CX288589

Overview
NameCX288589
Unique NameCX288589
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length446
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5799 contig Ccv1_Contig5799:884..1329. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL30_ARATH (Beta-glucosidase 30 OS=Arabidopsis thaliana GN=BGLU30 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.008e-22
Identity = 59/151 (39.07%), Postives = 90/151 (59.60%), Query Frame = 1
Query:    1 RIGILLDFVWYEPL-TRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTA-YYMYDPHLKQPKQVGYXQDWNAGFAY-EKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            +IGI+L   W+EP  + S  D  AA RA  F +GW + P+++G+YP+ ++   GN+LP FT E+ KM++ S DFVGIN YTA +  + PH+  P++  +  D +  +     +G  IGP     +L++ P G+ K L YIKE Y N  V +
Sbjct:  259 QIGIVLSPRWFEPYHSDSTDDKEAAERALAFEIGWHLDPVIHGDYPEIVKKYAGNKLPSFTVEQSKMLQNSSDFVGINYYTARFAAHLPHI-DPEKPRFKTDHHVEWKLTNHSGHIIGPGEERGFLFSHPEGLRKVLNYIKERYNNMPVYI 408          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL28_ARATH (Beta-glucosidase 28 OS=Arabidopsis thaliana GN=BGLU28 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.008e-22
Identity = 57/150 (38.00%), Postives = 84/150 (56.00%), Query Frame = 1
Query:    1 RIGILLDFVWYEPL-TRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGF-AYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            +IGI+L  +W+EP  + S ADN A  RA    + W + P+++G+YP+ M+ + GNRLP FT E+ KM+K S DF+GIN YTA Y+       P +  +  D    +     +    GP  +   L + P G+ K L YIK+ Y NP V +
Sbjct:  261 QIGIVLSPLWFEPYDSASPADNEAVKRALATELDWHLDPVIHGDYPEMMKKLAGNRLPSFTPEQSKMLKNSSDFIGINYYTARYVAHIPQADPARPRFVTDHQLQWRVTNHSNHQFGPGEDRGILQSHPEGLRKVLNYIKDKYNNPIVYI 410          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL32_ARATH (Beta-glucosidase 32 OS=Arabidopsis thaliana GN=BGLU32 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 1.317e-22
Identity = 59/154 (38.31%), Postives = 95/154 (61.69%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLT-RSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYM-YDPH--LKQPKQVGYXQDWNAGFAY-EKNGVPIGPRAN-SYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            +IGI+L   W+EP    S++D  A  RA  F++GW + P+V+G+YP+T++   GNRLP FTKE+  M++ S DF+GIN YTA ++ +D H  L +P+   +  D +  +    ++G  I   ++ +  L++ P G+ K L YIK  Y NPT+ +
Sbjct:  265 KIGIVLSPYWFEPYDIDSESDKEAVERALVFNIGWHLSPLVFGDYPETIKTTAGNRLPSFTKEQSMMLQNSFDFIGINYYTARFVAHDLHVDLSRPR---FTTDQHLQYKLTNRSGDHISSESDGTKILWSYPEGLRKLLNYIKNKYNNPTIYI 415          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL18_ORYSJ (Beta-glucosidase 18 OS=Oryza sativa subsp. japonica GN=BGLU18 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 2.246e-22
Identity = 54/142 (38.03%), Postives = 72/142 (50.70%), Query Frame = 1
Query:    4 IGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGN 429
            IG++L   WYEPL     D  A  RA  F   WF+ P+VYG+YP  M+ I+G RLP F+ E+ + ++  +DF+G+N YT  Y  D       Q    Q   A    E NG+PIG        Y VP G+ K + Y    Y N
