CX288586 | Citrus Genome Database

Overview


Name	CX288586
Unique Name	CX288586
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	527

Libraries


Library Name	Type
IF1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_PSEPF (Enolase OS=Pseudomonas fluorescens (strain Pf0-1) GN=eno PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 6.833e-22
Identity = 49/126 (38.89%), Postives = 75/126 (59.52%), Query Frame = 3

Query:    3 LELLNTAIAKAGYT--GKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 374
            L++++ A+A AGY     V + +D AASEF+  D  Y+L+ +       Q  + +   D  K     YPI+SIED  D+ DW  +  LT ++GEK Q+VGDDL VTN K +++ I +K  N++L+K
Sbjct:  223 LKVISEAVANAGYKLGTDVTLALDCAASEFF-EDGKYNLSGE------GQVFTAEGFADYLKGLTERYPIISIEDGLDESDWAGWKILTDKIGEKTQLVGDDLFVTNTKILKEGIDKKIANSILIK 341

HSP 2 Score: 33.4982 bits (75), Expect = 6.833e-22
Identity = 13/23 (56.52%), Postives = 21/23 (91.30%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            K NQIG++TE++EA++M+K AG+
Sbjct:  341 KFNQIGTLTETLEAIQMAKAAGY 363

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_PSE14 (Enolase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=eno PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 6.833e-22
Identity = 52/126 (41.27%), Postives = 78/126 (61.90%), Query Frame = 3

Query:    3 LELLNTAIAKAGYT--GKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 374
            L+ +  A+A AGYT    V + +D AASEFY + K Y L+   E  + S     + L +L +     +PI+SIED  D+ DW+ +  LT ++GEKVQ+VGDDL VTN K +++ I +K  N++L+K
Sbjct:  223 LDAIAEAVANAGYTLGTDVTLALDCAASEFYKNGK-YKLS---EEGEYSSAEFAEYLAELTRK----HPIISIEDGLDESDWDGWKVLTDKIGEKVQLVGDDLFVTNTKILKEGIDKKIANSILIK 340

HSP 2 Score: 34.6538 bits (78), Expect = 6.833e-22
Identity = 14/23 (60.87%), Postives = 21/23 (91.30%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            K NQIGS+TE++EA++M+K AG+
Sbjct:  340 KFNQIGSLTETLEAIQMAKAAGY 362

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_ANADF (Enolase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=eno PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 6.833e-22
Identity = 54/128 (42.19%), Postives = 72/128 (56.25%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYG-SDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            L L+  AI +AG      V + +D AASEF+  S   YDL  + +  DG        L D Y S  + YPIVSIED   +DDW  +  LT  +G K+Q+VGDDL VTN  R+ + I E   N++L+KV
Sbjct:  219 LALIMKAIEQAGLKAGDDVGLALDCAASEFFEKSSGKYDLEGEGKAFDGK------GLVDFYASLAAKYPIVSIEDGCAEDDWATWKLLTERLGSKLQLVGDDLFVTNVTRLSRGIAEGVANSILVKV 340

HSP 2 Score: 36.965 bits (84), Expect = 6.833e-22
Identity = 16/23 (69.57%), Postives = 22/23 (95.65%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIGS+TE++EAVRM+ +AG+
Sbjct:  339 KVNQIGSLTETLEAVRMAHRAGY 361

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO2_CHLTE (Enolase 2 OS=Chlorobium tepidum GN=eno2 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 8.886e-22
Identity = 52/137 (37.96%), Postives = 83/137 (60.58%), Query Frame = 3

Query:    3 LELLNTAIAKAGYT------------GKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            +EL+  AI  AGY             G V+I +D A+SEFY ++K   + FK+ +    +++S + +   +  + S YPI+SIED   +DDWE +  LT ++G +VQ+VGDDL VTN KR+ + I++   N++L+KV
Sbjct:  218 IELVIEAIGMAGYKAGAPTDRGGLGDGHVMIALDPASSEFYDAEKKKYV-FKKSSG---RELSSEEMASYWADWASRYPIISIEDGMAEDDWEGWKMLTDKIGGRVQLVGDDLFVTNSKRLAEGIEKGVGNSILIKV 350

HSP 2 Score: 31.187 bits (69), Expect = 8.886e-22
Identity = 11/23 (47.83%), Postives = 21/23 (91.30%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+++A+ ++K+ G+
Sbjct:  349 KVNQIGTLTETLQAIELAKRNGY 371

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_BORGA (Enolase OS=Borrelia garinii GN=eno PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.886e-22
Identity = 47/127 (37.01%), Postives = 78/127 (61.42%), Query Frame = 3

