CX288589

Overview
NameCX288589
Unique NameCX288589
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length446
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL42_ARATH (Beta-glucosidase 42 OS=Arabidopsis thaliana GN=BGLU42 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.077e-24
Identity = 56/149 (37.58%), Postives = 86/149 (57.72%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVK-MVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            +IG+ +D  W EP +    D  AA R  DF +GWF+ P+ +G+YP +M+  +G+ LP+FT EE + M++ S DF+G+N YT+  +     K+ +   Y           +NG  IG RA S WLY VPWG+ K L Y+ + Y +P + +
Sbjct:  238 QIGLSVDCEWAEPNSEKPEDKVAADRRIDFQLGWFLDPLFFGDYPASMRQKLGDNLPRFTPEEKEFMLQNSWDFLGLNHYTSRLISHVSNKEAESNFYQAQELERIVELENGDLIGERAASDWLYAVPWGIRKTLNYMSKKYNHPPIFI 386          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL47_ARATH (Beta-glucosidase 47 OS=Arabidopsis thaliana GN=BGLU47 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 1.837e-24
Identity = 59/149 (39.60%), Postives = 91/149 (61.07%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYE---KNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTV 438
            +IGI+++ +W+EP++ S AD  AA RA+ F++ WF+ P+V+G YP+ M+ I+G+ LP+FTK+++K  K ++DF+GINQYT+ Y  D  L    + G       GF Y    K+G+ +G           P GM + LMY  E Y N T+
Sbjct:  285 QIGIVMNTIWFEPISDSLADRLAADRAQAFYLTWFLDPVVFGRYPREMREILGDDLPEFTKDDLKSSKNALDFIGINQYTSRYAKD-CLHSVCEPGKGGSRAEGFVYANALKDGLRLGE----------PVGMEEMLMYATERYKNITL 422          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL45_ARATH (Beta-glucosidase 45 OS=Arabidopsis thaliana GN=BGLU45 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 9.119e-24
Identity = 58/146 (39.73%), Postives = 85/146 (58.22%), Query Frame = 1
Query:    4 IGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVK-MVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYE---KNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGN 429
            IGI++   W+EP++ S AD  AA RA+ F+  W + P++YG+YPK M +I+G  LP+F+  EVK + K   DFVGIN YT+Y++ D  L      G+      G+A +   K  V IG   +  W +  P G +K L Y+K+ Y N
Sbjct:  266 IGIVVQTSWFEPISDSNADKEAAERAQSFYSNWILDPVIYGKYPKEMVDILGPALPQFSSNEVKNLEKSRADFVGINHYTSYFIQD-CLTSACNTGHGAFKAEGYALKLDRKGNVTIGELTDVNWQHIDPTGFHKMLNYLKDRYPN 410          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL16_ARATH (Beta-glucosidase 16 OS=Arabidopsis thaliana GN=BGLU16 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 9.119e-24
Identity = 59/148 (39.86%), Postives = 83/148 (56.08%), Query Frame = 1
Query:    4 IGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYP-KTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            IGI L+  W+ P + S AD  AA RA  F   +F+ PIVYG YP + + ++   RLP FT EE +M+KGS DF+G+N Y++ Y  D      + +    D       E+NGVPIGP A S WL   P G+   L++ K  Y +P + +
