CX288586

Overview
NameCX288586
Unique NameCX288586
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length527
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_PELCD (Enolase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=eno PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 4.308e-21
Identity = 49/127 (38.58%), Postives = 75/127 (59.06%), Query Frame = 3
Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            LE++  AI  AGY     V++ +DVAASE Y   K Y+L      N+     +   L D Y   +  YPI+SIED   ++DW+ +  LT ++G+++QIVGDDL VTN K  ++ I +   N++L+K+
Sbjct:  219 LEVIMEAIKAAGYKPGEDVLLALDVAASELYADGK-YNLA-----NEAQPLKTAAELTDFYADLVDRYPIISIEDGMAENDWDGWKILTDKLGKRIQIVGDDLFVTNTKIFKEGIDKGIANSILIKL 339          

HSP 2 Score: 34.6538 bits (78), Expect = 4.308e-21
Identity = 13/23 (56.52%), Postives = 22/23 (95.65%), Query Frame = 2
Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            K+NQIG++TE++EA+ M+K+AG+
Sbjct:  338 KLNQIGTLTETLEAIEMAKRAGY 360          
BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_CALS8 (Enolase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=eno PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.603e-21
Identity = 50/127 (39.37%), Postives = 79/127 (62.20%), Query Frame = 3
Query:    3 LELLNTAIAKAGYT-GK-VVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            LE++  AI KAGYT GK + I +D A SE Y +++    +F+ E    ++    + + + +   +  YPIVSIED   ++DWE +  LT  +G+K+Q+VGDDL VTN KR+ K I+    N++L+K+
Sbjct:  222 LEVIVEAIEKAGYTPGKDIAIALDPATSELY-NEEDGKYHFEREGKVRTK----EEMVEFWVKLVEKYPIVSIEDGVAEEDWEGWKMLTEALGKKIQLVGDDLFVTNTKRLAKGIELGVANSILIKL 343          

HSP 2 Score: 32.7278 bits (73), Expect = 5.603e-21
Identity = 12/23 (52.17%), Postives = 21/23 (91.30%), Query Frame = 2
Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            K+NQIG++TE++EA+ M+ +AG+
Sbjct:  342 KLNQIGTLTETLEAIEMANRAGY 364          
BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_XYLFT (Enolase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=eno PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 5.604e-21
Identity = 50/127 (39.37%), Postives = 76/127 (59.84%), Query Frame = 3
Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            L+ +  AI +AGY     V++G+DVA+SEF  + K    N   EN    ++++ +   D     ++ YPI+SIED   +DDW  + +LT  +G KVQ+VGDDL VTNPK  ++ I     NA+L+K+
Sbjct:  221 LDAILEAIGRAGYIAGEDVLLGLDVASSEFRNNGK---YNLVGEN----KRLTSEQFVDFLDDLVAQYPIISIEDGLAEDDWVGWKQLTERIGHKVQLVGDDLFVTNPKVFQEGITSGIANAILIKL 340          

HSP 2 Score: 27.7202 bits (60), Expect = 5.604e-21
Identity = 10/21 (47.62%), Postives = 19/21 (90.48%), Query Frame = 2
Query:  458 KVNQIGSVTESIEAVRMSKQA 520
            K+NQIG++TE++E++ M+ +A
Sbjct:  339 KLNQIGTLTETLESIAMAHRA 359          
BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_XYLF2 (Enolase OS=Xylella fastidiosa (strain M23) GN=eno PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 5.604e-21
Identity = 50/127 (39.37%), Postives = 76/127 (59.84%), Query Frame = 3
Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            L+ +  AI +AGY     V++G+DVA+SEF  + K    N   EN    ++++ +   D     ++ YPI+SIED   +DDW  + +LT  +G KVQ+VGDDL VTNPK  ++ I     NA+L+K+
Sbjct:  221 LDAILEAIGRAGYIAGEDVLLGLDVASSEFRNNGK---YNLVGEN----KRLTSEQFVDFLDDLVAQYPIISIEDGLAEDDWVGWKQLTERIGHKVQLVGDDLFVTNPKVFQEGITSGIANAILIKL 340          