Sbjct:  260 IGMVLYSTWYEPLRDVPEDRLATERALAFETPWFLDPLVYGDYPPEMRQILGGRLPSFSPEDRRKLRYKLDFIGVNHYTTLYARDCMFSDCPQGQETQHALAAVTGESNGLPIGTPTAMPTFYVVPDGIEKMVKYFMRRYNN 401          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL13_ARATH (Beta-glucosidase 13 OS=Arabidopsis thaliana GN=BGLU13 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.934e-22
Identity = 59/149 (39.60%), Postives = 82/149 (55.03%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTM-QNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            ++GI L+  W  P T S  D  AA RA  F   +F+ P+V G+YP  M  N+   RLP FT ++ KM+KGS DF+GIN Y++ Y  D      + V    D  A    E+ GVPIGP+A S WL   P G+   L+Y K  + +P + +
Sbjct:  265 QVGIALNAGWNLPYTESAEDRLAAARAMAFTFDYFMEPLVTGKYPVDMVNNVKDGRLPTFTAKQSKMLKGSYDFIGINYYSSSYAKDVPCSS-ENVTLFSDPCASVTGEREGVPIGPKAASDWLLIYPKGIRDLLLYAKYKFKDPVMYI 412          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL09_ARATH (Beta-glucosidase 9 OS=Arabidopsis thaliana GN=BGLU9 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 2.934e-22
Identity = 60/149 (40.27%), Postives = 82/149 (55.03%), Query Frame = 1
Query:    4 IGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLY--NVPWGMYKALMYIKEHYGNPTVIL 444
            IG+ +      P T SK D  A  RA+ F  GW + P+V+G+YP  M+  VG+RLP F++EE + VKGS DF+GI  YT +Y+ +    QP           GF ++  GV I P  NS +L     PWG+   L YIK+ Y NP V +
Sbjct:  251 IGLSIFAFGLSPYTNSKDDEIATQRAKTFLYGWMLKPLVFGDYPDEMKKTVGSRLPVFSEEESEQVKGSSDFIGIIHYTTFYVTN---HQP-SASLFPSMGEGF-FKDMGVYIIPTGNSSFLVWEATPWGLEGILEYIKQSYNNPPVYI 394          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL33_ORYSJ (Probable inactive beta-glucosidase 33 OS=Oryza sativa subsp. japonica GN=BGLU33 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 5.004e-22
Identity = 55/148 (37.16%), Postives = 80/148 (54.05%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            +IGI L   W+EP T   AD  AA R  +FH+GWF+HP+V+G+YP  M++ VG RLP  T  + + ++GS DF+GIN Y   ++      + K   Y  D  AG   E +   I   +         W + K L ++K  YGNP V++
Sbjct:  261 QIGITLMVRWHEPYTDKTADAAAAIRMNEFHIGWFLHPLVHGDYPPVMRSRVGVRLPSITASDSEKIRGSFDFIGINHYYVIFVQSIDANEQKLRDYYID--AGVQGEDDTENIQCHS---------WSLGKVLNHLKLEYGNPPVMI 397          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGLS_TRIRP (Non-cyanogenic beta-glucosidase OS=Trifolium repens PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.115e-21
Identity = 56/142 (39.44%), Postives = 82/142 (57.75%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLT-RSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHY 423
            +IGI L   W  PL   S  D  AA R+ DF  G F+  +  G+Y K+M+ IV NRLPKF+K E  +V GS DF+GIN Y++ Y+ +       +  Y  +     ++EK+G+P+GPRA S W+Y  P+      M+I+E +
Sbjct:  267 KIGITLVSNWLMPLDDNSIPDIKAAERSLDFQFGLFMEQLTTGDYSKSMRRIVKNRLPKFSKFESSLVNGSFDFIGINYYSSSYISNAPSHGNAKPSYSTNPMTNISFEKHGIPLGPRAASIWIYVYPY------MFIQEDF 402          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL12_ARATH (Beta-glucosidase 12 OS=Arabidopsis thaliana GN=BGLU12 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.115e-21
