CX288586 | Citrus Genome Database

Overview


Name	CX288586
Unique Name	CX288586
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	527

Libraries


Library Name	Type
IF1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_CAEEL (Enolase OS=Caenorhabditis elegans GN=enol-1 PE=1 SV=3)

HSP 1 Score: 153.68 bits (387), Expect = 1.559e-42
Identity = 76/125 (60.80%), Postives = 97/125 (77.60%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            L+LLNTAI KAGYTGK+ IGMDVAASEF+  D  YDL+FK   +D S+ +SG+ L +LY+SFI +YP+VSIED FDQDDW+++ K        +Q+VGDDL VTNPKR++ AI +K+CN LLLKV
Sbjct:  224 LDLLNTAIDKAGYTGKISIGMDVAASEFF-KDGKYDLDFKNPASDSSKWLSGEQLTELYQSFIKEYPVVSIEDAFDQDDWDNWGKFHG--ATSIQLVGDDLTVTNPKRIQTAIDKKSCNCLLLKV 345

HSP 2 Score: 38.891 bits (89), Expect = 1.559e-42
Identity = 17/23 (73.91%), Postives = 20/23 (86.96%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIGSVTESIEA ++S+  GW
Sbjct:  344 KVNQIGSVTESIEAAKLSRANGW 366

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENOA_TRASC (Alpha-enolase OS=Trachemys scripta PE=2 SV=3)

HSP 1 Score: 158.303 bits (399), Expect = 2.031e-42
Identity = 83/125 (66.40%), Postives = 98/125 (78.40%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            LELL TAI+KAGYT KVVIGMDVAASEFY   K YDL+FK  + D S+ I+ D L DLYKSFI  YP+VS+EDPFDQDDW  + K T+ VG  VQ+VGDDL VTNPKR+ K ++EK+CN LLL+V
Sbjct:  224 LELLKTAISKAGYTDKVVIGMDVAASEFYRDGK-YDLDFKSPD-DPSRYITPDQLADLYKSFIKSYPLVSVEDPFDQDDWSAWKKFTATVG--VQVVGDDLTVTNPKRIAKPVEEKSCNCLLLQV 344

HSP 2 Score: 33.8834 bits (76), Expect = 2.031e-42
Identity = 13/23 (56.52%), Postives = 20/23 (86.96%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            +VNQIGSVTES++A ++++  GW
Sbjct:  343 QVNQIGSVTESLQACKLAQSNGW 365

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENOG_HUMAN (Gamma-enolase OS=Homo sapiens GN=ENO2 PE=1 SV=3)

HSP 1 Score: 156.377 bits (394), Expect = 2.031e-42
Identity = 81/125 (64.80%), Postives = 97/125 (77.60%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            LEL+  AI KAGYT K+VIGMDVAASEFY   K YDL+FK    D S+ I+GD L  LY+ F+ DYP+VSIEDPFDQDDW  ++K T+ VG  +QIVGDDL VTNPKR+E+A++EK CN LLLKV
Sbjct:  224 LELVKEAIDKAGYTEKIVIGMDVAASEFYRDGK-YDLDFKSPT-DPSRYITGDQLGALYQDFVRDYPVVSIEDPFDQDDWAAWSKFTANVG--IQIVGDDLTVTNPKRIERAVEEKACNCLLLKV 344

HSP 2 Score: 35.8094 bits (81), Expect = 2.031e-42
Identity = 14/23 (60.87%), Postives = 21/23 (91.30%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIGSVTE+I+A +++++ GW
Sbjct:  343 KVNQIGSVTEAIQACKLAQENGW 365

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_NEOFR (Enolase OS=Neocallimastix frontalis PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 5.855e-42
Identity = 81/125 (64.80%), Postives = 99/125 (79.20%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            LELLN AIAKAGYTGKV IGMDVA+SEFY  D  YDL+FK  N+D S+ ISG+ L   YK   S+YPIVSIEDP+DQDD+E ++K  +++ +K+QIVGDDL VTNPKR+  AI++K CN LLLKV
Sbjct:  225 LELLNEAIAKAGYTGKVKIGMDVASSEFY-KDGKYDLDFKNPNSDPSKWISGEELGQFYKEITSEYPIVSIEDPYDQDDFESWSKFRADMQDKIQIVGDDLTVTNPKRIAMAIEKKACNGLLLKV 348

HSP 2 Score: 28.8758 bits (63), Expect = 5.855e-42
Identity = 13/23 (56.52%), Postives = 17/23 (73.91%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG+V+ESI+A   +   GW
Sbjct:  347 KVNQIGTVSESIQAALDAFNDGW 369

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENOA_ALLMI (Alpha-enolase OS=Alligator mississippiensis PE=2 SV=3)

