CX288589

Overview
NameCX288589
Unique NameCX288589
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length446
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5799 contig Ccv1_Contig5799:884..1329. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: MYR1_SINAL (Myrosinase MB1 (Fragment) OS=Sinapis alba PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 3.473e-15
Identity = 46/127 (36.22%), Postives = 63/127 (49.61%), Query Frame = 1
Query:   85 DFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAY-------EKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            +F  GW++ P+  G YP  M+ IVG+RLPKF K E K+V GS DF+G+N Y   Y        P +  +    +AG          E  G      ANSY+    P G+Y  + Y K  YGNP + +
Sbjct:    1 EFFHGWYMEPLTKGRYPAIMRKIVGSRLPKFNKTEAKLVTGSYDFLGLNYYVTQYAKPKPNPYPSET-HTAMMDAGVDLTFKNSRGEYPGPVFAEDANSYY---YPKGIYYVMDYFKTKYGNPLIYI 123          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL21_ARATH (Beta-glucosidase 21 OS=Arabidopsis thaliana GN=BGLU21 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 3.473e-15
Identity = 49/152 (32.24%), Postives = 76/152 (50.00%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLT-RSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGV---PIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            +IGI     W+EP   +   D     R  DF +GW + P   G+YP+ M++++G RLP+FT  +   +K S DFVG+N YT+ +        P +  + QD  +  ++E   V    IG    +  L     G  K L YIK+ Y NP +++
Sbjct:  267 KIGIAHSPAWFEPHDLKDSNDAPTVSRVLDFMLGWHLEPTTSGDYPQIMKDLLGYRLPQFTAAQKAKLKDSTDFVGLNYYTSTFSNYNEKPDPSKPSWKQD--SLVSWEPKNVDHSAIGSMPLTAALPVYAKGFRKLLKYIKDKYANPEIMI 416          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: MYR2_SINAL (Myrosinase MB2 (Fragment) OS=Sinapis alba PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 7.738e-15
Identity = 45/127 (35.43%), Postives = 63/127 (49.61%), Query Frame = 1
Query:   85 DFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAY-------EKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            +F  GW++ P+  G YP  M+ IVG RLP FT++E ++V GS DF+G+N Y   Y        P +     D +AG          E  G      ANSY+    P G+Y  + Y K  YGNP + +
Sbjct:    1 EFFHGWYMEPLTKGRYPDIMRQIVGTRLPNFTEDEAELVAGSYDFLGLNYYVTQYAKPKPNPYPSEKHTAMD-DAGVDLTFKNSRGEYPGPVFAEDANSYY---YPKGIYYVMDYFKTKYGNPLIYI 123          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: LPH_HUMAN (Lactase-phlorizin hydrolase OS=Homo sapiens GN=LCT PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 2.251e-14
Identity = 48/153 (31.37%), Postives = 83/153 (54.25%), Query Frame = 1
Query:    4 IGILLDFVWYEPLTRSKADNY-AAXRARDFHVGWFIHPI-VYGEYPKTMQNIVGN----------RLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQ-DWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHY 423
            +GI+L+  W EPL+  + ++  A+ R   F +GWF HP+ V G+YP T++  +            +LP+FT+ E +++KGS DF+G++ YT+  + +     P+       D   GF+   N V   P+ +S W+  VPWG+ + L ++   Y
Sbjct:  597 VGIVLNSDWAEPLSPERPEDLRASERFLHFMLGWFAHPVFVDGDYPATLRTQIQQMNRQCSHPVAQLPEFTEAEKQLLKGSADFLGLSHYTSRLISN----APQNTCIPSYDTIGGFSQHVNHV--WPQTSSSWIRVVPWGIRRLLQFVSLEY 743          

HSP 2 Score: 67.3958 bits (163), Expect = 3.043e-11
Identity = 45/157 (28.66%), Postives = 72/157 (45.86%), Query Frame = 1
Query:    4 IGILLDFVWYEPLTRSKADNY-AAXRARDFHVGWFIHPIVY-GEYPKTMQNIVGNR----------LPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTV 438
            I I +   W EP   S  ++  AA R   F  GWF HPI   G+Y + M+  + +R          LP+FT+ E + + G+ DF G N YT    Y+ +        +  D       +++     P + S+WL   P+G  + L ++KE Y +P +
