CX288586 | Citrus Genome Database

Overview


Name	CX288586
Unique Name	CX288586
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	527

Libraries


Library Name	Type
IF1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_STAAW (Enolase OS=Staphylococcus aureus (strain MW2) GN=eno PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.307e-21
Identity = 48/127 (37.80%), Postives = 80/127 (62.99%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            +E +  AI  AGY    +V +G D A+SEFY  +  YD + K E   G+++ + + + D  +  +  YPI++IED  D++DW+ + +LT  +G++VQ+VGDDL VTN + + K I+    N++L+KV
Sbjct:  221 VETIIQAIEAAGYKPGEEVFLGFDCASSEFY-ENGVYDYS-KFEGEHGAKRTAAEQV-DYLEQLVDKYPIITIEDGMDENDWDGWKQLTERIGDRVQLVGDDLFVTNTEILAKGIENGIGNSILIKV 344

HSP 2 Score: 32.3426 bits (72), Expect = 4.307e-21
Identity = 12/23 (52.17%), Postives = 21/23 (91.30%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+ +A+ M+++AG+
Sbjct:  343 KVNQIGTLTETFDAIEMAQKAGY 365

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_STAAU (Enolase OS=Staphylococcus aureus GN=eno PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.307e-21
Identity = 48/127 (37.80%), Postives = 80/127 (62.99%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            +E +  AI  AGY    +V +G D A+SEFY  +  YD + K E   G+++ + + + D  +  +  YPI++IED  D++DW+ + +LT  +G++VQ+VGDDL VTN + + K I+    N++L+KV
Sbjct:  221 VETIIQAIEAAGYKPGEEVFLGFDCASSEFY-ENGVYDYS-KFEGEHGAKRTAAEQV-DYLEQLVDKYPIITIEDGMDENDWDGWKQLTERIGDRVQLVGDDLFVTNTEILAKGIENGIGNSILIKV 344

HSP 2 Score: 32.3426 bits (72), Expect = 4.307e-21
Identity = 12/23 (52.17%), Postives = 21/23 (91.30%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+ +A+ M+++AG+
Sbjct:  343 KVNQIGTLTETFDAIEMAQKAGY 365

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_STAAT (Enolase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=eno PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.307e-21
Identity = 48/127 (37.80%), Postives = 80/127 (62.99%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            +E +  AI  AGY    +V +G D A+SEFY  +  YD + K E   G+++ + + + D  +  +  YPI++IED  D++DW+ + +LT  +G++VQ+VGDDL VTN + + K I+    N++L+KV
Sbjct:  221 VETIIQAIEAAGYKPGEEVFLGFDCASSEFY-ENGVYDYS-KFEGEHGAKRTAAEQV-DYLEQLVDKYPIITIEDGMDENDWDGWKQLTERIGDRVQLVGDDLFVTNTEILAKGIENGIGNSILIKV 344

HSP 2 Score: 32.3426 bits (72), Expect = 4.307e-21
Identity = 12/23 (52.17%), Postives = 21/23 (91.30%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+ +A+ M+++AG+
Sbjct:  343 KVNQIGTLTETFDAIEMAQKAGY 365

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_STAAS (Enolase OS=Staphylococcus aureus (strain MSSA476) GN=eno PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.307e-21
Identity = 48/127 (37.80%), Postives = 80/127 (62.99%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            +E +  AI  AGY    +V +G D A+SEFY  +  YD + K E   G+++ + + + D  +  +  YPI++IED  D++DW+ + +LT  +G++VQ+VGDDL VTN + + K I+    N++L+KV
Sbjct:  221 VETIIQAIEAAGYKPGEEVFLGFDCASSEFY-ENGVYDYS-KFEGEHGAKRTAAEQV-DYLEQLVDKYPIITIEDGMDENDWDGWKQLTERIGDRVQLVGDDLFVTNTEILAKGIENGIGNSILIKV 344

HSP 2 Score: 32.3426 bits (72), Expect = 4.307e-21
Identity = 12/23 (52.17%), Postives = 21/23 (91.30%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+ +A+ M+++AG+
Sbjct:  343 KVNQIGTLTETFDAIEMAQKAGY 365

