CX288586 | Citrus Genome Database

Overview


Name	CX288586
Unique Name	CX288586
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	527

Libraries


Library Name	Type
IF1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_THENN (Enolase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=eno PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 7.782e-24
Identity = 57/128 (44.53%), Postives = 82/128 (64.06%), Query Frame = 3

Query:    3 LELLNTAIAKAGY--TGKVVIGMDVAASEFYGSDK-TYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            +++L  AI +AGY  + +V I +D AAS FY  +K  Y +       DG +K S + L   Y+  I+ YPI+SIEDPF ++DW+ + + T  VG KVQIVGDDL VTN KR+ K I+ K  N++L+K+
Sbjct:  223 IKILIEAIEEAGYKPSEQVFIALDCAASSFYDEEKGVYFV-------DGEEK-SSEVLMGYYEELIAKYPIISIEDPFAEEDWDAFVEFTKRVGNKVQIVGDDLYVTNVKRLSKGIELKATNSILIKL 342

HSP 2 Score: 27.7202 bits (60), Expect = 7.782e-24
Identity = 10/20 (50.00%), Postives = 19/20 (95.00%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQ 517
            K+NQIG+VTE+++AV ++++
Sbjct:  341 KLNQIGTVTETLDAVELAQK 360

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_KINRD (Enolase OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=eno PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.782e-24
Identity = 52/127 (40.94%), Postives = 84/127 (66.14%), Query Frame = 3

Query:    3 LELLNTAIAKAGYT--GKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            L+L+  AI K G+     + + +DVAA+EF+G+D  YD        +GS++ S + +   Y+  +S+YP+VSIEDP  +DDW+ +  +T+ +G K+Q+VGDDL VTNP+R++K I     N++L+KV
Sbjct:  219 LDLIVEAIGKTGFAVGSDIALALDVAATEFHGADG-YDF-------EGSKR-SAEWMTGYYEGLVSEYPLVSIEDPLSEDDWDGWQHITNALGGKLQLVGDDLFVTNPERLQKGIDLSAGNSMLVKV 336

HSP 2 Score: 29.261 bits (64), Expect = 7.782e-24
Identity = 12/23 (52.17%), Postives = 20/23 (86.96%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIGS+TE+++AV ++ + G+
Sbjct:  335 KVNQIGSLTETLDAVDLAHRNGF 357

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_XANOR (Enolase OS=Xanthomonas oryzae pv. oryzae GN=eno PE=3 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 7.782e-24
Identity = 54/127 (42.52%), Postives = 79/127 (62.20%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            L+ +  AI KAGYT    +++G+DVA+SEFY + K    N   EN    ++++ +   D    +++ YPI+SIED   +DDW  +  LT  VG+ VQ+VGDDL VTNPK  ++ I   T NA+L+KV
Sbjct:  221 LDTILEAIGKAGYTAGEDILLGLDVASSEFYDNGK---YNLVGEN----KRLTSEQFVDFLADWVAQYPIISIEDGLAEDDWAGWKLLTDRVGKHVQLVGDDLFVTNPKIFKQGIDSGTANAILIKV 340

HSP 2 Score: 30.0314 bits (66), Expect = 7.782e-24
Identity = 12/23 (52.17%), Postives = 19/23 (82.61%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE++EA+ M+  A +
Sbjct:  339 KVNQIGTLTETLEAIAMAHAANY 361

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_XANOP (Enolase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=eno PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 7.782e-24
Identity = 54/127 (42.52%), Postives = 79/127 (62.20%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            L+ +  AI KAGYT    +++G+DVA+SEFY + K    N   EN    ++++ +   D    +++ YPI+SIED   +DDW  +  LT  VG+ VQ+VGDDL VTNPK  ++ I   T NA+L+KV
Sbjct:  221 LDTILEAIGKAGYTAGEDILLGLDVASSEFYDNGK---YNLVGEN----KRLTSEQFVDFLADWVAQYPIISIEDGLAEDDWAGWKLLTDRVGKHVQLVGDDLFVTNPKIFKQGIDSGTANAILIKV 340

HSP 2 Score: 30.0314 bits (66), Expect = 7.782e-24
Identity = 12/23 (52.17%), Postives = 19/23 (82.61%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE++EA+ M+  A +
Sbjct:  339 KVNQIGTLTETLEAIAMAHAANY 361

