CX288589

Overview
NameCX288589
Unique NameCX288589
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length446
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL22_ORYSJ (Beta-glucosidase 22 OS=Oryza sativa subsp. japonica GN=BGLU22 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 2.102e-20
Identity = 56/150 (37.33%), Postives = 83/150 (55.33%), Query Frame = 1
Query:    4 IGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVG---YXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHY-GNPTVI 441
            +G+ +   W  P + S AD  A  RA DF VGW + P+VYG+YP+ M+   G+R+P FT+E+ ++++GS DF+GIN YT+ Y+ D      + VG   Y  D  A F   +N  P G    +  L   P G+   L Y+++ Y G P  I
Sbjct:  273 VGMNIYSFWNYPFSSSSADIAATQRALDFMVGWILDPLVYGDYPEIMKKKAGSRIPSFTEEQSELIRGSADFIGINHYTSVYISD--ASNGETVGPRDYSADMAATFRISRNDTPSGQFVPTR-LPRDPKGLQCMLEYLRDTYQGIPVYI 419          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL19_ORYSJ (Beta-glucosidase 19 OS=Oryza sativa subsp. japonica GN=BGLU19 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 2.102e-20
Identity = 54/144 (37.50%), Postives = 81/144 (56.25%), Query Frame = 1
Query:    4 IGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPH--LKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGN 429
            +G+ +  +W+ PLT S  D  A  R +DF  GW +HP+V+G+YP+TM+   G+RLP F+  E ++V  + DF+G+N YT+ Y+ D    +K P Q     D ++ F   KN  P         L   P G+  AL Y++E YGN
Sbjct:  276 VGMNIYSMWFYPLTESTEDIAATERVKDFMYGWILHPLVFGDYPETMKKAAGSRLPLFSDYESELVTNAFDFIGLNHYTSNYVSDNSNAVKAPLQ-DVTDDISSLFWASKNSTPTREFLPGTSL--DPRGLELALEYLQEKYGN 416          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL03_ORYSJ (Beta-glucosidase 3 OS=Oryza sativa subsp. japonica GN=BGLU3 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 3.586e-20
Identity = 52/148 (35.14%), Postives = 85/148 (57.43%), Query Frame = 1
Query:    4 IGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWL------YNVPWGMYKALMYIKEHYGN 429
            +GI +  +W  PLT S AD  AA R +DF  GW +HP+V+G+YP+ M+  +G+RLP F+K + ++VKG++DF+G+N Y + Y+ D  L +       +D+ A  +    G+  G R  +  +         P G+   L ++KE YG+
Sbjct:  256 VGINVLSLWSYPLTDSTADLQAAQRYKDFTYGWILHPLVFGDYPQVMKKAIGSRLPSFSKVQTELVKGTLDFIGVNHYFSLYVSDLPLAKG-----VRDFIADRSVSCRGLLQGVRFIAQTMQAPTRSMGDPHGLQLMLQHLKESYGD 398          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL25_ARATH (Probable inactive beta-glucosidase 25 OS=Arabidopsis thaliana GN=BGLU25 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 4.684e-20
Identity = 52/152 (34.21%), Postives = 85/152 (55.92%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTR---SKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGF-AYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            +IGI+   +W+EP  +   S        RA DF +GW + PI +G+YP+ M+++VG+RLP FT E+ + +KGS DFVGIN +T+ ++       P++  +  D      +   +G  IG +  +        G+ K L YIKE+Y +P +I+
Sbjct:  267 KIGIVQSPMWFEPYDKKSTSSPSEEIVKRAMDFTLGWHMEPITHGDYPQAMKDVVGSRLPSFTPEQKEKLKGSYDFVGINYFTSTFVAHTDNVNPEKPSWEADSRLQLHSNNVDGFKIGSQPATAKYPVCADGLRKVLKYIKENYNDPEIIV 418          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL29_ARATH (Beta-glucosidase 29 OS=Arabidopsis thaliana GN=BGLU29 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 2.324e-19
