CX288573

Overview
NameCX288573
Unique NameCX288573
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length490
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.317e-11
Identity = 38/110 (34.55%), Postives = 60/110 (54.55%), Query Frame = 2
Query:  155 GHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTSIG-APYGEHWRNLRRVYALEIFSPRRLLLSANIRTEE 481
            G+ H     + ++L  +  +YGP++LL  G  P ++VSS+   EE L  +D+   +RP     G      F  IG APYGE+WR +R++   E+FS ++L     IR +E
Sbjct:   39 GNLHQFGRFLHKSLHKISQEYGPVMLLHFGVVPVIIVSSKEGAEEVLKTHDLETCSRPKTVGSGLFTYN-FKDIGFAPYGENWREMRKIAVSELFSQKKLKSFRYIREDE 147          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 2.317e-11
Identity = 38/110 (34.55%), Postives = 58/110 (52.73%), Query Frame = 2
Query:  155 GHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEI 484
            G+ H L L   ++L +L  +YGP++LL  G  P LVVSS  A  E L  +D+ FANRP   +           +  PYGE+WR ++ V  L + + + +     +R EE+
Sbjct:   44 GNLHQLSLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSSEAAHEILKTHDLKFANRPKSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKVREEEV 153          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.026e-11
Identity = 43/114 (37.72%), Postives = 62/114 (54.39%), Query Frame = 2
Query:  155 GHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIF----TSIG-APYGEHWRNLRRVYALEIFSPRRLLLSANIRTEE 481
            G  HLL+      L +L  KYGP++ L+ G   T+V+SS +A +E L   D+ FA+RP L        +IF      IG APYG +WR LR++  +E+ S + +   A IR  E
Sbjct:   47 GLLHLLRSQPQVALRDLAGKYGPVMFLRTGQVDTVVISSPAAAQEVLRDKDVTFASRPSL-----LVSEIFCYGNLDIGFAPYGAYWRMLRKLCTVELLSTKMVRQLAPIRDGE 155          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.026e-11
Identity = 39/112 (34.82%), Postives = 66/112 (58.93%), Query Frame = 2
Query:  164 HLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIF---TSIG-APYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIR 487
            HL+  P  + L +L  KYGP++ LQ+G    ++VSS    +E +  +D+ FA+RP    R    + +F   T IG +PYG++WR +R++  +E+ S +R+     IR EE++
Sbjct:   34 HLVGSPPHRKLRDLAKKYGPLMHLQLGEVIFIIVSSAEYAKEVMKTHDVTFASRP----RSLFTDIVFYGSTDIGFSPYGDYWRQVRKICNVELLSMKRVQSLWPIREEEVK 141          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71BX_ARATH (Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.952e-11
Identity = 46/154 (29.87%), Postives = 75/154 (48.70%), Query Frame = 2
Query:   32 MDALHYLGLLV--SILLIVYQHIRRNKIQPKNXXXXXXXXXXXGHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIR 487
            M  + +L LL    ILL  + H +R + Q K            G+ H L     Q+L  L  KYG ++LL+ GS PT+VVSS    ++ L  +D+   +RP L               +P+ ++W+ LRR+   E+FS +R+     I+ +E++
Sbjct:    1 MATILFLSLLFLSCILLAAFTHKKRQQHQRK--PPSPPGFPIIGNLHQLGELPHQSLWRLSKKYGHVMLLKFGSIPTVVVSSSETAKQVLKIHDLHCCSRPSLAGPRALSYNYLDIAFSPFDDYWKELRRICVQELFSVKRVQSFQPIKEDEVK 152          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.952e-11
Identity = 46/143 (32.17%), Postives = 71/143 (49.65%), Query Frame = 2
Query:   56 LLVSILLIVYQHIRRNKIQPKNXXXXXXXXXXXGHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTSIG-APYGEHWRNLRRVYALEIFSPRRLLLSANIRTEE 481
            LL+ +LL+     R+++                G+ H L     + L NL   +GP++ LQ+G  P +V+SS  A EE L  +D+   +RP   +  +     F  IG APYGE WR LR++  +E+FS ++      IR EE
Sbjct:    9 LLLLLLLVTIIFTRKSQSSKLKLPPGPPKLPIIGNLHYLNGLPHKCLLNLWKIHGPVMQLQLGYVPLVVISSNQAAEEVLKTHDLDCCSRPETIA-SKTISYNFKDIGFAPYGEEWRALRKLAVIELFSLKKFNSFRYIREEE 150          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.952e-11
Identity = 48/152 (31.58%), Postives = 75/152 (49.34%), Query Frame = 2
Query:   47 YLGLLVSILLIVYQHIR--RNKIQPKNXXXXXXXXXXXGHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFT----SIG-APYGEHWRNLRRVYALEIFSPRRLLLSANIRTEE 481
            Y  LL+ + LI ++ +   + K+ P             G+ H L   + ++   L   YGP++ L  G  P +VVS+R A EE L  +D+    RP L +      K+F+     IG A YG+ WR +R++  LE+FS ++L     IR EE
