CX288586

Overview
NameCX288586
Unique NameCX288586
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length527
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_VARPS (Enolase OS=Variovorax paradoxus (strain S110) GN=eno PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.604e-20
Identity = 47/134 (35.07%), Postives = 78/134 (58.21%), Query Frame = 3
Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALK-------DLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            ++L+  AI KAG+    ++ +G+D AASEFY               DG+  +SG+ L        D+  +++  YPI+SIED   + DW+ +  LT  +G++VQ+VGDDL VTN K +++ I +   N++L+K+
Sbjct:  219 IQLILEAIDKAGFVAGEQIALGLDCAASEFY--------------KDGNYVLSGENLTLSAGNWADMLATWVDKYPIISIEDGMHEGDWDGWKLLTERLGKRVQLVGDDLFVTNTKILQEGIDKGIANSILIKI 338          

HSP 2 Score: 32.3426 bits (72), Expect = 1.604e-20
Identity = 12/23 (52.17%), Postives = 20/23 (86.96%), Query Frame = 2
Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            K+NQIG++TE+  A+ M+K+AG+
Sbjct:  337 KINQIGTLTETFAAIEMAKRAGY 359          
BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_MAGSM (Enolase OS=Magnetococcus sp. (strain MC-1) GN=eno PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.604e-20
Identity = 46/128 (35.94%), Postives = 75/128 (58.59%), Query Frame = 3
Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDK-TYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            L+++  AI  AGY     + + +D A+SEFY  +   YDL  +       + ++   L   Y+  ++ YPI+SIED FD+ DW+ +  +T  +G K+Q+VGDDL VTN K + + I +   N++L+KV
Sbjct:  219 LKVIVEAIEAAGYKPGEDIKLALDCASSEFYNKETGNYDLTGE------GRVLTKQELVAFYEDLVAKYPIISIEDGFDESDWDGWKLMTEALGNKIQLVGDDLFVTNSKILAEGISKGIANSILVKV 340          

HSP 2 Score: 33.8834 bits (76), Expect = 1.604e-20
Identity = 14/23 (60.87%), Postives = 21/23 (91.30%), Query Frame = 2
Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+ EAV M+++AG+
Sbjct:  339 KVNQIGTLTETFEAVEMAQRAGY 361          
BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_PSEMY (Enolase OS=Pseudomonas mendocina (strain ymp) GN=eno PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.604e-20
Identity = 51/127 (40.16%), Postives = 71/127 (55.91%), Query Frame = 3
Query:    3 LELLNTAIAKAGYT--GKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDA-LKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 374
            L  +  A+A AGY     V + +D A+SEF+  D  YDL       +G  K+   A   D        YPI+SIED  D+ DW  +  LT ++G KVQ+VGDDL VTN K +++ I EK  N++L+K
Sbjct:  223 LAAIAEAVANAGYKLGDDVTLALDCASSEFF-KDGKYDL-------EGEGKVFDAAGFADYLAGLTQRYPIISIEDGMDESDWAGWKVLTDKIGAKVQLVGDDLFVTNTKILKRGIDEKIGNSILIK 341          

HSP 2 Score: 34.2686 bits (77), Expect = 1.604e-20
Identity = 14/23 (60.87%), Postives = 21/23 (91.30%), Query Frame = 2
Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            K NQIGS+TE++EA++M+K AG+
Sbjct:  341 KFNQIGSLTETLEAIQMAKAAGF 363          
BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_PARL1 (Enolase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=eno PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.605e-20
Identity = 46/121 (38.02%), Postives = 71/121 (58.68%), Query Frame = 3
Query:   21 AIAKAGYT--GKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            AI KAGY     + + +D A++EF+  +  Y+L  +       +K+    + D +   +  YPI+SIED   +DDWE +  LT  +G KVQ+VGDDL VTN +R+   I + T N++L+KV
Sbjct:  224 AIEKAGYKPGDDIYLALDAASTEFF-KNGVYNLQGE------GKKLDAGGMVDYWADLVGKYPIISIEDGMAEDDWEGWKALTDRIGSKVQLVGDDLFVTNKRRLADGIAKGTANSILVKV 337          