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_XANOM (Enolase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=eno PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 7.782e-24
Identity = 54/127 (42.52%), Postives = 79/127 (62.20%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            L+ +  AI KAGYT    +++G+DVA+SEFY + K    N   EN    ++++ +   D    +++ YPI+SIED   +DDW  +  LT  VG+ VQ+VGDDL VTNPK  ++ I   T NA+L+KV
Sbjct:  221 LDTILEAIGKAGYTAGEDILLGLDVASSEFYDNGK---YNLVGEN----KRLTSEQFVDFLADWVAQYPIISIEDGLAEDDWAGWKLLTDRVGKHVQLVGDDLFVTNPKIFKQGIDSGTANAILIKV 340

HSP 2 Score: 30.0314 bits (66), Expect = 7.782e-24
Identity = 12/23 (52.17%), Postives = 19/23 (82.61%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE++EA+ M+  A +
Sbjct:  339 KVNQIGTLTETLEAIAMAHAANY 361

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_BACSU (Enolase OS=Bacillus subtilis GN=eno PE=1 SV=4)

HSP 1 Score: 95.9005 bits (237), Expect = 7.782e-24
Identity = 55/128 (42.97%), Postives = 80/128 (62.50%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGS-DKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            L+ +  AI KAG+    +V + MD A+SEFY   D  Y L+      +G  K S + + D Y+  +S YPI+SIED  D++DWE +  LT  +G+KVQ+VGDDL VTN K++ + IK    N++L+KV
Sbjct:  219 LQTIVEAIEKAGFKPGEEVKLAMDAASSEFYNKEDGKYHLS-----GEGVVKTSAEMV-DWYEELVSKYPIISIEDGLDENDWEGHKLLTERLGKKVQLVGDDLFVTNTKKLSEGIKNGVGNSILIKV 340

HSP 2 Score: 33.8834 bits (76), Expect = 7.782e-24
Identity = 13/23 (56.52%), Postives = 21/23 (91.30%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+ +A+ M+K+AG+
Sbjct:  339 KVNQIGTLTETFDAIEMAKRAGY 361

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_MYCS2 (Enolase OS=Mycobacterium smegmatis GN=eno PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 7.783e-24
Identity = 51/127 (40.16%), Postives = 77/127 (60.63%), Query Frame = 3

Query:    3 LELLNTAIAKAGYT--GKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            L+L+++AI   G      V + +DVAA+EFY     Y   F++E     Q      + + Y   +  YP+VSIEDP  +DDW+ +  LT+ +G+++Q+VGDDL VTNP+R+E  I+    NALL+KV
Sbjct:  218 LDLISSAIEATGLKLGSDVALALDVAATEFYTEGSGYA--FEKETRTAEQ------MAEFYAGLLDSYPLVSIEDPLSEDDWDGWVSLTAAIGDRIQLVGDDLFVTNPERLEDGIQRGAANALLVKV 336

HSP 2 Score: 29.6462 bits (65), Expect = 7.783e-24
Identity = 11/23 (47.83%), Postives = 20/23 (86.96%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+++AV ++  +G+
Sbjct:  335 KVNQIGTLTETLDAVSLAHNSGY 357

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_LEIXX (Enolase OS=Leifsonia xyli subsp. xyli GN=eno PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 7.784e-24
Identity = 51/127 (40.16%), Postives = 82/127 (64.57%), Query Frame = 3

Query:    3 LELLNTAIAKAGYT--GKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            L+L+  AI KAG+T   ++ +G+DVA++EF+ +       ++ E  D +       +   Y    ++YP+VSIEDP  +DDWE +A L +E+G  +Q+VGDDL VTNPKR+ + I++K  N++L+KV
Sbjct:  219 LDLIAEAIEKAGFTVGSQIALGLDVASTEFFENGV-----YRFEGQDRTAA----EMSAYYTDLANNYPLVSIEDPLAEDDWEGWAHLNAEIGSTLQLVGDDLFVTNPKRLAQGIQQKAANSILVKV 336

HSP 2 Score: 30.0314 bits (66), Expect = 7.784e-24
Identity = 11/22 (50.00%), Postives = 21/22 (95.45%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAG 523
            KVNQIG++TE+++AV +++++G
Sbjct:  335 KVNQIGTLTETLDAVSLAQRSG 356

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_LACBA (Enolase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=eno PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.012e-23
Identity = 55/127 (43.31%), Postives = 77/127 (60.63%), Query Frame = 3

Query:    6 ELLNTAIAKAGYT-GK-VVIGMDVAASEFYGSD-KTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            E+L  AI  AGY  GK V I  D A+SEFY +D K Y+L       DG +  + +    L +S +  YP+VSIEDP D+++WE +   T  +G+KVQ+VGDDL VTN   + K IK    N++L+K+
Sbjct:  220 EILVEAIKNAGYVPGKDVAIAFDCASSEFYNADTKKYELV-----GDGKE-YTAEEFVSLLESIVDKYPVVSIEDPLDENEWEDWQMATERLGKKVQLVGDDLFVTNTDYLAKGIKMGVGNSILIKL 340

