CX288589

Overview
NameCX288589
Unique NameCX288589
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length446
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: HIUH_SOYBN (Hydroxyisourate hydrolase OS=Glycine max GN=HIUH PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 3.356e-18
Identity = 53/147 (36.05%), Postives = 77/147 (52.38%), Query Frame = 1
Query:    4 IGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            +GI +      P T ++ D  A+ RARDF VGW + P+ YG+YP +M+   G R+P FT  E K VKGS DF+G+  YT   + D       Q+   +D+ A  A    G  +   +N  +L   PWG+ + L   K  YGNP + +
Sbjct:  266 VGISIYTFGIFPQTNTEKDRVASQRARDFFVGWIMEPLQYGDYPISMKTNAGERIPAFTNHESKQVKGSFDFIGVIHYTNLNVSDNSDALKNQL---RDFTADMAANIFGEDL--FSNEEYLI-TPWGLRQELNKFKLLYGNPPIFI 406          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL23_ORYSJ (Putative beta-glucosidase 23 OS=Oryza sativa subsp. japonica GN=BGLU23 PE=5 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 3.356e-18
Identity = 43/110 (39.09%), Postives = 67/110 (60.91%), Query Frame = 1
Query:    4 IGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNG 333
            +G  +   W  PL+RS AD  A  R  DF +GW + P+VYG+YP+ M+   G+R+P FTKE+ ++++GS DF+GIN Y + Y+ D   ++   +   +D+NA  A    G
Sbjct:  328 VGTNIYSFWPYPLSRSCADIDAVQRVLDFTIGWILDPLVYGDYPEIMKKQAGSRIPSFTKEQSELIRGSADFIGINHYKSLYVSDGSNREKAGL---RDYNADMAAHFRG 434          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL1A_PHACH (Beta-glucosidase 1A OS=Phanerochaete chrysosporium GN=BGL1A PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 4.384e-18
Identity = 53/151 (35.10%), Postives = 77/151 (50.99%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFA----YEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVI 441
            +IGI LD  W  P   + A   A  RA +F +G F +PI  GEYP  ++ I+G+RLP+FT EE+++VKGS DF G+N YT + + D             D  AGF        +G  +G +++  WL     G    L Y+ + Y  P  +
Sbjct:  223 QIGITLDSHWLIPYDDTDASKEATLRAMEFKLGRFANPIYKGEYPPRIKKILGDRLPEFTPEEIELVKGSSDFFGLNTYTTHLVQDG----------GSDELAGFVKTGHTRADGTQLGTQSDMGWLQTYGPGFRWLLNYLWKAYDKPVYV 363          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL07_ARATH (Beta-glucosidase 7 OS=Arabidopsis thaliana GN=BGLU7 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 7.477e-18
Identity = 52/150 (34.67%), Postives = 75/150 (50.00%), Query Frame = 1
Query:    4 IGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYD---PHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            +G+ +      P T SK D  A  RA  F  GW + P+V G+YP  M+  +G+RLP F++EE K VKGS DFVG+  Y  +Y+ +   P L       +  D  A      N       A+ +    VPWG+   L +IK+ Y NP + +
Sbjct:  248 VGLSIYAYGLSPYTDSKDDETATERAEAFLFGWMLKPLVVGDYPDIMKRTLGSRLPVFSEEESKQVKGSSDFVGVVHYNTFYVTNRPAPSLVTSINKLFFADIGAYLIAAGN-------ASLFEFDAVPWGLEGILQHIKQSYNNPPIYI 390          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL01_ARATH (Beta-glucosidase 1 OS=Arabidopsis thaliana GN=BGLU1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 9.766e-18
Identity = 49/147 (33.33%), Postives = 72/147 (48.98%), Query Frame = 1
Query:    4 IGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            +G  L  + + P T SK D  A  RA DF++GW + P++YG+YP  M+  +G+RLP F+KEE + VKGS DF+G+  Y    +                           + I P  +    +N   G+   L YIK+ YGNP V +
Sbjct:  256 VGFSLFAMNFTPSTNSKDDEIATKRANDFYLGWMLEPLIYGDYPDVMKRTIGSRLPVFSKEESEQVKGSSDFIGVIHYLTALV-------------------------TNIDINPSLSGIPDFNSDMGI---LEYIKQSYGNPPVYI 374          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: LCTL_HUMAN (Lactase-like protein OS=Homo sapiens GN=LCTL PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 1.275e-17
Identity = 50/156 (32.05%), Postives = 81/156 (51.92%), Query Frame = 1
Query:    4 IGILLDFVWYEPLTRSKA-DNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVG----------NRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTV 438
            +GI L+  W EP+  S   D  AA R   F +GWF +PI  G+YP+ M++ +G          +RLP F+ +E   +KG+ DF+G+  +T  Y+ + +    +   Y  D +     + N   +G    S WLY+VPWG  + L + +  YG+P +
Sbjct:  256 VGISLNCDWGEPVDISNPKDLEAAERYLQFCLGWFANPIYAGDYPQVMKDYIGRKSAEQGLEMSRLPVFSLQEKSYIKGTSDFLGLGHFTTRYITERNYPSRQGPSYQNDRDLIELVDPNWPDLG----SKWLYSVPWGFRRLLNFAQTQYGDPPI 407          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL06_ARATH (Putative beta-glucosidase 6 OS=Arabidopsis thaliana GN=BGLU6 PE=5 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.666e-17