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_STAAR (Enolase OS=Staphylococcus aureus (strain MRSA252) GN=eno PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.307e-21
Identity = 48/127 (37.80%), Postives = 80/127 (62.99%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            +E +  AI  AGY    +V +G D A+SEFY  +  YD + K E   G+++ + + + D  +  +  YPI++IED  D++DW+ + +LT  +G++VQ+VGDDL VTN + + K I+    N++L+KV
Sbjct:  221 VETIIQAIEAAGYKPGEEVFLGFDCASSEFY-ENGVYDYS-KFEGEHGAKRTAAEQV-DYLEQLVDKYPIITIEDGMDENDWDGWKQLTERIGDRVQLVGDDLFVTNTEILAKGIENGIGNSILIKV 344

HSP 2 Score: 32.3426 bits (72), Expect = 4.307e-21
Identity = 12/23 (52.17%), Postives = 21/23 (91.30%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+ +A+ M+++AG+
Sbjct:  343 KVNQIGTLTETFDAIEMAQKAGY 365

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_STAAN (Enolase OS=Staphylococcus aureus (strain N315) GN=eno PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.307e-21
Identity = 48/127 (37.80%), Postives = 80/127 (62.99%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            +E +  AI  AGY    +V +G D A+SEFY  +  YD + K E   G+++ + + + D  +  +  YPI++IED  D++DW+ + +LT  +G++VQ+VGDDL VTN + + K I+    N++L+KV
Sbjct:  221 VETIIQAIEAAGYKPGEEVFLGFDCASSEFY-ENGVYDYS-KFEGEHGAKRTAAEQV-DYLEQLVDKYPIITIEDGMDENDWDGWKQLTERIGDRVQLVGDDLFVTNTEILAKGIENGIGNSILIKV 344

HSP 2 Score: 32.3426 bits (72), Expect = 4.307e-21
Identity = 12/23 (52.17%), Postives = 21/23 (91.30%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+ +A+ M+++AG+
Sbjct:  343 KVNQIGTLTETFDAIEMAQKAGY 365

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_STAAM (Enolase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=eno PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.307e-21
Identity = 48/127 (37.80%), Postives = 80/127 (62.99%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            +E +  AI  AGY    +V +G D A+SEFY  +  YD + K E   G+++ + + + D  +  +  YPI++IED  D++DW+ + +LT  +G++VQ+VGDDL VTN + + K I+    N++L+KV
Sbjct:  221 VETIIQAIEAAGYKPGEEVFLGFDCASSEFY-ENGVYDYS-KFEGEHGAKRTAAEQV-DYLEQLVDKYPIITIEDGMDENDWDGWKQLTERIGDRVQLVGDDLFVTNTEILAKGIENGIGNSILIKV 344

HSP 2 Score: 32.3426 bits (72), Expect = 4.307e-21
Identity = 12/23 (52.17%), Postives = 21/23 (91.30%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+ +A+ M+++AG+
Sbjct:  343 KVNQIGTLTETFDAIEMAQKAGY 365

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_STAAE (Enolase OS=Staphylococcus aureus (strain Newman) GN=eno PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.307e-21
Identity = 48/127 (37.80%), Postives = 80/127 (62.99%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            +E +  AI  AGY    +V +G D A+SEFY  +  YD + K E   G+++ + + + D  +  +  YPI++IED  D++DW+ + +LT  +G++VQ+VGDDL VTN + + K I+    N++L+KV
Sbjct:  221 VETIIQAIEAAGYKPGEEVFLGFDCASSEFY-ENGVYDYS-KFEGEHGAKRTAAEQV-DYLEQLVDKYPIITIEDGMDENDWDGWKQLTERIGDRVQLVGDDLFVTNTEILAKGIENGIGNSILIKV 344

HSP 2 Score: 32.3426 bits (72), Expect = 4.307e-21
Identity = 12/23 (52.17%), Postives = 21/23 (91.30%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+ +A+ M+++AG+
Sbjct:  343 KVNQIGTLTETFDAIEMAQKAGY 365

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_STAAC (Enolase OS=Staphylococcus aureus (strain COL) GN=eno PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.307e-21
Identity = 48/127 (37.80%), Postives = 80/127 (62.99%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            +E +  AI  AGY    +V +G D A+SEFY  +  YD + K E   G+++ + + + D  +  +  YPI++IED  D++DW+ + +LT  +G++VQ+VGDDL VTN + + K I+    N++L+KV
Sbjct:  221 VETIIQAIEAAGYKPGEEVFLGFDCASSEFY-ENGVYDYS-KFEGEHGAKRTAAEQV-DYLEQLVDKYPIITIEDGMDENDWDGWKQLTERIGDRVQLVGDDLFVTNTEILAKGIENGIGNSILIKV 344

