  L + + + +     IR EE+
Sbjct:   44 GNLHQLSLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDLKFANRPRSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKIREEEL 153          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.317e-11
Identity = 42/111 (37.84%), Postives = 62/111 (55.86%), Query Frame = 2
Query:  155 GHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRP-LLPSRGQEKEKIFTSIG-APYGEHWRNLRRVYALEIFSPRRLLLSANIRTEE 481
            G+ H  +    +   NL  KYGPI+ L+ G  P +V+SS+ A EE L  +D+   +RP  + +R       F  IG APYGE WR +R++  +E+FS ++L     IR EE
Sbjct:   39 GNLHQRRELHPRNSRNLSEKYGPIVFLRYGFVPVVVISSKEAAEEVLKTHDLECCSRPETVGTRAISYN--FKDIGFAPYGEDWRTMRKLSVVELFSSKKLQSFRYIREEE 147          
The following BLAST results are available for this feature:
BLAST of CX288573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
C71AP_ARATH3.575e-1234.21Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]
C99A2_ORYSJ7.964e-1237.27Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C82A3_SOYBN7.964e-1230.82Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=... [more]
C71BL_ARATH7.964e-1231.72Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
C71D8_SOYBN1.040e-1131.76Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71BZ_ARATH1.040e-1135.45Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71A6_NEPRA1.040e-1134.86Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C71AN_ARATH1.358e-1133.64Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C71AC_ARATH1.774e-1135.45Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C71BS_ARATH2.317e-1137.84Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC02001H09SK IF1 Citrus clementina cDNA clone C02001H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288573 ID=CX288573; Name=CX288573; organism=Citrus clementina; type=EST; length=490bp
CGGCACGAGGGCGGAAGAAAAAGAGTCCGCCATGGATGCTCTGCACTATC
TTGGCTTGTTAGTTTCCATTCTTCTCATCGTCTATCAACATATCCGACGA
AACAAAATTCAACCCAAAAATCTACCCCCAAGCCCTCCCAGTCTTCCAAT
CATAGGTCATTTCCACCTCTTAAAATTGCCCATGTCCCAGACACTGACCA
ATCTCTGCAACAAGTATGGTCCTATATTACTGCTTCAAGTAGGCTCACGC
CCCACACTAGTAGTCTCGAGTCGATCGGCTATTGAAGAATGCTTGACAAA
AAATGATATAATCTTCGCCAATCGTCCACTCTTGCCCTCTAGAGGGCAAG
AGAAGGAGAAAATTTTCACAAGCATCGGAGCTCCCTATGGCGAGCATTGG
CGCAACCTCCGCCGAGTCTATGCCCTCGAAATTTTCTCCCCAAGGCGTCT
CCTATTATCTGCAAACATTCGGACGGAAGAAATAAGATTC
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