HSP 2 Score: 31.5722 bits (70), Expect = 1.605e-20
Identity = 13/23 (56.52%), Postives = 20/23 (86.96%), Query Frame = 2
Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIGS+TE++E+V M+ +A +
Sbjct:  336 KVNQIGSLTETLESVEMAHKASY 358          
BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_PELLD (Enolase OS=Pelodictyon luteolum (strain DSM 273) GN=eno PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.086e-20
Identity = 49/137 (35.77%), Postives = 84/137 (61.31%), Query Frame = 3
Query:    3 LELLNTAIAKAGYTG------------KVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            +EL+  AI KAGY              +V+I +D A+SEFY ++K   + FK+ +    +++S + +   ++ + + YPI+SIED   +DDW  +  LT ++G++VQ+VGDDL VTN  R+ + I++   N++L+KV
Sbjct:  218 IELVVEAIGKAGYKAGSPASKGGLGDAQVMIALDPASSEFYDTEKKKYV-FKKSDK---RELSSEEMASYWEGWANTYPIISIEDGMAEDDWAGWKLLTEKIGDRVQLVGDDLFVTNSLRLAEGIEKGVGNSILIKV 350          

HSP 2 Score: 29.6462 bits (65), Expect = 2.086e-20
Identity = 11/23 (47.83%), Postives = 20/23 (86.96%), Query Frame = 2
Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE++ A+ ++K+ G+
Sbjct:  349 KVNQIGTLTETLRAIDLAKRNGY 371          
BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_LAWIP (Enolase OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=eno PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.086e-20
Identity = 48/126 (38.10%), Postives = 78/126 (61.90%), Query Frame = 3
Query:    6 ELLNTAIAKAGYT--GKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            + L  AI +AGY    +V++ +DVAASEFY  DK Y L       +    ++ + + +  K F S YP++SIED   ++DW+ + +LT E+G  +Q+VGDD+ VTNP  + + ++E   N++L+KV
Sbjct:  220 QYLVKAIEEAGYNPGSEVMLAIDVAASEFY-KDKRYFLT------EYKTPLNSEEMIEWLKGFTSRYPLISIEDGLAENDWDGWRELTVELGNDIQLVGDDIFVTNPIMLSQGVEEGIGNSILIKV 338          

HSP 2 Score: 30.0314 bits (66), Expect = 2.086e-20
Identity = 10/23 (43.48%), Postives = 20/23 (86.96%), Query Frame = 2
Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            KVNQIG++TE+++ + ++KQ+ +
Sbjct:  337 KVNQIGTLTETLDTIELAKQSAY 359          
BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_PASMU (Enolase OS=Pasteurella multocida GN=eno PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.086e-20
Identity = 53/127 (41.73%), Postives = 78/127 (61.42%), Query Frame = 3
Query:    3 LELLNTAIAKAGYT-GK-VVIGMDVAASEFYGSDK-TYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 374
            L  +  A+ KAGY  GK V + MD A+SEFY  +   Y++  K E    + +     L++L K    +YPIVSIED  D+ DWE +A  T  +G+KVQ+VGDDL VTN K +++ I++   N++L+K
Sbjct:  223 LACIKEAVEKAGYVLGKDVTLAMDCASSEFYNKENGMYEM--KGEGKSFTSQEFTHYLEELCK----EYPIVSIEDGQDESDWEGFAYQTKVLGDKVQLVGDDLFVTNTKILKEGIEKGIANSILIK 343          

HSP 2 Score: 33.113 bits (74), Expect = 2.086e-20
Identity = 13/23 (56.52%), Postives = 20/23 (86.96%), Query Frame = 2
Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            K NQIGS+TE++ A++M+K AG+
Sbjct:  343 KFNQIGSLTETLAAIKMAKDAGY 365          
BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_SACD2 (Enolase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=eno PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.087e-20
Identity = 47/126 (37.30%), Postives = 73/126 (57.94%), Query Frame = 3
Query:    3 LELLNTAIAKAGYT--GKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 374
            LE +  A+A AGY    ++ + +D A+SEFY  D  YD++ +       +K S +   D      S YPI+SIED  D+ DW+ +  LT ++G   Q+VGDDL VTN K +++ I +   N++L+K
Sbjct:  223 LEAIAEAVAAAGYKLGEEITLALDCASSEFY-KDGVYDMSGE------GKKFSPEEFADYLAELASKYPILSIEDGMDESDWDGWKVLTEKIGSTCQLVGDDLFVTNTKILKEGIDKSIANSILIK 341          

HSP 2 Score: 31.9574 bits (71), Expect = 2.087e-20
Identity = 11/23 (47.83%), Postives = 22/23 (95.65%), Query Frame = 2
Query:  458 KVNQIGSVTESIEAVRMSKQAGW 526
            K NQIGS++E+++A++M+++AG+
Sbjct:  341 KFNQIGSLSETLDAIKMAQEAGY 363          
BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_RHOSK (Enolase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=eno PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.087e-20
Identity = 50/127 (39.37%), Postives = 76/127 (59.84%), Query Frame = 3
Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            L+ +  +I KAGY     + + +D A++E++   K       E   +G    S + + D   +  +DYPI+SIED   +DDWE +  LT ++G KVQ+VGDDL VTNPKR+E+ IK    N++L+KV
Sbjct:  219 LDYILRSIEKAGYKPGEDIYLALDCASTEYFKGGKY------EMKGEGKSLTSAENV-DYLAALCADYPIISIEDGCAEDDWEGWKLLTDKLGAKVQLVGDDLFVTNPKRLEQGIKAGVANSMLVKV 338          