HSP 1 Score: 154.836 bits (390), Expect = 7.630e-42
Identity = 80/125 (64.00%), Postives = 96/125 (76.80%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            LELL  AI KAGY+ K+VIGMDVAASEFY   K YDL+FK  + D S+ I+ D L DLYKSF+ +YP+VSIEDPFDQDDW  + K T+ VG  +Q+VGDDL VTNPKR+ KA+ +K CN LLLKV
Sbjct:  224 LELLKNAINKAGYSDKIVIGMDVAASEFYRDGK-YDLDFKSPD-DPSRYITPDQLADLYKSFVKNYPVVSIEDPFDQDDWAAWKKFTASVG--IQVVGDDLTVTNPKRIAKAVDDKACNCLLLKV 344

HSP 2 Score: 35.4242 bits (80), Expect = 7.630e-42
Identity = 14/23 (60.87%), Postives = 20/23 (86.96%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIGSVTES++A ++++  GW
Sbjct:  343 KVNQIGSVTESLQACKLAQSNGW 365

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_ALLMI (Enolase (Fragment) OS=Alligator mississippiensis PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 7.638e-42
Identity = 80/125 (64.00%), Postives = 96/125 (76.80%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            LELL  AI KAGY+ K+VIGMDVAASEFY   K YDL+FK  + D S+ I+ D L DLYKSF+ +YP+VSIEDPFDQDDW  + K T+ VG  +Q+VGDDL VTNPKR+ KA+ +K CN LLLKV
Sbjct:  202 LELLKNAINKAGYSDKIVIGMDVAASEFYRDGK-YDLDFKSPD-DPSRYITPDQLADLYKSFVKNYPVVSIEDPFDQDDWAAWKKFTASVG--IQVVGDDLTVTNPKRIAKAVDDKACNCLLLKV 322

HSP 2 Score: 35.4242 bits (80), Expect = 7.638e-42
Identity = 14/23 (60.87%), Postives = 20/23 (86.96%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIGSVTES++A ++++  GW
Sbjct:  321 KVNQIGSVTESLQACKLAQSNGW 343

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENOA_SCEUN (Alpha-enolase OS=Sceloporus undulatus PE=2 SV=3)

HSP 1 Score: 154.066 bits (388), Expect = 1.688e-41
Identity = 79/125 (63.20%), Postives = 97/125 (77.60%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            LELL +AI+KAGYT K+VIGMDVAASEFY   K YDL+FK  + D S+ I+ D L DLYK FI +YP+VSIEDPFDQ DW  + K T+  G  +Q+VGDDL VTNP+R+ KA++EK+CN LLLKV
Sbjct:  224 LELLKSAISKAGYTDKIVIGMDVAASEFYRDGK-YDLDFKSPD-DPSRYITPDQLSDLYKGFIKNYPVVSIEDPFDQHDWAAWKKFTASAG--IQVVGDDLTVTNPRRITKAVEEKSCNCLLLKV 344

HSP 2 Score: 35.039 bits (79), Expect = 1.688e-41
Identity = 14/23 (60.87%), Postives = 20/23 (86.96%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIGSVTES++A ++++  GW
Sbjct:  343 KVNQIGSVTESLQACKLAQTNGW 365

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENOG_MOUSE (Gamma-enolase OS=Mus musculus GN=Eno2 PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 2.199e-41
Identity = 80/125 (64.00%), Postives = 97/125 (77.60%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            LEL+  AI KAGYT K+VIGMDVAASEFY   K YDL+FK    D S+ I+GD L  LY+ F+ +YP+VSIEDPFDQDDW  ++K T+ VG  +QIVGDDL VTNPKR+E+A++EK CN LLLKV
Sbjct:  224 LELVKEAIDKAGYTEKMVIGMDVAASEFYRDGK-YDLDFKSPA-DPSRYITGDQLGALYQDFVRNYPVVSIEDPFDQDDWAAWSKFTANVG--IQIVGDDLTVTNPKRIERAVEEKACNCLLLKV 344

HSP 2 Score: 35.8094 bits (81), Expect = 2.199e-41
Identity = 14/23 (60.87%), Postives = 21/23 (91.30%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIGSVTE+I+A +++++ GW
Sbjct:  343 KVNQIGSVTEAIQACKLAQENGW 365

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_EIMTE (Enolase OS=Eimeria tenella GN=ENO PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.865e-41
Identity = 77/126 (61.11%), Postives = 95/126 (75.40%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSD-KTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            L LL  AI  AG+ GKV I  DVAASEFY  + K+YDL+FK    D  + ++GD LKDL+K +  ++PIVSIEDPFDQDD+  YA LT+E+G KVQ+VGDDLLVTNP R+ KA++ K CNALLLKV
Sbjct:  231 LGLLVEAIRAAGHEGKVKIMADVAASEFYSKEAKSYDLDFKSPAADAHRLLTGDQLKDLFKEWSEEFPIVSIEDPFDQDDFSSYAALTAEIGSKVQVVGDDLLVTNPARIRKALQHKACNALLLKV 356