Sbjct:  265 IGIALNTAWHYPYSDSYADRLAATRATAFTFDYFMEPIVYGRYPIEMVSHVKDGRLPTFTPEESEMLKGSYDFIGVNYYSSLYAKDVPC-ATENITMTTDSCVSLVGERNGVPIGPAAGSDWLLIYPKGIRDLLLHAKFRYNDPVLYI 411          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL14_ORYSJ (Probable inactive beta-glucosidase 14 OS=Oryza sativa subsp. japonica GN=BGLU14 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 1.556e-23
Identity = 56/149 (37.58%), Postives = 82/149 (55.03%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFT-KEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGN-PTVI 441
            +IGI L   WYEP   +  D  A  RA  F   WF+ PI+ G+YP  M+ ++G  LPKFT K++ ++    +DF+G+N YT  Y+ D      +      D      YE++GVPIG    + + ++VP GM +A+ Y K+ Y N PT I
Sbjct:  255 QIGIALSITWYEPFRNTTIDLLAVKRALSFGASWFLDPILLGDYPTEMREVLGQSLPKFTSKQKNRLQSTKLDFIGLNHYTTCYVKDCIFSPCEIDPVNADARVFSLYERDGVPIGKATGAPFFHDVPRGMEEAVTYYKQRYNNTPTYI 403          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL16_ORYSJ (Beta-glucosidase 16 OS=Oryza sativa subsp. japonica GN=BGLU16 PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 2.653e-23
Identity = 58/148 (39.19%), Postives = 82/148 (55.41%), Query Frame = 1
Query:    4 IGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGS-IDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            IGI++   WYEPLT S  D  AA RA  F V WF+ PI +G+YP+ M+ I+ + LPKFT EE K+++ + +DF+GIN YTA Y  D          Y  +        +NG  IG     +  + VP  M K +MY+ + Y N T+ +
Sbjct:  261 IGIVIAVKWYEPLTNSTEDVRAARRALAFEVDWFLDPIFFGDYPREMREILSSNLPKFTPEEKKLLQNNKVDFIGINHYTAIYAKDCIYSPCTLDTYEGNALVYAIGRRNGKIIGKPTALHGYFVVPEAMEKVVMYVNDRYRNTTIYI 408          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL15_ARATH (Beta-glucosidase 15 OS=Arabidopsis thaliana GN=BGLU15 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.653e-23
Identity = 60/148 (40.54%), Postives = 83/148 (56.08%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            ++GI L+  W  P T S  D  AA RA  F   +F+ P+V G+YP  M N V  RLP FT ++ KM+KGS DF+GIN Y++ Y  D      K V    D  A    E++GVPIGP+A S WL   P G+   ++Y K  + +P + +
Sbjct:  265 QVGIALNAGWNLPYTESPKDRLAAARAMAFTFDYFMEPLVTGKYPVDMVNNVKGRLPIFTAQQSKMLKGSYDFIGINYYSSTYAKDVPC-STKDVTMFSDPCASVTGERDGVPIGPKAASDWLLIYPKGIRDLVLYAKYKFKDPVMYI 411          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL31_ARATH (Beta-glucosidase 31 OS=Arabidopsis thaliana GN=BGLU31 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 3.465e-23
Identity = 60/159 (37.74%), Postives = 87/159 (54.72%), Query Frame = 1
Query:    1 RIGILLDFVWYEPL-TRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYD--------PHLKQPKQVGYXQDWNAG--FAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            +IGI+L   W+EP  + S AD  A  RA  F++GW + P+V+G+YP+T++   GNRLP FTKE+  MVK S DF+G+N YTA ++          P     + + Y      G   + E +G  I        L++ P G+ K L YIK  Y NPT+ +
Sbjct:  265 KIGIVLSPYWFEPYDSASNADKEAVERALAFNIGWHLSPLVFGDYPETIKISAGNRLPSFTKEQSMMVKNSFDFIGVNYYTARFVAHDLNVDISRPRFMTDQHLQYKLTNRTGDTISLESDGTKI--------LWSYPEGLRKILNYIKNKYNNPTIYI 415          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL32_ORYSJ (Beta-glucosidase 32 OS=Oryza sativa subsp. japonica GN=BGLU32 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 7.720e-23
