CX288586 | Citrus Genome Database

Overview


Name	CX288586
Unique Name	CX288586
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	527

Libraries


Library Name	Type
IF1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_MYCSS (Enolase OS=Mycobacterium sp. (strain MCS) GN=eno PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.149e-25
Identity = 54/127 (42.52%), Postives = 83/127 (65.35%), Query Frame = 3

Query:    3 LELLNTAIAKAGYT--GKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            L+L+++AI  AG+     V + +DVAA+EFY     Y  +F++E     Q      + + Y S +  YP+VSIEDP  +DDW+ +  LT+++G++VQ+VGDDL VTNP+R+E+ I+    NALL+KV
Sbjct:  218 LDLISSAIEAAGFKLGTDVTLALDVAATEFYTEGTGY--SFEKETRTAEQ------MAEFYASLLDAYPLVSIEDPLSEDDWDGWVSLTTQIGDRVQLVGDDLFVTNPERLEEGIERGAANALLVKV 336

HSP 2 Score: 29.6462 bits (65), Expect = 1.149e-25
Identity = 11/23 (47.83%), Postives = 20/23 (86.96%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+++AV ++  +G+
Sbjct:  335 KVNQIGTLTETLDAVALAHNSGY 357

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_MYCSK (Enolase OS=Mycobacterium sp. (strain KMS) GN=eno PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.149e-25
Identity = 54/127 (42.52%), Postives = 83/127 (65.35%), Query Frame = 3

Query:    3 LELLNTAIAKAGYT--GKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            L+L+++AI  AG+     V + +DVAA+EFY     Y  +F++E     Q      + + Y S +  YP+VSIEDP  +DDW+ +  LT+++G++VQ+VGDDL VTNP+R+E+ I+    NALL+KV
Sbjct:  218 LDLISSAIEAAGFKLGTDVTLALDVAATEFYTEGTGY--SFEKETRTAEQ------MAEFYASLLDAYPLVSIEDPLSEDDWDGWVSLTTQIGDRVQLVGDDLFVTNPERLEEGIERGAANALLVKV 336

HSP 2 Score: 29.6462 bits (65), Expect = 1.149e-25
Identity = 11/23 (47.83%), Postives = 20/23 (86.96%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+++AV ++  +G+
Sbjct:  335 KVNQIGTLTETLDAVALAHNSGY 357

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_MYCSJ (Enolase OS=Mycobacterium sp. (strain JLS) GN=eno PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.149e-25
Identity = 54/127 (42.52%), Postives = 83/127 (65.35%), Query Frame = 3

Query:    3 LELLNTAIAKAGYT--GKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            L+L+++AI  AG+     V + +DVAA+EFY     Y  +F++E     Q      + + Y S +  YP+VSIEDP  +DDW+ +  LT+++G++VQ+VGDDL VTNP+R+E+ I+    NALL+KV
Sbjct:  218 LDLISSAIEAAGFKLGTDVTLALDVAATEFYTEGTGY--SFEKETRTAEQ------MAEFYASLLDAYPLVSIEDPLSEDDWDGWVSLTTQIGDRVQLVGDDLFVTNPERLEEGIERGAANALLVKV 336

HSP 2 Score: 29.6462 bits (65), Expect = 1.149e-25
Identity = 11/23 (47.83%), Postives = 20/23 (86.96%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+++AV ++  +G+
Sbjct:  335 KVNQIGTLTETLDAVALAHNSGY 357

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_CORDI (Enolase OS=Corynebacterium diphtheriae GN=eno PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.150e-25
Identity = 58/127 (45.67%), Postives = 80/127 (62.99%), Query Frame = 3

Query:    3 LELLNTAIAKAGYT--GKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            L+L+  AI KAG+     + + +DVA+SEFY  D  Y     E   +   K+        Y+  I++YPIVSIEDP  +DDWE Y  LT+ +G+KVQIVGDD  VTNP R+++ I++K  NALL+KV
Sbjct:  218 LDLIVEAIEKAGFKPGADIALALDVASSEFY-KDGKYHFEGGEHTAEEMAKV--------YEQLIAEYPIVSIEDPLQEDDWEGYTALTAAIGDKVQIVGDDFFVTNPARLKEGIEKKAANALLVKV 335

HSP 2 Score: 27.7202 bits (60), Expect = 1.150e-25
Identity = 11/23 (47.83%), Postives = 19/23 (82.61%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+ +AV ++ + G+
Sbjct:  334 KVNQIGTLTETFDAVDLAHRNGY 356