Identity = 50/148 (33.78%), Postives = 81/148 (54.73%), Query Frame = 1
Query:    1 RIGILLDFVWYEPL-TRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYY-MYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTV 438
            +IGI++   W EP  + S AD  A  R     + W ++P++YG+YP+TM+  VGNRLP FT E+ KM+  S DF+G+N Y+ ++  + PH+   +               ++    GP  +   +++ P G+ + L YIK+ Y NP V
Sbjct:  262 KIGIVISPWWLEPYDSTSSADKEAVERGLPLELEWHLNPVIYGDYPETMKKHVGNRLPAFTPEQSKMLINSSDFIGVNYYSIHFTAHLPHIDHTRPRFRTDHHFEKKLINRSNHETGPGDDRGKIHSHPEGLRRVLNYIKDKYNNPIV 409          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL02_ARATH (Putative beta-glucosidase 2 OS=Arabidopsis thaliana GN=BGLU2 PE=5 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 3.036e-19
Identity = 55/147 (37.41%), Postives = 74/147 (50.34%), Query Frame = 1
Query:   13 LLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQ--PKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNV-PWGMYKALMYIKEHYGNPTVIL 444
            L  F +    + SK D  A  RA+DF  GW + P+ +G+YP  M+  VG+RLP F+KEE + VKGS DF+GI  Y    + +  LK    +   +  D      Y  N    G        Y+V PW M   L YIK+ YGNP V +
Sbjct:  115 LYAFEFIPQTSSSKDDEIAIQRAKDFFYGWILGPLTFGDYPDEMKRAVGSRLPIFSKEESEQVKGSSDFIGIMHYFPALVENIKLKPSLSRNTDFYSDMGVSLTYLGNFSGFG--------YDVFPWAMESVLEYIKQTYGNPPVYI 253          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL18_ARATH (Beta-glucosidase 18 OS=Arabidopsis thaliana GN=BGLU18 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 5.178e-19
Identity = 55/151 (36.42%), Postives = 84/151 (55.63%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYD--PHLKQPK-QVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            +IGI     W+EP         +  R  DF +GW + P  YG+YP++M++ VG+RLPKFT+ E K++KGS D+VG+N YT+ +  +  P  K P        DW+   +   +G  IG +  +  L     G+   L YIK++YG+P VI+
Sbjct:  274 KIGIAHSPAWFEPQDLEHVGG-SIERVLDFILGWHLAPTTYGDYPQSMKDRVGHRLPKFTEAEKKLLKGSTDYVGMNYYTSVFAKEISPDPKSPSWTTDSLVDWD---SKSVDGYKIGSKPFNGKLDVYSKGLRYLLKYIKDNYGDPEVII 420          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGLC_MAIZE (Beta-glucosidase, chloroplastic OS=Zea mays GN=GLU1 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.154e-18
Identity = 50/154 (32.47%), Postives = 79/154 (51.30%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEK------NGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            RIG+  D +   P   S  D  A  R+ D ++GWF+ P+V G+YP +M+++   RLP F  E+ + + GS + +G+N YT+ +  +  +       Y    N   AY        +G PIGP   + W+Y  P G+   LM +K  YGNP + +
Sbjct:  309 RIGLAFDVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARERLPFFKDEQKEKLAGSYNMLGLNYYTSRFSKNIDISP----NYSPVLNTDDAYASQEVNGPDGKPIGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYI 458          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL21_ORYSJ (Beta-glucosidase 21 OS=Oryza sativa subsp. japonica GN=BGLU21 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 1.154e-18
