CX288582
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288582 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.230e-33 Identity = 64/103 (62.14%), Postives = 79/103 (76.70%), Query Frame = 3 Query: 243 KIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPC 545 KIISR MF+ +L++RN+ CPA+ FYTYDAF+ AAK+FP+FG +G+ +RKRE+AAF QT HETTGGWP AP G YAWGYCF +E SS+YC P YPC Sbjct: 4 KIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERN-PSSNYCAPSPRYPC 105
BLAST of CX288582 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 3.561e-31 Identity = 62/107 (57.94%), Postives = 77/107 (71.96%), Query Frame = 3 Query: 231 GELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPC 545 G + I+SR F+ +L +RND C A+ FYTYDAF+ AA AFP FG +G+ +KRE+AAF AQT HETTGGW AP G +AWGYCF +E G ASSDYC P+ +PC Sbjct: 23 GSVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERG-ASSDYCTPSAQWPC 128
BLAST of CX288582 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 1.767e-30 Identity = 68/171 (39.77%), Postives = 87/171 (50.88%), Query Frame = 3 Query: 57 GGSAGNCGSGVVCPGGECCSRFGWCGLTIDHCCDGCQSNCNQVVCGECDPDXXTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDP----NYPCRGKY 557 G AGN CP CCS G+CGLT+ +CC GC S C + MFE +L RN+ CP + FYTYDA+ A + +P FG +G++ RKRE+AAFFAQT ET+G + WGYC E+ +SDYCDP +YPC Y Sbjct: 27 GSQAGNA----TCPNDLCCSSGGYCGLTVAYCCAGCVSQCRNC--------------------FFTESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELN-PNSDYCDPKTKSSYPCVADY 172
BLAST of CX288582 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.308e-30 Identity = 61/107 (57.01%), Postives = 76/107 (71.03%), Query Frame = 3 Query: 231 GELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPC 545 G + IIS F+ +L +RND C A+ FYTYDAF+ AA AFP FG +G+ RKR++AAF AQT HETTGGW AP G +AWGYCF +E GAA +DYC P+ +PC Sbjct: 23 GSVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAA-ADYCTPSAQWPC 128
BLAST of CX288582 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 9.696e-29 Identity = 57/105 (54.29%), Postives = 73/105 (69.52%), Query Frame = 3 Query: 237 LGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPC 545 + +IS+ +FE +L +RND+ C A+ FYTY+AFI A K F AFG +G+ R +EIAAF AQT HETTGGW AP G Y+WGYC+NRE G + DYC +PC Sbjct: 5 ISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFAAFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQG-SPGDYCASSQQWPC 108
BLAST of CX288582 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.641e-26 Identity = 58/111 (52.25%), Postives = 72/111 (64.86%), Query Frame = 3 Query: 219 AGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRG 551 +G +G II+R MFE +L +R D+ C FYTYDAFI+AA FP FG +GN+ R+RE+AAFF QT HETTGGW AP G +AWGYC E+ + DP Y RG Sbjct: 21 SGQQAGVGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEITPS-----DPPYYGRG 125
BLAST of CX288582 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.109e-24 Identity = 53/97 (54.64%), Postives = 70/97 (72.16%), Query Frame = 3 Query: 234 ELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDY 524 ++G I++ ++F ++L+ RND RCPA+ FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HETTGG A G +A GYCF RE S + Sbjct: 18 DVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSA-DGPFAGGYCFVREGNQMGSGF 113
BLAST of CX288582 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 4.216e-24 Identity = 50/105 (47.62%), Postives = 65/105 (61.90%), Query Frame = 3 Query: 237 LGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASS--DYCDPNYPC 545 + I+S +++ L +++D CPAR FYTY +F+ AA FP F +G RKRE+AAF AQ HETTGGW AP G YAWG C+ E+ SS D D +PC Sbjct: 49 VSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQWPC 153
BLAST of CX288582 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 7.191e-24 Identity = 53/96 (55.21%), Postives = 68/96 (70.83%), Query Frame = 3 Query: 237 LGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDY 524 +G I++ ++F+ +L+ RND RC A FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HETTGG +P G YA GYCF RE + Y Sbjct: 26 VGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGG-TLSPDGPYAGGYCFLREGNQMGNGY 120
BLAST of CX288582 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 7.191e-24 Identity = 50/95 (52.63%), Postives = 66/95 (69.47%), Query Frame = 3 Query: 240 GKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDY 524 G I++RE+FE +L +RN+ CPA+ FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HET GG G + GYCF R++ + Y Sbjct: 28 GSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQIDQSDRYY 118 The following BLAST results are available for this feature:
BLAST of CX288582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288582 ID=CX288582; Name=CX288582; organism=Citrus clementina; type=EST; length=557bpback to top |