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_CLAMS (Enolase OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=eno PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.150e-25
Identity = 56/127 (44.09%), Postives = 77/127 (60.63%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            L+LL  AI  AG+T   ++ +G+DVA+SEFY SD  Y            QK+    L   +   ++ YP+++IEDP D+DDW  Y   T+E+G KVQIVGDDL VTNPKR+   I     N++L+KV
Sbjct:  219 LDLLMEAIDAAGFTAGKQIALGLDVASSEFY-SDGAYTFE--------GQKVDAAHLTAYFADLVASYPLITIEDPLDEDDWAGYDHFTAELGSKVQIVGDDLFVTNPKRLADGITRGVANSILVKV 336

HSP 2 Score: 30.8018 bits (68), Expect = 1.150e-25
Identity = 11/23 (47.83%), Postives = 22/23 (95.65%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+++AV +++++G+
Sbjct:  335 KVNQIGTLTETLDAVSLAQRSGY 357

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO1_METCA (Enolase 1 OS=Methylococcus capsulatus GN=eno1 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.150e-25
Identity = 54/126 (42.86%), Postives = 84/126 (66.67%), Query Frame = 3

Query:    6 ELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            +L+  AI KAGY     + I +D AAS F+  +  Y L    + +  S +++     DLY+ +I  YPIVSIED   ++DW+ + + T+ +GEK+QIVGDDLLVTN + +++AI+EK+CNA+L+K+
Sbjct:  221 DLIVEAITKAGYEPGEDIAIALDPAASSFH-ENGVYRLTRSGQGDKTSSEMT-----DLYRRWIDKYPIVSIEDGLAENDWDGFREHTAVLGEKIQIVGDDLLVTNTRFIQRAIEEKSCNAVLIKL 340

HSP 2 Score: 36.5798 bits (83), Expect = 1.150e-25
Identity = 13/23 (56.52%), Postives = 21/23 (91.30%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            K+NQIG+VTE++EA+ + ++AGW
Sbjct:  339 KLNQIGTVTETVEAIHLCRKAGW 361

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_BACCZ (Enolase OS=Bacillus cereus (strain ZK / E33L) GN=eno PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.496e-25
Identity = 53/128 (41.41%), Postives = 81/128 (63.28%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDK-TYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            LE++  AI KAGY     V +GMDVA+SEFY  +   YDL       +G   ++   + D Y+    D+PI+SIED  D++DW+ +  LT  +G+KVQ+VGDDL VTN +++ + I++   N++L+KV
Sbjct:  219 LEVIIEAIEKAGYKAGENVFLGMDVASSEFYNKETGKYDLA-----GEGRTGLTSAEMVDFYEELCKDFPIISIEDGLDENDWDGHKLLTERLGDKVQLVGDDLFVTNTQKLAEGIEKGISNSILIKV 341

HSP 2 Score: 35.039 bits (79), Expect = 1.496e-25
Identity = 14/23 (60.87%), Postives = 21/23 (91.30%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+ EA+ M+K+AG+
Sbjct:  340 KVNQIGTLTETFEAIEMAKRAGY 362

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_BACCN (Enolase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=eno PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.496e-25
Identity = 55/128 (42.97%), Postives = 82/128 (64.06%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDK-TYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            LE++  AI KAGY     V +GMDVA+SEFY  +   YDL+      +G    S + + D Y+    D+PI+SIED  D++DW+ +  LT  +G+KVQ+VGDDL VTN K++ + I++   N++L+KV
Sbjct:  219 LEVIIEAIEKAGYKAGEDVFLGMDVASSEFYNKETGKYDLS-----GEGRSMTSAEMV-DFYEELCKDFPIISIEDGLDENDWDGHKLLTERLGKKVQLVGDDLFVTNTKKLAEGIEKGISNSILIKV 340

HSP 2 Score: 35.039 bits (79), Expect = 1.496e-25
Identity = 14/23 (60.87%), Postives = 21/23 (91.30%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+ EA+ M+K+AG+
Sbjct:  339 KVNQIGTLTETFEAIEMAKRAGY 361

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_CLAM3 (Enolase OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=eno PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.496e-25
Identity = 56/127 (44.09%), Postives = 77/127 (60.63%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            L+LL  AI  AG+T   ++ +G+DVA+SEFY SD  Y            QK+    L   +   ++ YP+++IEDP D+DDW  Y   T+E+G KVQIVGDDL VTNPKR+   I     N++L+KV
Sbjct:  219 LDLLMEAIDAAGFTAGKQIALGLDVASSEFY-SDGAYTFE--------GQKVDAAHLTAYFADLVASYPLITIEDPLDEDDWAGYDHFTAELGAKVQIVGDDLFVTNPKRLADGITRGVANSILVKV 336