Sbjct: 1594 ISITISSDWAEPRDPSNQEDVEAARRYVQFMGGWFAHPIFKNGDYNEVMKTRIRDRSLAAGLNKSRLPEFTESEKRRINGTYDFFGFNHYTTVLAYNLNYATAIS-SFDADRGVASIADRS----WPDSGSFWLKMTPFGFRRILNWLKEEYNDPPI 1745          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL14_ARATH (Beta-glucosidase 14 OS=Arabidopsis thaliana GN=BGLU14 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 2.251e-14
Identity = 39/87 (44.83%), Postives = 53/87 (60.92%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTM-QNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYD 258
            ++GI L+  W  P T S  D  AA RA  F   +F+ P+V G+YP  M  N+ G RLP FT ++  M+KGS DF+GIN Y++ Y  D
Sbjct:  264 QVGIALNAGWNLPYTESAEDRLAAARAMAFTFDYFMEPLVTGKYPVDMVNNVKGGRLPTFTSKQSNMLKGSYDFIGINYYSSSYAKD 350          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: GBA3_CAVPO (Cytosolic beta-glucosidase OS=Cavia porcellus GN=Gba3 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 6.551e-14
Identity = 49/159 (30.82%), Postives = 80/159 (50.31%), Query Frame = 1
Query:    4 IGILLDFVWYEPLT-RSKADNYAAXRARDFHVGWFIHPI-VYGEYPKTMQNIVGN----------RLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            + + L  +W +P    S  D  AA RA +F   +F  PI + G+YP+ +++ + +          RL KFT+EE KM+KG+ DF  +  YT  ++     K+  ++G  QD       + +   +G      W+  VPWG+ K L YIK+ Y NP + +
Sbjct:  220 VSLSLFCIWPQPENPNSVLDQKAAERAINFQFDFFAKPIFIDGDYPELVKSQIASMSEKQGYPSSRLSKFTEEEKKMIKGTADFFAVQYYTTRFIRHKENKE-AELGILQDAEIELFSDPSWKGVG------WVRVVPWGIRKLLNYIKDTYNNPVIYI 371          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL15_ORYSJ (Putative beta-glucosidase 15 OS=Oryza sativa subsp. japonica GN=BGLU15 PE=5 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 8.555e-14
Identity = 40/114 (35.09%), Postives = 60/114 (52.63%), Query Frame = 1
Query:  103 FIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            F+ PI +GEYP+ M+ I+ + LPKFT EE K+++  +DF+GINQYTA Y  D          Y  +        +NG  IG        + VP  +  A+MY+   Y + T+ +
Sbjct:  139 FLDPIFFGEYPREMREILSSNLPKFTPEEKKLLQNKVDFIGINQYTAIYAKDCIYSPCALNTYEGNALVYTTGVRNGAKIGKPTAFSTYFVVPESIESAVMYVNGRYKDTTIYI 252          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: LPH_RAT (Lactase-phlorizin hydrolase OS=Rattus norvegicus GN=Lct PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 1.906e-13
Identity = 54/152 (35.53%), Postives = 80/152 (52.63%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTR-SKADNYAAXRARDFHVGWFIHPI-VYGEYPKTMQNI------VGN---RLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHY 423
            R+GI+L+    EPL R S  D  AA R   F +GWF HPI V G+YP T   I       G+   +LP+FT+ E +++KGS DF+G++ YT+  +     K  +Q       N G  + ++  P  P+  S W+  VPWG+ + L +    Y
Sbjct:  598 RVGIVLNSDLAEPLDRKSPQDLAAAERFLHFMLGWFAHPIFVDGDYPTTSAQIQHINQQCGHPLAQLPEFTEAEKRLLKGSADFLGLSHYTSRLI----SKAGRQTCTSSYDNIG-GFSQHVDPEWPQTASPWIRVVPWGIRRLLRFASMEY 744          

HSP 2 Score: 68.9366 bits (167), Expect = 1.046e-11
Identity = 47/157 (29.94%), Postives = 71/157 (45.22%), Query Frame = 1
Query:    4 IGILLDFVWYEPLTRSKADNYAAXRAR-DFHVGWFIHPIVY-GEYPKTMQNIVGNR----------LPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTV 438
            I I +   W EP   +  ++  A R+   F  GWF HPI   G+YP+ M+  + +R          LP+FT+ E   +KG+ DF G N  T    Y  +L  P        ++A            P + S+WL   P+G  + L ++KE Y NP +
Sbjct: 1595 ISITISSDWGEPRDPTNREHVEAARSYVQFMGGWFAHPIFKNGDYPEVMKTRIRDRSLGAGLNKSRLPEFTESEKSRIKGTFDFFGFNHNTTVLAY--NLDYP---AAFSSFDADRGVASIADSSWPVSGSFWLKVTPFGFRRILNWLKEEYNNPPI 1746          

HSP 3 Score: 68.5514 bits (166), Expect = 1.366e-11
Identity = 54/156 (34.62%), Postives = 70/156 (44.87%), Query Frame = 1
Query:    4 IGILLDFVWYEPLTRS-KADNYAAXRARDFHVGWFIHPIVY-GEYPKTMQNIVGNR----------LPKFTKEEVKMVKGSIDFVGINQYTAYYMY--DPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGN 429