HSP 2 Score: 27.7202 bits (60), Expect = 5.604e-21
Identity = 10/21 (47.62%), Postives = 19/21 (90.48%), Query Frame = 2
Query:  458 KVNQIGSVTESIEAVRMSKQA 520
            K+NQIG++TE++E++ M+ +A
Sbjct:  339 KLNQIGTLTETLESIAMAHRA 359          
BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_SYNPW (Enolase OS=Synechococcus sp. (strain WH7803) GN=eno PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.604e-21
Identity = 53/126 (42.06%), Postives = 76/126 (60.32%), Query Frame = 3
Query:    6 ELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            E+L  AI KAGY    ++ + +DVA++EF+ +D  Y         DG    S + +  L K  +  +PIVSIED   +DDWE +  LT  +G KVQ+VGDDL VTN KR+++ I   T N++L+KV
Sbjct:  223 EILVEAIEKAGYKPGEQISLALDVASTEFF-ADGRYAF-------DGGSYDSAEMVGQLEK-LVEQFPIVSIEDGLAEDDWEGWKLLTERLGSKVQLVGDDLFVTNTKRLQQGIDSSTANSILIKV 339          

HSP 2 Score: 30.0314 bits (66), Expect = 5.604e-21
Identity = 11/23 (47.83%), Postives = 21/23 (91.30%), Query Frame = 2
Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIGS+TE+++A+ ++ ++G+
Sbjct:  338 KVNQIGSLTETLQAIDLAGRSGY 360          
BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_SHEON (Enolase OS=Shewanella oneidensis GN=eno PE=3 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 5.604e-21
Identity = 51/127 (40.16%), Postives = 71/127 (55.91%), Query Frame = 3
Query:    3 LELLNTAIAKAGYT--GKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKI-SGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 374
            L ++  A+  AGY     V + +D AASEFY  D  YDL        G  K+   +   D  KS    YPIVSIED  D+ DW+ +A  T  +G+K+Q+VGDDL VTN K + + I+    N++L+K
Sbjct:  223 LAVIKEAVELAGYKLGTDVTLALDCAASEFY-KDGKYDLA-------GEGKVFDSNGFSDFLKSLTEQYPIVSIEDGLDESDWDGWAYQTQIMGDKIQLVGDDLFVTNTKILTRGIENGIANSILIK 341          

HSP 2 Score: 33.8834 bits (76), Expect = 5.604e-21
Identity = 14/23 (60.87%), Postives = 20/23 (86.96%), Query Frame = 2
Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            K NQIGS+TE++ A+RM+K AG+
Sbjct:  341 KFNQIGSLTETLAAIRMAKAAGY 363          
BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_ALCBS (Enolase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=eno PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 5.604e-21
Identity = 49/126 (38.89%), Postives = 73/126 (57.94%), Query Frame = 3
Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 374
            LE +  AI  AGY     V + +D AASEFY  D  Y L  ++ +      ++ +   D        YPI+SIED  D+ DW+ +  LT ++G+KVQ+VGDDL VTN + +++ I EK  N++L+K
Sbjct:  223 LEAIMEAIEIAGYKAGDDVTLALDCAASEFY-KDGKYVLAGEDRS------MNSEEFADYLAELCDRYPIISIEDGMDESDWDGWKILTEKLGKKVQLVGDDLFVTNTRILQRGIDEKVANSILIK 341          

HSP 2 Score: 34.2686 bits (77), Expect = 5.604e-21
Identity = 13/23 (56.52%), Postives = 21/23 (91.30%), Query Frame = 2
Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            K NQIGS+TE+++A++M+K AG+
Sbjct:  341 KFNQIGSLTETLDAIKMAKDAGY 363          
BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_DEHE1 (Enolase OS=Dehalococcoides ethenogenes (strain 195) GN=eno PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.604e-21
Identity = 50/127 (39.37%), Postives = 76/127 (59.84%), Query Frame = 3
Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            +E++  AI KAGY     + I +D A+SE Y  D  Y L  + +       +S   + D +  ++  YPI+SIED   +DDW+ +  LT ++G KVQ+VGDD  VTN KR+E+ IKE   N++L+K+
Sbjct:  220 VEVILKAIEKAGYRPGEDIFIALDPASSELY-QDGKYTLATENKT------LSSAEMVDYWCGWVEKYPIISIEDGLFEDDWDGWKMLTKKIGSKVQLVGDDFYVTNIKRLERGIKENASNSILIKL 339          

HSP 2 Score: 30.0314 bits (66), Expect = 5.604e-21
Identity = 10/23 (43.48%), Postives = 19/23 (82.61%), Query Frame = 2
Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            K+NQIG+++E+I A++M+  + W
Sbjct:  338 KLNQIGTLSETIAAIKMANNSAW 360          
BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_POLNA (Enolase OS=Polaromonas naphthalenivorans (strain CJ2) GN=eno PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.604e-21
Identity = 48/134 (35.82%), Postives = 77/134 (57.46%), Query Frame = 3
Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALK-------DLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            ++++  AI KAGY    ++ +G+D AASEFY               DG  ++SG+ L        D+  +++  YPI+SIED   + DW+ +  LT  +G+ VQIVGDDL VTN K +++ I +   N++L+K+
Sbjct:  220 IQMILEAIDKAGYVAGEQIALGLDCAASEFY--------------KDGKYELSGEGLSLSAQEWTDMLATWVDKYPIISIEDGMAEGDWDGWKILTDRLGKNVQIVGDDLFVTNTKILKEGIDKGIANSILIKI 339          