HSP 2 Score: 30.8018 bits (68), Expect = 1.496e-25
Identity = 11/23 (47.83%), Postives = 22/23 (95.65%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+++AV +++++G+
Sbjct:  335 KVNQIGTLTETLDAVSLAQRSGY 357

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_ENTHR (Enolase OS=Enterococcus hirae GN=eno PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.947e-25
Identity = 54/126 (42.86%), Postives = 84/126 (66.67%), Query Frame = 3

Query:    6 ELLNTAIAKAGYT-GK-VVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            E++  AI KAGY  GK VV+ MD A+SEFY  DK   +    ++ +G +  + D +   Y+  +S YPI+SIED  D++DW+ + KLT  +G+KVQ+VGDDL VTN +++ + I++   N++L+KV
Sbjct:  220 EVIIEAIEKAGYVPGKDVVLAMDAASSEFY--DKEKGVYVLADSGEGEK--TTDEMIKFYEELVSKYPIISIEDGLDENDWDGFKKLTDVLGDKVQLVGDDLFVTNTQKLSEGIEKGIANSILIKV 341

HSP 2 Score: 35.4242 bits (80), Expect = 1.947e-25
Identity = 14/23 (60.87%), Postives = 21/23 (91.30%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+ EA+ M+K+AG+
Sbjct:  340 KVNQIGTLTETFEAIEMAKEAGY 362

The following BLAST results are available for this feature:

BLAST of CX288586 vs. ExPASy Swiss-Prot

BLAST of CX288586 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
ENO_MYCSS	1.149e-25	42.52	Enolase OS=Mycobacterium sp. (strain MCS) GN=eno P...	[more]
ENO_MYCSK	1.149e-25	42.52	Enolase OS=Mycobacterium sp. (strain KMS) GN=eno P...	[more]
ENO_MYCSJ	1.149e-25	42.52	Enolase OS=Mycobacterium sp. (strain JLS) GN=eno P...	[more]
ENO_CORDI	1.150e-25	45.67	Enolase OS=Corynebacterium diphtheriae GN=eno PE=3...	[more]
ENO_CLAMS	1.150e-25	44.09	Enolase OS=Clavibacter michiganensis subsp. sepedo...	[more]
ENO1_METCA	1.150e-25	42.86	Enolase 1 OS=Methylococcus capsulatus GN=eno1 PE=3...	[more]
ENO_BACCZ	1.496e-25	41.41	Enolase OS=Bacillus cereus (strain ZK / E33L) GN=e...	[more]
ENO_BACCN	1.496e-25	42.97	Enolase OS=Bacillus cereus subsp. cytotoxis (strai...	[more]
ENO_CLAM3	1.496e-25	44.09	Enolase OS=Clavibacter michiganensis subsp. michig...	[more]
ENO_ENTHR	1.947e-25	42.86	Enolase OS=Enterococcus hirae GN=eno PE=1 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	C02002A12SK IF1 Citrus clementina cDNA clone C02002A12, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX288586 ID=CX288586; Name=CX288586; organism=Citrus clementina; type=EST; length=527bp
GACTTGAATTGCTCAACACAGCCATTGCTAAAGCCGGTTACACAGGCAAA
GTTGTCATTGGAATGGATGTTGCTGCATCTGAATTCTATGGCTCAGATAA
GACTTATGATCTGAACTTCAAGGAAGAGAACAATGATGGTTCACAAAAGA
TCTCAGGAGATGCACTCAAAGATCTCTATAAGTCATTCATCTCTGATTAT
CCTATTGTATCAATTGAAGATCCATTTGACCAAGACGACTGGGAGCACTA
TGCCAAGCTAACCAGTGAGGTCGGAGAAAAAGTACAAATTGTTGGAGATG
ATCTTTTGGTCACCAATCCTAAGAGGGTTGAGAAGGCTATCAAAGAGAAG
ACCTGCAACGCCCTCCTTCTCAAGGTACTTCTTTAGTCCTTCTTTATTTG
GTCATTGGTTTACGACATTGTAAATGAAAATCTGTTCCTTCTCTCTGTTC
TGGTGGAAAGGTTAATCAAATTGGATCTGTAACTGAGAGCATTGAAGCCG
TCAGAATGTCCAAGCAAGCTGGGTGGG