CX288586 | Citrus Genome Database

Overview


Name	CX288586
Unique Name	CX288586
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	527

Libraries


Library Name	Type
IF1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENOA_RAT (Alpha-enolase OS=Rattus norvegicus GN=Eno1 PE=1 SV=4)

HSP 1 Score: 160.229 bits (404), Expect = 1.875e-43
Identity = 84/125 (67.20%), Postives = 99/125 (79.20%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            LELL +AIAKAGYT +VVIGMDVAASEFY + K YDL+FK  + D S+ I+ D L DLYKSFI DYP+VSIEDPFDQDDW+ + K T+  G  +Q+VGDDL VTNPKR+ KA  EK+CN LLLKV
Sbjct:  224 LELLKSAIAKAGYTDQVVIGMDVAASEFYRAGK-YDLDFKSPD-DASRYITPDQLADLYKSFIKDYPVVSIEDPFDQDDWDAWQKFTATAG--IQVVGDDLTVTNPKRIAKAAGEKSCNCLLLKV 344

HSP 2 Score: 35.4242 bits (80), Expect = 1.875e-43
Identity = 14/23 (60.87%), Postives = 20/23 (86.96%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIGSVTES++A ++++  GW
Sbjct:  343 KVNQIGSVTESLQACKLAQSNGW 365

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENOA_BOVIN (Alpha-enolase OS=Bos taurus GN=ENO1 PE=1 SV=4)

HSP 1 Score: 160.229 bits (404), Expect = 1.875e-43
Identity = 84/125 (67.20%), Postives = 98/125 (78.40%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            LELL  AI KAGY+ KVVIGMDVAASEFY S K YDL+FK  + D S+ I+ D L +LYKSFI DYP+VSIEDPFDQDDWE + K T+  G  +Q+VGDDL VTNPKR+ KA+ EK+CN LLLKV
Sbjct:  224 LELLKNAIGKAGYSDKVVIGMDVAASEFYRSGK-YDLDFKSPD-DPSRYITPDELANLYKSFIRDYPVVSIEDPFDQDDWEAWQKFTASAG--IQVVGDDLTVTNPKRIAKAVSEKSCNCLLLKV 344

HSP 2 Score: 35.4242 bits (80), Expect = 1.875e-43
Identity = 14/23 (60.87%), Postives = 20/23 (86.96%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIGSVTES++A ++++  GW
Sbjct:  343 KVNQIGSVTESLQACKLAQSNGW 365

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENOG_CHICK (Gamma-enolase OS=Gallus gallus GN=ENO2 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.875e-43
Identity = 83/125 (66.40%), Postives = 99/125 (79.20%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            LELL  AI KAGYT K+VIGMDVAASEFY   K YDL+FK  + D S+ IS D L DLY+SF+  YP++SIEDPFDQDDWE ++K T+ VG  +QIVGDDL VTNPKR+E+A++EK CN LLLKV
Sbjct:  224 LELLKEAIDKAGYTDKIVIGMDVAASEFYRDGK-YDLDFKSPD-DPSRYISADELGDLYQSFVRAYPVLSIEDPFDQDDWEAWSKFTANVG--IQIVGDDLTVTNPKRIERAVEEKACNCLLLKV 344

HSP 2 Score: 35.8094 bits (81), Expect = 1.875e-43
Identity = 14/23 (60.87%), Postives = 21/23 (91.30%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIGSVTE+I+A +++++ GW
Sbjct:  343 KVNQIGSVTEAIQACKLAQENGW 365

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENOA_MOUSE (Alpha-enolase OS=Mus musculus GN=Eno1 PE=1 SV=3)

HSP 1 Score: 159.458 bits (402), Expect = 3.184e-43
Identity = 84/125 (67.20%), Postives = 98/125 (78.40%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            LELL TAIAKAGYT +VVIGMDVAASEFY S K YDL+FK  + D S+ I+ D L DLYKSF+ +YP+VSIEDPFDQDDW  + K T+  G  +Q+VGDDL VTNPKR+ KA  EK+CN LLLKV
Sbjct:  224 LELLKTAIAKAGYTDQVVIGMDVAASEFYRSGK-YDLDFKSPD-DPSRYITPDQLADLYKSFVQNYPVVSIEDPFDQDDWGAWQKFTASAG--IQVVGDDLTVTNPKRIAKAASEKSCNCLLLKV 344

HSP 2 Score: 35.4242 bits (80), Expect = 3.184e-43
Identity = 14/23 (60.87%), Postives = 20/23 (86.96%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIGSVTES++A ++++  GW
Sbjct:  343 KVNQIGSVTESLQACKLAQSNGW 365

