CX288589

Overview
NameCX288589
Unique NameCX288589
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length446
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL28_ORYSJ (Beta-glucosidase 28 OS=Oryza sativa subsp. japonica GN=BGLU28 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.360e-27
Identity = 61/149 (40.94%), Postives = 86/149 (57.72%), Query Frame = 1
Query:    4 IGILLDFVWYEPLTR-SKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQD-WNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            +GI     W+EP    S AD  A  RA DF +GWF+HP+ +GEYP  M+ +VG RLP FT E+ +M++GS DF+G+N YT+ Y             Y  D W     Y +N +PIGP A +   +N P G+ + L+Y+K  Y NPT+ +
Sbjct:  259 VGITQVSHWFEPYDAGSAADRRARRRALDFMLGWFMHPVAHGEYPPAMRRLVGGRLPAFTAEQSEMLRGSFDFIGLNYYTSNYAVAAPPPNKLHPSYLTDNWVNATGY-RNSIPIGPPAYTPIFFNYPPGLRELLLYVKRRYNNPTIYI 406          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL35_ORYSJ (Putative beta-glucosidase 35 OS=Oryza sativa subsp. japonica GN=BGLU35 PE=3 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 3.956e-27
Identity = 59/148 (39.86%), Postives = 86/148 (58.11%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            +IG+++   W+ P   + AD  A  R+ DF  GWF+ P+V+G+YP TM+  +G+RLPKFT  +  MVKGS DF+GIN YT YY          ++ Y  D  A     +NG PIGP+    + +N P G+ + L+Y K  Y NP + +
Sbjct:  266 QIGMVVVTHWFVPYDDTAADRGAVQRSLDFMFGWFMDPLVHGDYPGTMRGWLGDRLPKFTPAQSAMVKGSYDFIGINYYTTYYAKSVPPPNSNELSYDVDSRANTTGFRNGKPIGPQFTPIF-FNYPPGIREVLLYTKRRYNNPAIYI 412          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL29_ORYSJ (Beta-glucosidase 29 OS=Oryza sativa subsp. japonica GN=BGLU29 PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 3.956e-27
Identity = 58/146 (39.73%), Postives = 81/146 (55.48%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTV 438
            +IGI     W+ P   + AD     R+ DF  GWF+ PIV+G+YP TM+  +G RLP FT E+   V+GS DF+G+N YT YY     L    ++ Y  D  A     +NG PIGP+  +   +N P G+ + L+Y K  Y NP +
Sbjct:  249 QIGITAVSHWFVPYNDTAADRRVVQRSLDFMYGWFLDPIVHGDYPGTMRGWLGARLPAFTAEQAAAVRGSYDFIGVNYYTTYYAKSVPLPSSNRLSYDTDIRANTTGFRNGKPIGPQEFTPIFFNYPPGLRELLLYTKRRYNNPII 394          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL04_ORYSJ (Beta-glucosidase 4 OS=Oryza sativa subsp. japonica GN=BGLU4 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.956e-27
Identity = 58/151 (38.41%), Postives = 91/151 (60.26%), Query Frame = 1
Query:    4 IGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYM------YDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTV 438
            +G+++D  W EP +    D  AA R  DF +GW++ PI +G+YP++M+  +G+ LP F++++ + ++  IDFVGIN YT+ ++       D +  + +QV   + WN G   EK    IG RA S WL+ VPWG+ K L Y  + YGNP +
Sbjct:  233 VGLVVDCEWAEPFSEKTEDQVAAERRLDFQLGWYLDPIYFGDYPESMRQRLGDDLPTFSEKDKEFIRNKIDFVGINHYTSRFIAHHQDPEDIYFYRVQQVERIEKWNTG---EK----IGERAASEWLFIVPWGLRKLLNYAAKRYGNPVI 376          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL34_ARATH (Myrosinase 4 OS=Arabidopsis thaliana GN=TGG4 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 5.166e-27