Identity = 41/89 (46.07%), Postives = 58/89 (65.17%), Query Frame = 1
Query:    4 IGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLK 270
            IG  +  + + P T SK D  A  RA DF  GW + P++YG+YP TM+ IVG+R+P F++EE + VKGS D++GIN Y A  + +  LK
Sbjct:  252 IGFSILTIGFSPSTSSKDDAIATQRANDFFNGWMLGPLIYGDYPDTMKRIVGSRMPVFSEEESEQVKGSSDYIGINHYLAASITNSKLK 340          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL19_ARATH (Beta-glucosidase 19 OS=Arabidopsis thaliana GN=BGLU19 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.176e-17
Identity = 47/150 (31.33%), Postives = 78/150 (52.00%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYE--KNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            +IGI     W+EP    +       R  DF +GW + P  +G+YP++M++ VG+RLP+FTK +   +K S DFVGIN YT+++         +   +  D    F  +     + IG + N+  +     G+ K + YIK+ Y +P +I+
Sbjct:  268 KIGIAHSPAWFEP-EDVEGGQATVNRVLDFVIGWHLDPTTFGDYPQSMKDAVGSRLPRFTKAQKAKLKDSTDFVGINYYTSFFAKADQKVDSRNPTWATDALVEFEPKTVDGSIKIGSQPNTAKMAVYAKGLRKLMKYIKDRYNSPEIII 416          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: LCTL_MOUSE (Lactase-like protein OS=Mus musculus GN=Lctl PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.847e-17
Identity = 49/156 (31.41%), Postives = 78/156 (50.00%), Query Frame = 1
Query:    4 IGILLDFVWYEPLTRSKADNY-AAXRARDFHVGWFIHPIVYGEYPKTMQNIVG----------NRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTV 438
            +GI L+  W EP+     D+  AA R   F +GWF +PI  G+YP+ M++ +G          +RLP F+ +E   +KG+ DF+G+  +T  Y+        +   Y  D +     + N     P   S WLY+VPWG  + L + +  YG+P +
Sbjct:  255 VGISLNCDWGEPVDIDNPDDIEAAERYLQFCLGWFANPIYAGDYPQVMKDHIGTKSAEQGLEMSRLPTFSLQEKSYLKGTSDFLGLGHFTTRYITQRKYPSHQGPSYQNDRDLVELVDPNW----PEMGSPWLYSVPWGFRRLLNFAQTQYGDPPI 406          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL38_ARATH (Myrosinase 1 OS=Arabidopsis thaliana GN=TGG1 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.847e-17
Identity = 51/147 (34.69%), Postives = 74/147 (50.34%), Query Frame = 1
Query:    4 IGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKN--GVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTV 438
            IG ++   W+ P   S+    A  RA+ F  GWF+ P+  G+YP  M+  VG+RLP+F++ E  +VKGS DF+G+N Y   Y  +     P  V      +      KN  G   GP  N+   Y  P G+Y  + Y K  YG+P +
Sbjct:  271 IGPVMITRWFLPFDHSQESKDATERAKIFFHGWFMGPLTEGKYPDIMREYVGDRLPEFSETEAALVKGSYDFLGLNYYVTQYAQNNQTIVPSDVHTALMDSRTTLTSKNATGHAPGPPFNAA-SYYYPKGIYYVMDYFKTTYGDPLI 416          
The following BLAST results are available for this feature:
BLAST of CX288589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
HIUH_SOYBN3.356e-1836.05Hydroxyisourate hydrolase OS=Glycine max GN=HIUH P... [more]
BGL23_ORYSJ3.356e-1839.09Putative beta-glucosidase 23 OS=Oryza sativa subsp... [more]
BGL1A_PHACH4.384e-1835.10Beta-glucosidase 1A OS=Phanerochaete chrysosporium... [more]
BGL07_ARATH7.477e-1834.67Beta-glucosidase 7 OS=Arabidopsis thaliana GN=BGLU... [more]
BGL01_ARATH9.766e-1833.33Beta-glucosidase 1 OS=Arabidopsis thaliana GN=BGLU... [more]
LCTL_HUMAN1.275e-1732.05Lactase-like protein OS=Homo sapiens GN=LCTL PE=1 ... [more]
BGL06_ARATH1.666e-1746.07Putative beta-glucosidase 6 OS=Arabidopsis thalian... [more]
BGL19_ARATH2.176e-1731.33Beta-glucosidase 19 OS=Arabidopsis thaliana GN=BGL... [more]
LCTL_MOUSE4.847e-1731.41Lactase-like protein OS=Mus musculus GN=Lctl PE=2 ... [more]
BGL38_ARATH4.847e-1734.69Myrosinase 1 OS=Arabidopsis thaliana GN=TGG1 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionC02002B03SK IF1 Citrus clementina cDNA clone C02002B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288589 ID=CX288589; Name=CX288589; organism=Citrus clementina; type=EST; length=446bp
AGAATCGGAATTCTCTTGGATTTTGTTTGGTATGAACCTCTTACGAGATC
AAAGGCTGACAACTATGCAGCTCANAGAGCAAGAGACTTTCATGTTGGAT
GGTTTATTCATCCTATCGTTTATGGTGAGTACCCAAAAACAATGCAGAAC
ATTGTTGGCAACAGGCTACCCAAGTTCACAAAAGAAGAGGTTAAAATGGT
AAAGGGATCAATAGATTTTGTGGGTATTAACCAGTATACTGCCTACTACA
TGTATGATCCGCATTTGAAACAACCAAAGCAAGTGGGATATCANCAGGAT
TGGAATGCTGGATTTGCTTATGAAAAGAATGGAGTGCCAATTGGTCCAAG
AGCAAATTCTTATTGGCTATACAATGTACCTTGGGGAATGTACAAGGCCT
TAATGTACATAAAAGAGCATTATGGGAACCCTACAGTCATTCTGTC
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