            I + L+  W EP     + D  AA R   F +GWF HPI   G+YP  M+  VGNR          LP FT+EE   V+G+ D    N YT+ ++    P L  P    Y  D       E N       +      +VPWG  + L +IKE YGN
Sbjct: 1122 ISLSLNTHWAEPKDPGLQRDVEAADRMLQFTMGWFAHPIFKNGDYPDVMKWTVGNRSELQHLASSRLPTFTEEEKNYVRGTADVFCHNTYTSVFVQHSTPRLNPP---SYDDDMELKL-IEMNS------STGVMHQDVPWGTRRLLNWIKEEYGN 1267          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: KLOT_RAT (Klotho OS=Rattus norvegicus GN=Kl PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.974e-11
Identity = 46/156 (29.49%), Postives = 72/156 (46.15%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTR-SKADNYAAXRARDFHVGWFIHPIV-YGEYPKTMQNIVGNR----LPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNG-VPIGPRANSYWLYN------VPWGMYKALMYIKEHYGN 429
            +I I L   W EP    S+ D   A R  +F VGW   PI   G+YP  M+  +  +    LP FT++E K+++GS DF+ ++ YT   +               DW      + N  + +    +  WL +      VPWG+ KAL +++  YG+
Sbjct:  727 KISIALQVDWIEPACPFSQKDKEVAERVLEFDVGWLAEPIFGSGDYPHVMREWLNQKNNFLLPYFTEDEKKLIRGSFDFLALSHYTTILV---------------DWEKEDPIKYNDYLEVQEMTDITWLNSPNQVAVVPWGLRKALNWLRFKYGD 867          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: KLOT_MOUSE (Klotho OS=Mus musculus GN=Kl PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.190e-11
Identity = 45/156 (28.85%), Postives = 73/156 (46.79%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTR-SKADNYAAXRARDFHVGWFIHPIV-YGEYPKTMQNIVGNR----LPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNG-VPIGPRANSYWLYN------VPWGMYKALMYIKEHYGN 429
            +I I L   W EP    S+ D   A R  +F +GW   PI   G+YP+ M++ +  +    LP FT++E K+V+GS DF+ ++ YT   +               DW      + N  + +    +  WL +      VPWG+ K L +++  YG+
Sbjct:  727 KISIALQADWIEPACPFSQNDKEVAERVLEFDIGWLAEPIFGSGDYPRVMRDWLNQKNNFLLPYFTEDEKKLVRGSFDFLAVSHYTTILV---------------DWEKEDPMKYNDYLEVQEMTDITWLNSPSQVAVVPWGLRKVLNWLRFKYGD 867          
The following BLAST results are available for this feature:
BLAST of CX288589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
MYR1_SINAL3.473e-1536.22Myrosinase MB1 (Fragment) OS=Sinapis alba PE=1 SV=... [more]
BGL21_ARATH3.473e-1532.24Beta-glucosidase 21 OS=Arabidopsis thaliana GN=BGL... [more]
MYR2_SINAL7.738e-1535.43Myrosinase MB2 (Fragment) OS=Sinapis alba PE=1 SV=... [more]
LPH_HUMAN2.251e-1431.37Lactase-phlorizin hydrolase OS=Homo sapiens GN=LCT... [more]
BGL14_ARATH2.251e-1444.83Beta-glucosidase 14 OS=Arabidopsis thaliana GN=BGL... [more]
GBA3_CAVPO6.551e-1430.82Cytosolic beta-glucosidase OS=Cavia porcellus GN=G... [more]
BGL15_ORYSJ8.555e-1435.09Putative beta-glucosidase 15 OS=Oryza sativa subsp... [more]
LPH_RAT1.906e-1335.53Lactase-phlorizin hydrolase OS=Rattus norvegicus G... [more]
KLOT_RAT3.974e-1129.49Klotho OS=Rattus norvegicus GN=Kl PE=1 SV=1[more]
KLOT_MOUSE5.190e-1128.85Klotho OS=Mus musculus GN=Kl PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC02002B03SK IF1 Citrus clementina cDNA clone C02002B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288589 ID=CX288589; Name=CX288589; organism=Citrus clementina; type=EST; length=446bp
AGAATCGGAATTCTCTTGGATTTTGTTTGGTATGAACCTCTTACGAGATC
AAAGGCTGACAACTATGCAGCTCANAGAGCAAGAGACTTTCATGTTGGAT
GGTTTATTCATCCTATCGTTTATGGTGAGTACCCAAAAACAATGCAGAAC
ATTGTTGGCAACAGGCTACCCAAGTTCACAAAAGAAGAGGTTAAAATGGT
AAAGGGATCAATAGATTTTGTGGGTATTAACCAGTATACTGCCTACTACA
TGTATGATCCGCATTTGAAACAACCAAAGCAAGTGGGATATCANCAGGAT
TGGAATGCTGGATTTGCTTATGAAAAGAATGGAGTGCCAATTGGTCCAAG
AGCAAATTCTTATTGGCTATACAATGTACCTTGGGGAATGTACAAGGCCT
TAATGTACATAAAAGAGCATTATGGGAACCCTACAGTCATTCTGTC
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