HSP 2 Score: 32.3426 bits (72), Expect = 4.307e-21
Identity = 12/23 (52.17%), Postives = 21/23 (91.30%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+ +A+ M+++AG+
Sbjct:  343 KVNQIGTLTETFDAIEMAQKAGY 365

BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_STAAB (Enolase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=eno PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.307e-21
Identity = 48/127 (37.80%), Postives = 80/127 (62.99%), Query Frame = 3

Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            +E +  AI  AGY    +V +G D A+SEFY  +  YD + K E   G+++ + + + D  +  +  YPI++IED  D++DW+ + +LT  +G++VQ+VGDDL VTN + + K I+    N++L+KV
Sbjct:  221 VETIIQAIEAAGYKPGEEVFLGFDCASSEFY-ENGVYDYS-KFEGEHGAKRTAAEQV-DYLEQLVDKYPIITIEDGMDENDWDGWKQLTERIGDRVQLVGDDLFVTNTEILAKGIENGIGNSILIKV 344

HSP 2 Score: 32.3426 bits (72), Expect = 4.307e-21
Identity = 12/23 (52.17%), Postives = 21/23 (91.30%), Query Frame = 2

Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+ +A+ M+++AG+
Sbjct:  343 KVNQIGTLTETFDAIEMAQKAGY 365

The following BLAST results are available for this feature:

BLAST of CX288586 vs. ExPASy Swiss-Prot

BLAST of CX288586 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
ENO_STAAW	4.307e-21	37.80	Enolase OS=Staphylococcus aureus (strain MW2) GN=e...	[more]
ENO_STAAU	4.307e-21	37.80	Enolase OS=Staphylococcus aureus GN=eno PE=1 SV=1	[more]
ENO_STAAT	4.307e-21	37.80	Enolase OS=Staphylococcus aureus (strain USA300 / ...	[more]
ENO_STAAS	4.307e-21	37.80	Enolase OS=Staphylococcus aureus (strain MSSA476) ...	[more]
ENO_STAAR	4.307e-21	37.80	Enolase OS=Staphylococcus aureus (strain MRSA252) ...	[more]
ENO_STAAN	4.307e-21	37.80	Enolase OS=Staphylococcus aureus (strain N315) GN=...	[more]
ENO_STAAM	4.307e-21	37.80	Enolase OS=Staphylococcus aureus (strain Mu50 / AT...	[more]
ENO_STAAE	4.307e-21	37.80	Enolase OS=Staphylococcus aureus (strain Newman) G...	[more]
ENO_STAAC	4.307e-21	37.80	Enolase OS=Staphylococcus aureus (strain COL) GN=e...	[more]
ENO_STAAB	4.307e-21	37.80	Enolase OS=Staphylococcus aureus (strain bovine RF...	[more]

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Properties


Property Name	Value
Genbank description	C02002A12SK IF1 Citrus clementina cDNA clone C02002A12, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX288586 ID=CX288586; Name=CX288586; organism=Citrus clementina; type=EST; length=527bp
GACTTGAATTGCTCAACACAGCCATTGCTAAAGCCGGTTACACAGGCAAA
GTTGTCATTGGAATGGATGTTGCTGCATCTGAATTCTATGGCTCAGATAA
GACTTATGATCTGAACTTCAAGGAAGAGAACAATGATGGTTCACAAAAGA
TCTCAGGAGATGCACTCAAAGATCTCTATAAGTCATTCATCTCTGATTAT
CCTATTGTATCAATTGAAGATCCATTTGACCAAGACGACTGGGAGCACTA
TGCCAAGCTAACCAGTGAGGTCGGAGAAAAAGTACAAATTGTTGGAGATG
ATCTTTTGGTCACCAATCCTAAGAGGGTTGAGAAGGCTATCAAAGAGAAG
ACCTGCAACGCCCTCCTTCTCAAGGTACTTCTTTAGTCCTTCTTTATTTG
GTCATTGGTTTACGACATTGTAAATGAAAATCTGTTCCTTCTCTCTGTTC
TGGTGGAAAGGTTAATCAAATTGGATCTGTAACTGAGAGCATTGAAGCCG
TCAGAATGTCCAAGCAAGCTGGGTGGG