HSP 2 Score: 28.4906 bits (62), Expect = 2.087e-20
Identity = 13/21 (61.90%), Postives = 18/21 (85.71%), Query Frame = 2
Query:  458 KVNQIGSVTESIEAVRMSKQA 520
            KVNQIGS+TE++ AV M+ +A
Sbjct:  337 KVNQIGSLTETLMAVDMAHRA 357          
BLAST of CX288586 vs. ExPASy Swiss-Prot
Match: ENO_RHOS4 (Enolase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=eno PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.087e-20
Identity = 50/127 (39.37%), Postives = 76/127 (59.84%), Query Frame = 3
Query:    3 LELLNTAIAKAGYTG--KVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 377
            L+ +  +I KAGY     + + +D A++E++   K       E   +G    S + + D   +  +DYPI+SIED   +DDWE +  LT ++G KVQ+VGDDL VTNPKR+E+ IK    N++L+KV
Sbjct:  219 LDYILRSIEKAGYKPGEDIYLALDCASTEYFKGGKY------EMKGEGKSLTSAENV-DYLAALCADYPIISIEDGCAEDDWEGWKLLTDKLGAKVQLVGDDLFVTNPKRLEQGIKAGVANSMLVKV 338          

HSP 2 Score: 28.4906 bits (62), Expect = 2.087e-20
Identity = 13/21 (61.90%), Postives = 18/21 (85.71%), Query Frame = 2
Query:  458 KVNQIGSVTESIEAVRMSKQA 520
            KVNQIGS+TE++ AV M+ +A
Sbjct:  337 KVNQIGSLTETLMAVDMAHRA 357          
The following BLAST results are available for this feature:
BLAST of CX288586 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_VARPS1.604e-2035.07Enolase OS=Variovorax paradoxus (strain S110) GN=e... [more]
ENO_MAGSM1.604e-2035.94Enolase OS=Magnetococcus sp. (strain MC-1) GN=eno ... [more]
ENO_PSEMY1.604e-2040.16Enolase OS=Pseudomonas mendocina (strain ymp) GN=e... [more]
ENO_PARL11.605e-2038.02Enolase OS=Parvibaculum lavamentivorans (strain DS... [more]
ENO_PELLD2.086e-2035.77Enolase OS=Pelodictyon luteolum (strain DSM 273) G... [more]
ENO_LAWIP2.086e-2038.10Enolase OS=Lawsonia intracellularis (strain PHE/MN... [more]
ENO_PASMU2.086e-2041.73Enolase OS=Pasteurella multocida GN=eno PE=3 SV=1[more]
ENO_SACD22.087e-2037.30Enolase OS=Saccharophagus degradans (strain 2-40 /... [more]
ENO_RHOSK2.087e-2039.37Enolase OS=Rhodobacter sphaeroides (strain KD131 /... [more]
ENO_RHOS42.087e-2039.37Enolase OS=Rhodobacter sphaeroides (strain ATCC 17... [more]

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Properties
Property NameValue
Genbank descriptionC02002A12SK IF1 Citrus clementina cDNA clone C02002A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288586 ID=CX288586; Name=CX288586; organism=Citrus clementina; type=EST; length=527bp
GACTTGAATTGCTCAACACAGCCATTGCTAAAGCCGGTTACACAGGCAAA
GTTGTCATTGGAATGGATGTTGCTGCATCTGAATTCTATGGCTCAGATAA
GACTTATGATCTGAACTTCAAGGAAGAGAACAATGATGGTTCACAAAAGA
TCTCAGGAGATGCACTCAAAGATCTCTATAAGTCATTCATCTCTGATTAT
CCTATTGTATCAATTGAAGATCCATTTGACCAAGACGACTGGGAGCACTA
TGCCAAGCTAACCAGTGAGGTCGGAGAAAAAGTACAAATTGTTGGAGATG
ATCTTTTGGTCACCAATCCTAAGAGGGTTGAGAAGGCTATCAAAGAGAAG
ACCTGCAACGCCCTCCTTCTCAAGGTACTTCTTTAGTCCTTCTTTATTTG
GTCATTGGTTTACGACATTGTAAATGAAAATCTGTTCCTTCTCTCTGTTC
TGGTGGAAAGGTTAATCAAATTGGATCTGTAACTGAGAGCATTGAAGCCG
TCAGAATGTCCAAGCAAGCTGGGTGGG
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