HSP 2 Score: 36.965 bits (84), Expect = 1.012e-23
Identity = 15/23 (65.22%), Postives = 22/23 (95.65%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            K+NQIG++TE++EAV M+KQAG+
Sbjct:  339 KLNQIGTLTETVEAVEMAKQAGY 361

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_BIFAA (Enolase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=eno PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.013e-23
Identity = 54/127 (42.52%), Postives = 85/127 (66.93%), Query Frame = 3

Query:    3 LELLNTAIAKAGYT-GKVV-IGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            L  +  AI+ AGY  GK + I +DVA+SEFY  + T   +F+ ++ +    +      D Y++ I++YPIVSIEDPF ++ W+ +A +T+++G+++Q VGDDLLVTNP R+ K IK    N+LL+K+
Sbjct:  219 LNYIMDAISAAGYEPGKQIGISLDVASSEFYNKE-TGKYHFEGDDREAGYML------DFYENLINEYPIVSIEDPFQEEGWDDWAAITAKLGDRLQFVGDDLLVTNPARLAKGIKLGAANSLLVKL 338

HSP 2 Score: 28.4906 bits (62), Expect = 1.013e-23
Identity = 10/23 (43.48%), Postives = 20/23 (86.96%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            K+NQIG+VTE+++A+ ++ + G+
Sbjct:  337 KLNQIGTVTETLDAIELATKNGF 359

The following BLAST results are available for this feature:

BLAST of CX288586 vs. ExPASy Swiss-Prot

BLAST of CX288586 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
ENO_THENN	7.782e-24	44.53	Enolase OS=Thermotoga neapolitana (strain ATCC 490...	[more]
ENO_KINRD	7.782e-24	40.94	Enolase OS=Kineococcus radiotolerans (strain ATCC ...	[more]
ENO_XANOR	7.782e-24	42.52	Enolase OS=Xanthomonas oryzae pv. oryzae GN=eno PE...	[more]
ENO_XANOP	7.782e-24	42.52	Enolase OS=Xanthomonas oryzae pv. oryzae (strain P...	[more]
ENO_XANOM	7.782e-24	42.52	Enolase OS=Xanthomonas oryzae pv. oryzae (strain M...	[more]
ENO_BACSU	7.782e-24	42.97	Enolase OS=Bacillus subtilis GN=eno PE=1 SV=4	[more]
ENO_MYCS2	7.783e-24	40.16	Enolase OS=Mycobacterium smegmatis GN=eno PE=1 SV=...	[more]
ENO_LEIXX	7.784e-24	40.16	Enolase OS=Leifsonia xyli subsp. xyli GN=eno PE=3 ...	[more]
ENO_LACBA	1.012e-23	43.31	Enolase OS=Lactobacillus brevis (strain ATCC 367 /...	[more]
ENO_BIFAA	1.013e-23	42.52	Enolase OS=Bifidobacterium adolescentis (strain AT...	[more]

Pages

Properties


Property Name	Value
Genbank description	C02002A12SK IF1 Citrus clementina cDNA clone C02002A12, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX288586 ID=CX288586; Name=CX288586; organism=Citrus clementina; type=EST; length=527bp
GACTTGAATTGCTCAACACAGCCATTGCTAAAGCCGGTTACACAGGCAAA
GTTGTCATTGGAATGGATGTTGCTGCATCTGAATTCTATGGCTCAGATAA
GACTTATGATCTGAACTTCAAGGAAGAGAACAATGATGGTTCACAAAAGA
TCTCAGGAGATGCACTCAAAGATCTCTATAAGTCATTCATCTCTGATTAT
CCTATTGTATCAATTGAAGATCCATTTGACCAAGACGACTGGGAGCACTA
TGCCAAGCTAACCAGTGAGGTCGGAGAAAAAGTACAAATTGTTGGAGATG
ATCTTTTGGTCACCAATCCTAAGAGGGTTGAGAAGGCTATCAAAGAGAAG
ACCTGCAACGCCCTCCTTCTCAAGGTACTTCTTTAGTCCTTCTTTATTTG
GTCATTGGTTTACGACATTGTAAATGAAAATCTGTTCCTTCTCTCTGTTC
TGGTGGAAAGGTTAATCAAATTGGATCTGTAACTGAGAGCATTGAAGCCG
TCAGAATGTCCAAGCAAGCTGGGTGGG