Identity = 55/148 (37.16%), Postives = 86/148 (58.11%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            +IGI L   WYEP T + AD  AA R  +FH+GWF++P+V+G+YP  M++ VG RLP  T  + + ++GS DF+GIN Y   ++        +++   +D+      ++NG   G     Y L+  PW + K L ++K  YGNP V++
Sbjct:  261 QIGITLLGWWYEPYTDAVADAAAAIRMNEFHIGWFMNPLVHGDYPPVMRSRVGARLPSITASDSEKIRGSFDFIGINHYFVIFVQSSDANHDQKL---RDYYVDAGVQENGGG-GFDKEHYQLH--PWALGKMLHHLKLKYGNPPVMI 402          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL26_ARATH (Beta-glucosidase 26, peroxisomal OS=Arabidopsis thaliana GN=BGLU26 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 7.720e-23
Identity = 55/150 (36.67%), Postives = 82/150 (54.67%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNY-AAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEK-NGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            +IGI  + +WYEP   S  D+     RA DF +GW  HP   G+YP+TM+  VG+RLP FT E+ K + GS D+VGIN Y++ ++       P Q  +  D    +     +G  I  +  S W +  P G+   L Y+K+ YGNP +++
Sbjct:  247 QIGIAHNPLWYEPYDPSDPDDVEGCNRAMDFMLGWHQHPTACGDYPETMKKSVGDRLPSFTPEQSKKLIGSCDYVGINYYSSLFVKSIKHVDPTQPTWRTDQGVDWMKTNIDGKQIAKQGGSEWSFTYPTGLRNILKYVKKTYGNPPILI 396          
The following BLAST results are available for this feature:
BLAST of CX288589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
BGL42_ARATH1.077e-2437.58Beta-glucosidase 42 OS=Arabidopsis thaliana GN=BGL... [more]
BGL47_ARATH1.837e-2439.60Beta-glucosidase 47 OS=Arabidopsis thaliana GN=BGL... [more]
BGL45_ARATH9.119e-2439.73Beta-glucosidase 45 OS=Arabidopsis thaliana GN=BGL... [more]
BGL16_ARATH9.119e-2439.86Beta-glucosidase 16 OS=Arabidopsis thaliana GN=BGL... [more]
BGL14_ORYSJ1.556e-2337.58Probable inactive beta-glucosidase 14 OS=Oryza sat... [more]
BGL16_ORYSJ2.653e-2339.19Beta-glucosidase 16 OS=Oryza sativa subsp. japonic... [more]
BGL15_ARATH2.653e-2340.54Beta-glucosidase 15 OS=Arabidopsis thaliana GN=BGL... [more]
BGL31_ARATH3.465e-2337.74Beta-glucosidase 31 OS=Arabidopsis thaliana GN=BGL... [more]
BGL32_ORYSJ7.720e-2337.16Beta-glucosidase 32 OS=Oryza sativa subsp. japonic... [more]
BGL26_ARATH7.720e-2336.67Beta-glucosidase 26, peroxisomal OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionC02002B03SK IF1 Citrus clementina cDNA clone C02002B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288589 ID=CX288589; Name=CX288589; organism=Citrus clementina; type=EST; length=446bp
AGAATCGGAATTCTCTTGGATTTTGTTTGGTATGAACCTCTTACGAGATC
AAAGGCTGACAACTATGCAGCTCANAGAGCAAGAGACTTTCATGTTGGAT
GGTTTATTCATCCTATCGTTTATGGTGAGTACCCAAAAACAATGCAGAAC
ATTGTTGGCAACAGGCTACCCAAGTTCACAAAAGAAGAGGTTAAAATGGT
AAAGGGATCAATAGATTTTGTGGGTATTAACCAGTATACTGCCTACTACA
TGTATGATCCGCATTTGAAACAACCAAAGCAAGTGGGATATCANCAGGAT
TGGAATGCTGGATTTGCTTATGAAAAGAATGGAGTGCCAATTGGTCCAAG
AGCAAATTCTTATTGGCTATACAATGTACCTTGGGGAATGTACAAGGCCT
TAATGTACATAAAAGAGCATTATGGGAACCCTACAGTCATTCTGTC
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