Sbjct:    6 YFLLLLPLFLIFFKKLSPSKGKLPP-----GPLGLPIIGNLHQLGKSLHRSFHKLSQNYGPVMFLHFGVVPVVVVSTREAAEEVLKTHDLETCTRPKLTA-----TKLFSYNYKDIGFAQYGDDWREMRKLAMLELFSSKKLKAFRYIREEE 147          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 3.952e-11
Identity = 41/150 (27.33%), Postives = 73/150 (48.67%), Query Frame = 2
Query:   50 LGLLVSILLIVYQHIRRNKIQPKNXXXXXXXXXXXGHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTS----IGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIR 487
            L L   + L++   ++R   +  N           G+ H L L   ++L +L  +YGP++LL  G  P L+VSS     + +  +D++ ANRP    + +  +KI +       APYGE+WR ++ +    + + + +     IR EEI+
Sbjct:    8 LCLTTLLALLLKSILKRTATKNFNLPPSPWRLPVIGNLHQLSLHTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDVMKTHDLVCANRP----KTKVVDKILSGGRDVAFAPYGEYWRQMKSICIQNLLNNKMVRSYEKIREEEIK 153          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.162e-11
Identity = 43/145 (29.66%), Postives = 68/145 (46.90%), Query Frame = 2
Query:   50 LGLLVSILLIVYQHIRRNKIQPKNXXXXXXXXXXXGHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEI 484
            L L   I L++ +   +      N           G+ H L L   ++L +L  +YGP++LL  G  P LVVSS  A +E L  +D  FANRP   +           + APYGE+WR ++ V  L + + + +     +R +E+
Sbjct:    9 LCLTTLITLLLLRRFLKRTATKVNLPPSPWRLPVIGNLHQLSLHPHRSLRSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDHKFANRPRSKAVHGLMNGGRDVVFAPYGEYWRQMKSVCILNLLTNKMVESFEKVREDEV 153          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 6.742e-11
Identity = 42/147 (28.57%), Postives = 67/147 (45.58%), Query Frame = 2
Query:   71 LLIVYQHIRRNKIQPKNXXXXXXXXXXXGHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTSI--------GAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIR 487
            LL++   ++R      N           G+ H L L   ++L +L  +YGP++LL  G  P L+VSS     + L   D+I ANRP        K K+   I         APYGE+W+ ++ +    + S + +     IR +EI+
Sbjct:   16 LLLLKSILKRTTTNNLNLPPSPWRLPVIGNLHQLSLNTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDILKTYDVICANRP--------KTKVIDKILRGGRDVAFAPYGEYWKQMKSICIQNLLSNKMVRSYKKIREDEIK 154          
The following BLAST results are available for this feature:
BLAST of CX288573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
C71B5_ARATH2.317e-1134.55Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
C71AI_ARATH2.317e-1134.55Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C99A3_ORYSJ3.026e-1137.72Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C71DB_LOTJA3.026e-1134.82Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71BX_ARATH3.952e-1129.87Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=C... [more]
C71BN_ARATH3.952e-1132.17Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C71BM_ARATH3.952e-1131.58Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C71AK_ARATH3.952e-1127.33Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C71AD_ARATH5.162e-1129.66Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C71AJ_ARATH6.742e-1128.57Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC02001H09SK IF1 Citrus clementina cDNA clone C02001H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288573 ID=CX288573; Name=CX288573; organism=Citrus clementina; type=EST; length=490bp
CGGCACGAGGGCGGAAGAAAAAGAGTCCGCCATGGATGCTCTGCACTATC
TTGGCTTGTTAGTTTCCATTCTTCTCATCGTCTATCAACATATCCGACGA
AACAAAATTCAACCCAAAAATCTACCCCCAAGCCCTCCCAGTCTTCCAAT
CATAGGTCATTTCCACCTCTTAAAATTGCCCATGTCCCAGACACTGACCA
ATCTCTGCAACAAGTATGGTCCTATATTACTGCTTCAAGTAGGCTCACGC
CCCACACTAGTAGTCTCGAGTCGATCGGCTATTGAAGAATGCTTGACAAA
AAATGATATAATCTTCGCCAATCGTCCACTCTTGCCCTCTAGAGGGCAAG
AGAAGGAGAAAATTTTCACAAGCATCGGAGCTCCCTATGGCGAGCATTGG
CGCAACCTCCGCCGAGTCTATGCCCTCGAAATTTTCTCCCCAAGGCGTCT
CCTATTATCTGCAAACATTCGGACGGAAGAAATAAGATTC
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