Identity = 65/145 (44.83%), Postives = 87/145 (60.00%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTR-SKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNP 432
            +IG  L   W+ PL   S+ D  AA RA DF VGWF+ P+VYG+YP  M+ +VG+RLP+FT E+  +VKGS+DF+G+N Y   Y  D     P Q+    D      + +NGVPIG  A S+  Y  P G  + L YIK++Y NP
Sbjct:  272 KIGTTLIGRWFAPLNEFSELDKAAAKRAFDFFVGWFLDPLVYGKYPTIMREMVGDRLPEFTPEQSALVKGSLDFLGLNYYVTQYATD--APPPTQLNAITDARVTLGFYRNGVPIGVVAPSFVYY--PPGFRQILNYIKDNYKNP 412          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL35_ARATH (Myrosinase 5 OS=Arabidopsis thaliana GN=TGG5 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.151e-26
Identity = 65/145 (44.83%), Postives = 87/145 (60.00%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTR-SKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNP 432
            +IG  L   W+ PL   S+ D  AA RA DF VGWF+ P+VYG+YP  M+ +VG+RLP+FT EE  +VKGS+DF+G+N Y + Y  D     P Q     D      + +NG PIG  A+S+  Y  P G  + L YIK++Y NP
Sbjct:  272 KIGTTLIGRWFVPLNEFSELDKAAAKRAFDFFVGWFLDPLVYGKYPTIMREMVGDRLPEFTPEESALVKGSLDFLGLNYYVSQYATD--APPPTQPNAITDARVTLGFYRNGSPIGVVASSFVYY--PPGFRQILNYIKDNYKNP 412          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL27_ORYSJ (Beta-glucosidase 27 OS=Oryza sativa subsp. japonica GN=BGLU27 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.151e-26
Identity = 63/151 (41.72%), Postives = 93/151 (61.59%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQV--GYXQD-WNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            +IGI     W+ P + + AD +A  R+ DF  GWF+ PIV+G+YP TM+ +VG+RLPKFT E+ ++VKGS DF+G+N YT  Y     L++P ++   Y  D W    AY +NGVPIGP A +   +    G+ + L+Y K  Y +P + +
Sbjct:  257 QIGITQVSHWFVPYSDAAADKHAVRRSLDFMYGWFMDPIVFGDYPGTMRKLVGDRLPKFTAEQSELVKGSYDFIGLNYYTTNYAKSV-LRRPSKLKPAYATDNWVNQTAY-RNGVPIGPPAFTKIFFTYAPGLRELLLYTKRKYNDPDIYI 405          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL39_ARATH (Putative myrosinase 3 OS=Arabidopsis thaliana GN=TGG3 PE=5 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.503e-26
Identity = 58/148 (39.19%), Postives = 87/148 (58.78%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            +IG+++   W+ P   ++A+  A  R ++F +GWF+ P+  G+YP  M+ +VG RLPKF K+E K+VKGS DF+GIN Y   Y+Y      P ++    D  + F+YE    PIGP  N+   Y+ P G+   L + K  YGNP V +
Sbjct:  238 QIGVVMITRWFVPYDSTQANIDATERNKEFFLGWFMEPLTKGKYPDIMRKLVGRRLPKFNKKEAKLVKGSYDFLGINYYQTQYVYAIPANPPNRLTVLNDSLSAFSYENKDGPIGPWFNADSYYH-PRGILNVLEHFKTKYGNPLVYI 384          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL11_ARATH (Beta-glucosidase 11 OS=Arabidopsis thaliana GN=BGLU11 PE=2 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 1.963e-26
Identity = 59/136 (43.38%), Postives = 80/136 (58.82%), Query Frame = 1