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENOA_ANAPL (Alpha-enolase OS=Anas platyrhynchos GN=ENO1 PE=2 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 5.406e-43
Identity = 83/125 (66.40%), Postives = 96/125 (76.80%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            LELL TAI KAGY+ KVVIGMDVAASEFY   K YDL+FK  + D S+ IS D L DLYK F+ +YP+VSIEDPFDQDDW  + K T  VG  +Q+VGDDL VTNPKR+ KA++EK CN LLLKV
Sbjct:  224 LELLKTAIGKAGYSDKVVIGMDVAASEFYRDGK-YDLDFKSPD-DPSRYISPDQLADLYKGFVKNYPVVSIEDPFDQDDWGAWKKFTGSVG--IQVVGDDLTVTNPKRIAKAVEEKACNCLLLKV 344

HSP 2 Score: 35.4242 bits (80), Expect = 5.406e-43
Identity = 14/23 (60.87%), Postives = 20/23 (86.96%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIGSVTES++A ++++  GW
Sbjct:  343 KVNQIGSVTESLQACKLAQSNGW 365

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_FASHE (Enolase OS=Fasciola hepatica GN=ENO PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 5.407e-43
Identity = 82/125 (65.60%), Postives = 92/125 (73.60%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            LELL TAI KAGYTGKV I MD AASEFY   K YDL+FK   +  S  I+ DA+ D+YK  +S YPIVSIEDPFDQDDW  + KLT E   K+QIVGDDL VTNP RV+KAI +K CN LLLKV
Sbjct:  223 LELLRTAIDKAGYTGKVXIAMDCAASEFYKEGK-YDLDFKNPKSQASSWITSDAMADVYKKMMSTYPIVSIEDPFDQDDWPAWTKLTGEC--KIQIVGDDLTVTNPLRVQKAIDQKACNCLLLKV 344

HSP 2 Score: 38.5058 bits (88), Expect = 5.407e-43
Identity = 16/23 (69.57%), Postives = 22/23 (95.65%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIGSV+ESI+A +M+++AGW
Sbjct:  343 KVNQIGSVSESIKACKMAQEAGW 365

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO2_TOXGO (Enolase 2 OS=Toxoplasma gondii GN=ENO2 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 7.043e-43
Identity = 82/126 (65.08%), Postives = 98/126 (77.78%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTGKVVIGMDVAASEFY-GSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            L+LL  AI  +G+ GKV I  DVAASEF+   DK YDL+FK  NND SQ+ +G+ L++LYK     YP VSIEDPFDQDD+  YA+LT+EVGEKVQIVGDDLLVTNP R+EKA++EK CN LLLKV
Sbjct:  231 LDLLMEAIKVSGHEGKVKIAADVAASEFFLQDDKVYDLDFKTPNNDKSQRKTGEELRNLYKDLCQKYPFVSIEDPFDQDDFHSYAQLTNEVGEKVQIVGDDLLVTNPTRIEKAVQEKACNGLLLKV 356

HSP 2 Score: 31.5722 bits (70), Expect = 7.043e-43
Identity = 13/23 (56.52%), Postives = 20/23 (86.96%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG+V+ESIEA +++++  W
Sbjct:  355 KVNQIGTVSESIEACQLAQKNKW 377

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENOA_PYTRG (Alpha-enolase OS=Python regius PE=2 SV=3)

HSP 1 Score: 157.918 bits (398), Expect = 9.180e-43
Identity = 81/125 (64.80%), Postives = 98/125 (78.40%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            LELL TAI+KAGY  K+VIGMDVAASEFY   K YDL+FK  + D S+ I+ D L DLYK F+ +YP+VSIEDPFDQDDW  + K T+E G  +Q+VGDDL VTNPKR+ KA++EK+CN LLLKV
Sbjct:  224 LELLKTAISKAGYADKIVIGMDVAASEFYRDGK-YDLDFKSPD-DRSRYITPDQLADLYKGFVKNYPVVSIEDPFDQDDWPAWKKFTAESG--IQVVGDDLTVTNPKRIAKAVQEKSCNCLLLKV 344

HSP 2 Score: 35.4242 bits (80), Expect = 9.180e-43
Identity = 14/23 (60.87%), Postives = 20/23 (86.96%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIGSVTES++A ++++  GW
Sbjct:  343 KVNQIGSVTESLQACKLAQSNGW 365

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_LOLPE (Enolase OS=Loligo pealeii PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 9.180e-43
Identity = 77/125 (61.60%), Postives = 96/125 (76.80%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            LELL TAIA AGYT ++ IGMDVAASEF   +K YDL+FK  +++ +  ++ D L D+YK F+ +YP+VSIEDPFDQDDWE Y K+T ++   +QIVGDDLLVTNPKRV+K I  K  NALLLKV
Sbjct:  224 LELLKTAIANAGYTAEIEIGMDVAASEFC-KEKKYDLDFKNPDSNPNDWLTSDQLADVYKDFVKNYPVVSIEDPFDQDDWEAYTKMTKDM--DIQIVGDDLLVTNPKRVQKGIDLKAANALLLKV 345