Identity = 59/149 (39.60%), Postives = 82/149 (55.03%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIV-GNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            ++GI L+  W  P + S  D  AA RA  F   +F+ P+V G+YP  M N V G RLP FT ++ KM+KGS DF+G N Y++ Y  D      + V    D  A    E+ GVPIGP+A S WL   P G+   L+Y K  + +P + +
Sbjct:  265 QVGIALNAGWNLPYSESAEDRLAAARAMAFTFDYFMEPLVTGKYPIDMVNYVKGGRLPTFTAKQSKMLKGSYDFIGRNYYSSSYAKDVPCSS-ENVTLFSDPCASVTGEREGVPIGPKAASDWLLIYPKGIRDLLLYAKYKFKDPVMYI 412          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL04_ARATH (Beta-glucosidase 4 OS=Arabidopsis thaliana GN=BGLU4 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 1.902e-21
Identity = 55/147 (37.41%), Postives = 84/147 (57.14%), Query Frame = 1
Query:    4 IGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            IG  L  +   P T SK D  A  RA+DF+VGWF+ P+++G+YP TM+  +G+RLP F+++E + VKGS DFVG+  Y A  +   ++K    +    D+   ++Y +       ++  +   N PW M   L YIK+ YGNP V +
Sbjct:  251 IGFSLFILGLIPTTSSKDDATATQRAQDFYVGWFLRPLLFGDYPDTMKRTIGSRLPVFSEKESEQVKGSCDFVGVIHYHAASV--TNIKSKPSLSGNPDF---YSYMETDF---GKSLDFQYANTPWAMEVVLEYIKQSYGNPPVYI 389          
The following BLAST results are available for this feature:
BLAST of CX288589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
BGL30_ARATH1.008e-2239.07Beta-glucosidase 30 OS=Arabidopsis thaliana GN=BGL... [more]
BGL28_ARATH1.008e-2238.00Beta-glucosidase 28 OS=Arabidopsis thaliana GN=BGL... [more]
BGL32_ARATH1.317e-2238.31Beta-glucosidase 32 OS=Arabidopsis thaliana GN=BGL... [more]
BGL18_ORYSJ2.246e-2238.03Beta-glucosidase 18 OS=Oryza sativa subsp. japonic... [more]
BGL13_ARATH2.934e-2239.60Beta-glucosidase 13 OS=Arabidopsis thaliana GN=BGL... [more]
BGL09_ARATH2.934e-2240.27Beta-glucosidase 9 OS=Arabidopsis thaliana GN=BGLU... [more]
BGL33_ORYSJ5.004e-2237.16Probable inactive beta-glucosidase 33 OS=Oryza sat... [more]
BGLS_TRIRP1.115e-2139.44Non-cyanogenic beta-glucosidase OS=Trifolium repen... [more]
BGL12_ARATH1.115e-2139.60Beta-glucosidase 12 OS=Arabidopsis thaliana GN=BGL... [more]
BGL04_ARATH1.902e-2137.41Beta-glucosidase 4 OS=Arabidopsis thaliana GN=BGLU... [more]

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Properties
Property NameValue
Genbank descriptionC02002B03SK IF1 Citrus clementina cDNA clone C02002B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288589 ID=CX288589; Name=CX288589; organism=Citrus clementina; type=EST; length=446bp
AGAATCGGAATTCTCTTGGATTTTGTTTGGTATGAACCTCTTACGAGATC
AAAGGCTGACAACTATGCAGCTCANAGAGCAAGAGACTTTCATGTTGGAT
GGTTTATTCATCCTATCGTTTATGGTGAGTACCCAAAAACAATGCAGAAC
ATTGTTGGCAACAGGCTACCCAAGTTCACAAAAGAAGAGGTTAAAATGGT
AAAGGGATCAATAGATTTTGTGGGTATTAACCAGTATACTGCCTACTACA
TGTATGATCCGCATTTGAAACAACCAAAGCAAGTGGGATATCANCAGGAT
TGGAATGCTGGATTTGCTTATGAAAAGAATGGAGTGCCAATTGGTCCAAG
AGCAAATTCTTATTGGCTATACAATGTACCTTGGGGAATGTACAAGGCCT
TAATGTACATAAAAGAGCATTATGGGAACCCTACAGTCATTCTGTC
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