HSP 2 Score: 36.5798 bits (83), Expect = 2.865e-41
Identity = 14/23 (60.87%), Postives = 21/23 (91.30%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIGS+TE+IEA ++++ +GW
Sbjct:  355 KVNQIGSITEAIEACKLAQASGW 377

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENOG_RAT (Gamma-enolase OS=Rattus norvegicus GN=Eno2 PE=1 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.866e-41
Identity = 80/125 (64.00%), Postives = 97/125 (77.60%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            LEL+  AI KAGYT K+VIGMDVAASEFY   K YDL+FK    D S+ I+GD L  LY+ F+ +YP+VSIEDPFDQDDW  ++K T+ VG  +QIVGDDL VTNPKR+E+A++EK CN LLLKV
Sbjct:  224 LELVKEAIDKAGYTEKMVIGMDVAASEFYRDGK-YDLDFKSPA-DPSRCITGDQLGALYQDFVRNYPVVSIEDPFDQDDWAAWSKFTANVG--IQIVGDDLTVTNPKRIERAVEEKACNCLLLKV 344

HSP 2 Score: 35.8094 bits (81), Expect = 2.866e-41
Identity = 14/23 (60.87%), Postives = 21/23 (91.30%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIGSVTE+I+A +++++ GW
Sbjct:  343 KVNQIGSVTEAIQACKLAQENGW 365

The following BLAST results are available for this feature:

BLAST of CX288586 vs. ExPASy Swiss-Prot

BLAST of CX288586 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
ENO_CAEEL	1.559e-42	60.80	Enolase OS=Caenorhabditis elegans GN=enol-1 PE=1 S...	[more]
ENOA_TRASC	2.031e-42	66.40	Alpha-enolase OS=Trachemys scripta PE=2 SV=3	[more]
ENOG_HUMAN	2.031e-42	64.80	Gamma-enolase OS=Homo sapiens GN=ENO2 PE=1 SV=3	[more]
ENO_NEOFR	5.855e-42	64.80	Enolase OS=Neocallimastix frontalis PE=3 SV=1	[more]
ENOA_ALLMI	7.630e-42	64.00	Alpha-enolase OS=Alligator mississippiensis PE=2 S...	[more]
ENO_ALLMI	7.638e-42	64.00	Enolase (Fragment) OS=Alligator mississippiensis P...	[more]
ENOA_SCEUN	1.688e-41	63.20	Alpha-enolase OS=Sceloporus undulatus PE=2 SV=3	[more]
ENOG_MOUSE	2.199e-41	64.00	Gamma-enolase OS=Mus musculus GN=Eno2 PE=1 SV=2	[more]
ENO_EIMTE	2.865e-41	61.11	Enolase OS=Eimeria tenella GN=ENO PE=2 SV=1	[more]
ENOG_RAT	2.866e-41	64.00	Gamma-enolase OS=Rattus norvegicus GN=Eno2 PE=1 SV...	[more]

Pages

Properties


Property Name	Value
Genbank description	C02002A12SK IF1 Citrus clementina cDNA clone C02002A12, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX288586 ID=CX288586; Name=CX288586; organism=Citrus clementina; type=EST; length=527bp
GACTTGAATTGCTCAACACAGCCATTGCTAAAGCCGGTTACACAGGCAAA
GTTGTCATTGGAATGGATGTTGCTGCATCTGAATTCTATGGCTCAGATAA
GACTTATGATCTGAACTTCAAGGAAGAGAACAATGATGGTTCACAAAAGA
TCTCAGGAGATGCACTCAAAGATCTCTATAAGTCATTCATCTCTGATTAT
CCTATTGTATCAATTGAAGATCCATTTGACCAAGACGACTGGGAGCACTA
TGCCAAGCTAACCAGTGAGGTCGGAGAAAAAGTACAAATTGTTGGAGATG
ATCTTTTGGTCACCAATCCTAAGAGGGTTGAGAAGGCTATCAAAGAGAAG
ACCTGCAACGCCCTCCTTCTCAAGGTACTTCTTTAGTCCTTCTTTATTTG
GTCATTGGTTTACGACATTGTAAATGAAAATCTGTTCCTTCTCTCTGTTC
TGGTGGAAAGGTTAATCAAATTGGATCTGTAACTGAGAGCATTGAAGCCG
TCAGAATGTCCAAGCAAGCTGGGTGGG