HSP 2 Score: 40.817 bits (94), Expect = 9.180e-43
Identity = 18/23 (78.26%), Postives = 21/23 (91.30%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIGSVTESI+A +MS+ AGW
Sbjct:  344 KVNQIGSVTESIQACKMSQDAGW 366

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENOA_CHICK (Alpha-enolase OS=Gallus gallus GN=ENO1 PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 1.559e-42
Identity = 82/125 (65.60%), Postives = 97/125 (77.60%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            LELL TAI KAGY+ KVVIGMDVAASEFY   K YDL+FK  + D S+ IS D L DLY  F+ +YP+VSIEDPFDQDDW  + K T+ VG  +Q+VGDDL VTNPKR+ KA++EK+CN LLLKV
Sbjct:  224 LELLKTAIGKAGYSDKVVIGMDVAASEFYRDGK-YDLDFKSPD-DPSRYISPDQLADLYLGFVKNYPVVSIEDPFDQDDWAAWKKFTASVG--IQVVGDDLTVTNPKRIAKAVEEKSCNCLLLKV 344

HSP 2 Score: 35.4242 bits (80), Expect = 1.559e-42
Identity = 14/23 (60.87%), Postives = 20/23 (86.96%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIGSVTES++A ++++  GW
Sbjct:  343 KVNQIGSVTESLQACKLAQSNGW 365

The following BLAST results are available for this feature:

BLAST of CX288586 vs. ExPASy Swiss-Prot

BLAST of CX288586 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
ENOA_RAT	1.875e-43	67.20	Alpha-enolase OS=Rattus norvegicus GN=Eno1 PE=1 SV...	[more]
ENOA_BOVIN	1.875e-43	67.20	Alpha-enolase OS=Bos taurus GN=ENO1 PE=1 SV=4	[more]
ENOG_CHICK	1.875e-43	66.40	Gamma-enolase OS=Gallus gallus GN=ENO2 PE=2 SV=1	[more]
ENOA_MOUSE	3.184e-43	67.20	Alpha-enolase OS=Mus musculus GN=Eno1 PE=1 SV=3	[more]
ENOA_ANAPL	5.406e-43	66.40	Alpha-enolase OS=Anas platyrhynchos GN=ENO1 PE=2 S...	[more]
ENO_FASHE	5.407e-43	65.60	Enolase OS=Fasciola hepatica GN=ENO PE=2 SV=1	[more]
ENO2_TOXGO	7.043e-43	65.08	Enolase 2 OS=Toxoplasma gondii GN=ENO2 PE=1 SV=1	[more]
ENOA_PYTRG	9.180e-43	64.80	Alpha-enolase OS=Python regius PE=2 SV=3	[more]
ENO_LOLPE	9.180e-43	61.60	Enolase OS=Loligo pealeii PE=2 SV=1	[more]
ENOA_CHICK	1.559e-42	65.60	Alpha-enolase OS=Gallus gallus GN=ENO1 PE=2 SV=2	[more]

Pages

Properties


Property Name	Value
Genbank description	C02002A12SK IF1 Citrus clementina cDNA clone C02002A12, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX288586 ID=CX288586; Name=CX288586; organism=Citrus clementina; type=EST; length=527bp
GACTTGAATTGCTCAACACAGCCATTGCTAAAGCCGGTTACACAGGCAAA
GTTGTCATTGGAATGGATGTTGCTGCATCTGAATTCTATGGCTCAGATAA
GACTTATGATCTGAACTTCAAGGAAGAGAACAATGATGGTTCACAAAAGA
TCTCAGGAGATGCACTCAAAGATCTCTATAAGTCATTCATCTCTGATTAT
CCTATTGTATCAATTGAAGATCCATTTGACCAAGACGACTGGGAGCACTA
TGCCAAGCTAACCAGTGAGGTCGGAGAAAAAGTACAAATTGTTGGAGATG
ATCTTTTGGTCACCAATCCTAAGAGGGTTGAGAAGGCTATCAAAGAGAAG
ACCTGCAACGCCCTCCTTCTCAAGGTACTTCTTTAGTCCTTCTTTATTTG
GTCATTGGTTTACGACATTGTAAATGAAAATCTGTTCCTTCTCTCTGTTC
TGGTGGAAAGGTTAATCAAATTGGATCTGTAACTGAGAGCATTGAAGCCG
TCAGAATGTCCAAGCAAGCTGGGTGGG