Query:    6 ELLNTAIAKAGYT-GK-VVIGMDVAASEFYG-SDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            E++  AI KAGY  GK + I +D A SE Y    K Y L +  +     ++++ + + + +  ++  YPI+SIED   ++DW+ + KLT ++G K+Q+VGDDL VTN   ++K I+    N++L+KV
Sbjct:  221 EMIIEAIKKAGYEPGKDIAIALDPATSELYDPKTKKYVLKWSTK-----EELTSEQMVEYWSKWVEKYPIISIEDGMAEEDWDGWKKLTDKIGHKIQLVGDDLFVTNTSFLKKGIEMGVANSILIKV 342

HSP 2 Score: 35.4242 bits (80), Expect = 8.886e-22
Identity = 15/23 (65.22%), Postives = 21/23 (91.30%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+ EAV M+K+AG+
Sbjct:  341 KVNQIGTLTETFEAVEMAKKAGY 363

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_BORAP (Enolase OS=Borrelia afzelii (strain PKo) GN=eno PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.887e-22
Identity = 47/127 (37.01%), Postives = 78/127 (61.42%), Query Frame = 3

Query:    6 ELLNTAIAKAGYT-GK-VVIGMDVAASEFYG-SDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            E++  AI KAGY  GK + I +D A SE Y    K Y L +  +     ++++ + + + +  ++  YPI+SIED   ++DW+ + KLT ++G K+Q+VGDDL VTN   ++K I+    N++L+KV
Sbjct:  221 EMIIEAIKKAGYEPGKDIAIALDPATSELYDPKTKKYVLKWSTK-----EELTSEQMVEYWSKWVEKYPIISIEDGMAEEDWDGWKKLTDKIGHKIQLVGDDLFVTNTSFLKKGIEMGVANSILIKV 342

HSP 2 Score: 35.4242 bits (80), Expect = 8.887e-22
Identity = 15/23 (65.22%), Postives = 21/23 (91.30%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+ EAV M+K+AG+
Sbjct:  341 KVNQIGTLTETFEAVEMAKKAGY 363

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_LISW6 (Enolase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=eno PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.888e-22
Identity = 49/128 (38.28%), Postives = 79/128 (61.72%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDK-TYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            LE +  AI  AGY    +V + MD A+SEFY  +   Y+L       +G  + S + +   Y+  I+ YPI+SIED  D++DW+ +  LT  +G++VQ+VGDDL VTN  ++++ I++   N++L+KV
Sbjct:  219 LETIMQAIKDAGYKPGEEVKLAMDAASSEFYNRETGKYELK-----GEGVTRTS-EEMVTWYEEMITKYPIISIEDGLDENDWDGFKLLTERIGDRVQLVGDDLFVTNTTKLKEGIEKGIANSILIKV 340

HSP 2 Score: 34.6538 bits (78), Expect = 8.888e-22
Identity = 13/23 (56.52%), Postives = 22/23 (95.65%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+++A+ M+K+AG+
Sbjct:  339 KVNQIGTLTETLDAIEMAKRAGY 361

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_LISMO (Enolase OS=Listeria monocytogenes GN=eno PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.888e-22
Identity = 49/128 (38.28%), Postives = 79/128 (61.72%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDK-TYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            LE +  AI  AGY    +V + MD A+SEFY  +   Y+L       +G  + S + +   Y+  I+ YPI+SIED  D++DW+ +  LT  +G++VQ+VGDDL VTN  ++++ I++   N++L+KV
Sbjct:  219 LETIMQAIKDAGYKPGEEVKLAMDAASSEFYNRETGKYELK-----GEGVTRTS-EEMVTWYEEMITKYPIISIEDGLDENDWDGFKLLTERIGDRVQLVGDDLFVTNTTKLKEGIEKGIANSILIKV 340

HSP 2 Score: 34.6538 bits (78), Expect = 8.888e-22
Identity = 13/23 (56.52%), Postives = 22/23 (95.65%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+++A+ M+K+AG+
Sbjct:  339 KVNQIGTLTETLDAIEMAKRAGY 361

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_LISMH (Enolase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=eno PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.888e-22
Identity = 49/128 (38.28%), Postives = 79/128 (61.72%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDK-TYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            LE +  AI  AGY    +V + MD A+SEFY  +   Y+L       +G  + S + +   Y+  I+ YPI+SIED  D++DW+ +  LT  +G++VQ+VGDDL VTN  ++++ I++   N++L+KV
Sbjct:  219 LETIMQAIKDAGYKPGEEVKLAMDAASSEFYNRETGKYELK-----GEGVTRTS-EEMVTWYEEMITKYPIISIEDGLDENDWDGFKLLTERIGDRVQLVGDDLFVTNTTKLKEGIEKGIANSILIKV 340