Query:   37 PLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            PLT S  D  A  R  DF++GW +HP+V+G+YP+TM+  VG+RLP FT+EE + VKG+ DFVG+  Y A Y+ D        +   QD+N   A E   V      N Y   N PW + + L+Y+KE YGNP V +
Sbjct:  290 PLTNSVKDKQATARVNDFYIGWILHPLVFGDYPETMKTNVGSRLPAFTEEESEQVKGAFDFVGVINYMALYVKDNSSSLKPNL---QDFNTDIAVEMTLVGNTSIENEY--ANTPWSLQQILLYVKETYGNPPVYI 420          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL31_ORYSJ (Beta-glucosidase 31 OS=Oryza sativa subsp. japonica GN=BGLU31 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 6.315e-25
Identity = 61/153 (39.87%), Postives = 87/153 (56.86%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQV-GYXQD----WNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            +IG+ L   WYEP T+   D  AA R  DFH+GW++HP+VYG+YP  M+  VG+RLP FT EE K V  S DFVG N Y A ++     K  + +  Y  D    ++  F    N  P+G    S ++ + PW + K L +++E Y NP V++
Sbjct:  261 QIGLTLLGWWYEPGTQDPEDVAAAARMNDFHIGWYMHPLVYGDYPPVMRKNVGSRLPSFTAEESKRVLESYDFVGFNHYVAIFVRADLSKLDQSLRDYMGDAAVKYDLPFLKSNNEFPLG--LTSDFMTSTPWALKKMLNHLQEKYKNPIVMI 411          
The following BLAST results are available for this feature:
BLAST of CX288589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
BGL28_ORYSJ1.360e-2740.94Beta-glucosidase 28 OS=Oryza sativa subsp. japonic... [more]
BGL35_ORYSJ3.956e-2739.86Putative beta-glucosidase 35 OS=Oryza sativa subsp... [more]
BGL29_ORYSJ3.956e-2739.73Beta-glucosidase 29 OS=Oryza sativa subsp. japonic... [more]
BGL04_ORYSJ3.956e-2738.41Beta-glucosidase 4 OS=Oryza sativa subsp. japonica... [more]
BGL34_ARATH5.166e-2744.83Myrosinase 4 OS=Arabidopsis thaliana GN=TGG4 PE=1 ... [more]
BGL35_ARATH1.151e-2644.83Myrosinase 5 OS=Arabidopsis thaliana GN=TGG5 PE=1 ... [more]
BGL27_ORYSJ1.151e-2641.72Beta-glucosidase 27 OS=Oryza sativa subsp. japonic... [more]
BGL39_ARATH1.503e-2639.19Putative myrosinase 3 OS=Arabidopsis thaliana GN=T... [more]
BGL11_ARATH1.963e-2643.38Beta-glucosidase 11 OS=Arabidopsis thaliana GN=BGL... [more]
BGL31_ORYSJ6.315e-2539.87Beta-glucosidase 31 OS=Oryza sativa subsp. japonic... [more]

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Properties
Property NameValue
Genbank descriptionC02002B03SK IF1 Citrus clementina cDNA clone C02002B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288589 ID=CX288589; Name=CX288589; organism=Citrus clementina; type=EST; length=446bp
AGAATCGGAATTCTCTTGGATTTTGTTTGGTATGAACCTCTTACGAGATC
AAAGGCTGACAACTATGCAGCTCANAGAGCAAGAGACTTTCATGTTGGAT
GGTTTATTCATCCTATCGTTTATGGTGAGTACCCAAAAACAATGCAGAAC
ATTGTTGGCAACAGGCTACCCAAGTTCACAAAAGAAGAGGTTAAAATGGT
AAAGGGATCAATAGATTTTGTGGGTATTAACCAGTATACTGCCTACTACA
TGTATGATCCGCATTTGAAACAACCAAAGCAAGTGGGATATCANCAGGAT
TGGAATGCTGGATTTGCTTATGAAAAGAATGGAGTGCCAATTGGTCCAAG
AGCAAATTCTTATTGGCTATACAATGTACCTTGGGGAATGTACAAGGCCT
TAATGTACATAAAAGAGCATTATGGGAACCCTACAGTCATTCTGTC
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