Identity = 54/144 (37.50%), Postives = 77/144 (53.47%), Query Frame = 1
Query:    4 IGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPH--LKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGN 429
            IGI +  +W+ P T S  +  A  RA+ F  GW +HP+V+G+YP TM+   G+RLP F+  E +MV  S DF+G+N Y++ Y  + +  +K P Q     D    F   KN  P         +   P G+  AL YI+E YGN
Sbjct:  259 IGINIYSMWFYPFTDSAEEIGATERAKKFIYGWILHPLVFGDYPDTMKKAAGSRLPIFSNHESEMVTNSFDFIGLNHYSSVYTSNNNNVVKAPLQ-DLTADVATLFRVTKNDTPTPVFVPGTIV--DPRGLEHALKYIREKYGN 399          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL20_ARATH (Beta-glucosidase 20 OS=Arabidopsis thaliana GN=BGLU20 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.968e-18
Identity = 50/153 (32.68%), Postives = 78/153 (50.98%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNYAAXRAR-DFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQ----DWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            +IGI     W+E    S  ++        DF +GW +HP  YG+YP++M++ +G+RLPKFT+ + + +K S DFVGIN YT+ +        P Q  +      DW   +  + N     P      +Y    G+   L YIK+ YGNP +++
Sbjct:  272 KIGIAHSPAWFEAHELSDEEHETPVTGLIDFILGWHLHPTTYGDYPQSMKDHIGHRLPKFTEAQKEKLKNSADFVGINYYTSVFALHDEEPDPSQPSWQSDSLVDWEPRYVDKFNAFANKPDVAKVEVY--AKGLRSLLKYIKDKYGNPEIMI 422          
The following BLAST results are available for this feature:
BLAST of CX288589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
BGL22_ORYSJ2.102e-2037.33Beta-glucosidase 22 OS=Oryza sativa subsp. japonic... [more]
BGL19_ORYSJ2.102e-2037.50Beta-glucosidase 19 OS=Oryza sativa subsp. japonic... [more]
BGL03_ORYSJ3.586e-2035.14Beta-glucosidase 3 OS=Oryza sativa subsp. japonica... [more]
BGL25_ARATH4.684e-2034.21Probable inactive beta-glucosidase 25 OS=Arabidops... [more]
BGL29_ARATH2.324e-1933.78Beta-glucosidase 29 OS=Arabidopsis thaliana GN=BGL... [more]
BGL02_ARATH3.036e-1937.41Putative beta-glucosidase 2 OS=Arabidopsis thalian... [more]
BGL18_ARATH5.178e-1936.42Beta-glucosidase 18 OS=Arabidopsis thaliana GN=BGL... [more]
BGLC_MAIZE1.154e-1832.47Beta-glucosidase, chloroplastic OS=Zea mays GN=GLU... [more]
BGL21_ORYSJ1.154e-1837.50Beta-glucosidase 21 OS=Oryza sativa subsp. japonic... [more]
BGL20_ARATH1.968e-1832.68Beta-glucosidase 20 OS=Arabidopsis thaliana GN=BGL... [more]

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Properties
Property NameValue
Genbank descriptionC02002B03SK IF1 Citrus clementina cDNA clone C02002B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288589 ID=CX288589; Name=CX288589; organism=Citrus clementina; type=EST; length=446bp
AGAATCGGAATTCTCTTGGATTTTGTTTGGTATGAACCTCTTACGAGATC
AAAGGCTGACAACTATGCAGCTCANAGAGCAAGAGACTTTCATGTTGGAT
GGTTTATTCATCCTATCGTTTATGGTGAGTACCCAAAAACAATGCAGAAC
ATTGTTGGCAACAGGCTACCCAAGTTCACAAAAGAAGAGGTTAAAATGGT
AAAGGGATCAATAGATTTTGTGGGTATTAACCAGTATACTGCCTACTACA
TGTATGATCCGCATTTGAAACAACCAAAGCAAGTGGGATATCANCAGGAT
TGGAATGCTGGATTTGCTTATGAAAAGAATGGAGTGCCAATTGGTCCAAG
AGCAAATTCTTATTGGCTATACAATGTACCTTGGGGAATGTACAAGGCCT
TAATGTACATAAAAGAGCATTATGGGAACCCTACAGTCATTCTGTC
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