HSP 2 Score: 32.3426 bits (72), Expect = 5.604e-21
Identity = 12/23 (52.17%), Postives = 20/23 (86.96%), Query Frame = 2
Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            K+NQIG++TE+  A+ M+K+AG+
Sbjct:  338 KINQIGTLTETFAAIEMAKRAGY 360          
BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_SYNAS (Enolase OS=Syntrophus aciditrophicus (strain SB) GN=eno PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.604e-21
Identity = 50/127 (39.37%), Postives = 76/127 (59.84%), Query Frame = 3
Query:    3 LELLNTAIAKAGYT-GK-VVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            L ++  AI +AGY  GK + I +D AAS FY   K Y L  +++        + D +   Y+   + YPI+S+ED   +DDWE +  LT  +G ++QIVGDDL VTN KR+E+ I +   N++L+K+
Sbjct:  219 LAVIMAAITRAGYEPGKDIAIALDAAASSFYEKGK-YILAAEKKPEK-----TADEMIRFYEDLANRYPIISLEDGLAEDDWEGWKALTQAMGSRIQIVGDDLFVTNKKRLEQGISKGIANSILIKL 339          

HSP 2 Score: 32.7278 bits (73), Expect = 5.604e-21
Identity = 12/23 (52.17%), Postives = 21/23 (91.30%), Query Frame = 2
Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            K+NQIGS+TE++E ++ +K+AG+
Sbjct:  338 KLNQIGSLTETLETIQTAKEAGY 360          
The following BLAST results are available for this feature:
BLAST of CX288586 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_PELCD4.308e-2138.58Enolase OS=Pelobacter carbinolicus (strain DSM 238... [more]
ENO_CALS85.603e-2139.37Enolase OS=Caldicellulosiruptor saccharolyticus (s... [more]
ENO_XYLFT5.604e-2139.37Enolase OS=Xylella fastidiosa (strain Temecula1 / ... [more]
ENO_XYLF25.604e-2139.37Enolase OS=Xylella fastidiosa (strain M23) GN=eno ... [more]
ENO_SYNPW5.604e-2142.06Enolase OS=Synechococcus sp. (strain WH7803) GN=en... [more]
ENO_SHEON5.604e-2140.16Enolase OS=Shewanella oneidensis GN=eno PE=3 SV=2[more]
ENO_ALCBS5.604e-2138.89Enolase OS=Alcanivorax borkumensis (strain SK2 / A... [more]
ENO_DEHE15.604e-2139.37Enolase OS=Dehalococcoides ethenogenes (strain 195... [more]
ENO_POLNA5.604e-2135.82Enolase OS=Polaromonas naphthalenivorans (strain C... [more]
ENO_SYNAS5.604e-2139.37Enolase OS=Syntrophus aciditrophicus (strain SB) G... [more]

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Properties
Property NameValue
Genbank descriptionC02002A12SK IF1 Citrus clementina cDNA clone C02002A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288586 ID=CX288586; Name=CX288586; organism=Citrus clementina; type=EST; length=527bp
GACTTGAATTGCTCAACACAGCCATTGCTAAAGCCGGTTACACAGGCAAA
GTTGTCATTGGAATGGATGTTGCTGCATCTGAATTCTATGGCTCAGATAA
GACTTATGATCTGAACTTCAAGGAAGAGAACAATGATGGTTCACAAAAGA
TCTCAGGAGATGCACTCAAAGATCTCTATAAGTCATTCATCTCTGATTAT
CCTATTGTATCAATTGAAGATCCATTTGACCAAGACGACTGGGAGCACTA
TGCCAAGCTAACCAGTGAGGTCGGAGAAAAAGTACAAATTGTTGGAGATG
ATCTTTTGGTCACCAATCCTAAGAGGGTTGAGAAGGCTATCAAAGAGAAG
ACCTGCAACGCCCTCCTTCTCAAGGTACTTCTTTAGTCCTTCTTTATTTG
GTCATTGGTTTACGACATTGTAAATGAAAATCTGTTCCTTCTCTCTGTTC
TGGTGGAAAGGTTAATCAAATTGGATCTGTAACTGAGAGCATTGAAGCCG
TCAGAATGTCCAAGCAAGCTGGGTGGG
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