HSP 2 Score: 34.6538 bits (78), Expect = 8.888e-22
Identity = 13/23 (56.52%), Postives = 22/23 (95.65%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+++A+ M+K+AG+
Sbjct:  339 KVNQIGTLTETLDAIEMAKRAGY 361

[Close]

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_LISMF (Enolase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=eno PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.888e-22
Identity = 49/128 (38.28%), Postives = 79/128 (61.72%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDK-TYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            LE +  AI  AGY    +V + MD A+SEFY  +   Y+L       +G  + S + +   Y+  I+ YPI+SIED  D++DW+ +  LT  +G++VQ+VGDDL VTN  ++++ I++   N++L+KV
Sbjct:  219 LETIMQAIKDAGYKPGEEVKLAMDAASSEFYNRETGKYELK-----GEGVTRTS-EEMVTWYEEMITKYPIISIEDGLDENDWDGFKLLTERIGDRVQLVGDDLFVTNTTKLKEGIEKGIANSILIKV 340

HSP 2 Score: 34.6538 bits (78), Expect = 8.888e-22
Identity = 13/23 (56.52%), Postives = 22/23 (95.65%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+++A+ M+K+AG+
Sbjct:  339 KVNQIGTLTETLDAIEMAKRAGY 361

The following BLAST results are available for this feature:

BLAST of CX288586 vs. ExPASy Swiss-Prot

BLAST of CX288586 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
ENO_PSEPF	6.833e-22	38.89	Enolase OS=Pseudomonas fluorescens (strain Pf0-1) ...	[more]
ENO_PSE14	6.833e-22	41.27	Enolase OS=Pseudomonas syringae pv. phaseolicola (...	[more]
ENO_ANADF	6.833e-22	42.19	Enolase OS=Anaeromyxobacter sp. (strain Fw109-5) G...	[more]
ENO2_CHLTE	8.886e-22	37.96	Enolase 2 OS=Chlorobium tepidum GN=eno2 PE=3 SV=1	[more]
ENO_BORGA	8.886e-22	37.01	Enolase OS=Borrelia garinii GN=eno PE=3 SV=1	[more]
ENO_BORAP	8.887e-22	37.01	Enolase OS=Borrelia afzelii (strain PKo) GN=eno PE...	[more]
ENO_LISW6	8.888e-22	38.28	Enolase OS=Listeria welshimeri serovar 6b (strain ...	[more]
ENO_LISMO	8.888e-22	38.28	Enolase OS=Listeria monocytogenes GN=eno PE=1 SV=1	[more]
ENO_LISMH	8.888e-22	38.28	Enolase OS=Listeria monocytogenes serotype 4a (str...	[more]
ENO_LISMF	8.888e-22	38.28	Enolase OS=Listeria monocytogenes serotype 4b (str...	[more]

Pages

Properties


Property Name	Value
Genbank description	C02002A12SK IF1 Citrus clementina cDNA clone C02002A12, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX288586 ID=CX288586; Name=CX288586; organism=Citrus clementina; type=EST; length=527bp
GACTTGAATTGCTCAACACAGCCATTGCTAAAGCCGGTTACACAGGCAAA
GTTGTCATTGGAATGGATGTTGCTGCATCTGAATTCTATGGCTCAGATAA
GACTTATGATCTGAACTTCAAGGAAGAGAACAATGATGGTTCACAAAAGA
TCTCAGGAGATGCACTCAAAGATCTCTATAAGTCATTCATCTCTGATTAT
CCTATTGTATCAATTGAAGATCCATTTGACCAAGACGACTGGGAGCACTA
TGCCAAGCTAACCAGTGAGGTCGGAGAAAAAGTACAAATTGTTGGAGATG
ATCTTTTGGTCACCAATCCTAAGAGGGTTGAGAAGGCTATCAAAGAGAAG
ACCTGCAACGCCCTCCTTCTCAAGGTACTTCTTTAGTCCTTCTTTATTTG
GTCATTGGTTTACGACATTGTAAATGAAAATCTGTTCCTTCTCTCTGTTC
TGGTGGAAAGGTTAATCAAATTGGATCTGTAACTGAGAGCATTGAAGCCG
TCAGAATGTCCAAGCAAGCTGGGTGGG