CX288594
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288594 vs. ExPASy Swiss-Prot
Match: CP4A6_RABIT (Cytochrome P450 4A6 OS=Oryctolagus cuniculus GN=CYP4A6 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.770e-17 Identity = 52/183 (28.42%), Postives = 86/183 (46.99%), Query Frame = 2 Query: 5 LTWTLYLLSKDCNSLMKAQEEIDRVL-QGRSASFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEEFLPERFDLEGPMPNETNTDFRFIPFSGGPRKCVGDQFXXXXXXXXXXXXXQNMNFELVPDQN--INMTTGATIHTTNGLYMK 544 ++W Y L+ + +EEI +L G S ++E + + + T CI E++RLYP P + R+ P + G + +S+Y +HH+ +VW E F P F P F+PFSGGPR C+G QF + FEL+PD + + ++NG++++ Sbjct: 330 ISWIFYALATHPEHQHRCREEIQGLLGDGASITWEHLDQMPYTTMCIKEALRLYPPVPGVGRQLSSPVTFPDGRSLPKGVIVTLSIYALHHNPKVWPNPEVFDPFPF-----APGSARHSHAFLPFSGGPRNCIGKQFAMNELKVAVALTL--VRFELLPDPKRVPDQKPRLVLKSSNGIHLR 505
BLAST of CX288594 vs. ExPASy Swiss-Prot
Match: CP4V3_RAT (Cytochrome P450 4V3 OS=Rattus norvegicus GN=Cyp4v3 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.725e-17 Identity = 49/140 (35.00%), Postives = 77/140 (55.00%), Query Frame = 2 Query: 5 LTWTLYLLSKDCNSLMKAQEEIDRVLQGRS---ASFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEEFLPERFDLEGPMPNETNTDFRFIPFSGGPRKCVGDQF 415 + W+LYLL + K +E+D V GRS + ED+K LK+L I E++R++P P+ R D + G YK++ G + +I Y +H + + EEF PERF P ++ + ++PFS GPR C+G +F Sbjct: 338 INWSLYLLGSNPEVQRKVDKELDDVF-GRSHRPVTLEDLKKLKYLDCVIKETLRVFPSVPLFARSLSEDCEVAG-YKISKGTEAVIIPYALHRDPRYFPDPEEFQPERF---FPENSQGRHPYAYVPFSAGPRNCIGQKF 472
BLAST of CX288594 vs. ExPASy Swiss-Prot
Match: CP4AC_RAT (Cytochrome P450 4A12 OS=Rattus norvegicus GN=Cyp4a12 PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 4.725e-17 Identity = 48/161 (29.81%), Postives = 75/161 (46.58%), Query Frame = 2 Query: 5 LTWTLYLLSKDCNSLMKAQEEIDRVL-QGRSASFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEEFLPERFDLEGPMPNETNTDFRFIPFSGGPRKCVGDQFXXXXXXXXXXXXXQNMNFELVPD 484 ++W Y L+ + ++EI +L G S +++D+ + + T CI E++R+YP + R P + G +M+S Y +HH+ VW E F P RF P + F+PFSGG R C+G QF + FEL+PD Sbjct: 328 ISWIFYALATNPEHQQGCRKEIQSLLGDGASITWDDLDKMPYTTMCIKEALRIYPPVTAVSRMLSTPVTFPDGRSLPKGITVMLSFYGLHHNPTVWPNPEVFDPYRF-----APESSRHSHSFLPFSGGARNCIGKQFAMNELKVAVALTL--LRFELLPD 481
BLAST of CX288594 vs. ExPASy Swiss-Prot
Match: CP4A4_RABIT (Cytochrome P450 4A4 OS=Oryctolagus cuniculus GN=CYP4A4 PE=1 SV=3) HSP 1 Score: 87.4261 bits (215), Expect = 4.725e-17 Identity = 49/161 (30.43%), Postives = 78/161 (48.45%), Query Frame = 2 Query: 5 LTWTLYLLSKDCNSLMKAQEEIDRVL-QGRSASFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEEFLPERFDLEGPMPNETNTDFRFIPFSGGPRKCVGDQFXXXXXXXXXXXXXQNMNFELVPD 484 ++W Y L+ + +EEI +L G S ++E + + + T CI E++RLYP P + R+ P + G + +S+Y +H++ +VW+ E F P RF P+ F+PFSGG R C+G QF + FEL+PD Sbjct: 330 VSWIFYALATHPEHQHRCREEIQGLLGDGASITWEHLDQMPYTTMCIKEALRLYPPVPSVTRQLSKPVTFPDGRSLPKGVILFLSIYGLHYNPKVWQNPEVFDPFRF-----APDSAYHSHAFLPFSGGARNCIGKQFAMRELKVAVALTL--VRFELLPD 483
BLAST of CX288594 vs. ExPASy Swiss-Prot
Match: CYPD_BACSU (Probable bifunctional P-450/NADPH-P450 reductase 1 OS=Bacillus subtilis GN=cypD PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 6.171e-17 Identity = 44/139 (31.65%), Postives = 74/139 (53.24%), Query Frame = 2 Query: 2 VLTWTLYLLSKDCNSLMKAQEEIDRVLQGRSASFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWER-AEEFLPERFDLEGPMPNETNTDFRFIPFSGGPRKCVGDQF 415 +L++ Y L K + L KA EE+DRVL + +++ + +L ++ +NES+RL+P P + D V+ G + + I + + +H W + AEEF PERF+ + +P+ + PF G R C+G QF Sbjct: 275 LLSFATYFLLKHPDKLKKAYEEVDRVLTDAAPTYKQVLELTYIRMILNESLRLWPTAPAFSLYPKEDTVIGGKFPITTNDRISVLIPQLHRDRDAWGKDAEEFRPERFEHQDQVPHHA-----YKPFGNGQRACIGMQF 408
BLAST of CX288594 vs. ExPASy Swiss-Prot
Match: CP3AB_MOUSE (Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 6.171e-17 Identity = 52/158 (32.91%), Postives = 84/158 (53.16%), Query Frame = 2 Query: 5 LTWTLYLLSKDCNSLMKAQEEIDRVLQGRSA-SFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEEFLPERFDLEGPMPNETNTD-FRFIPFSGGPRKCVGDQFXXXXXXXXXXXXXQNMNFE 472 L++TL+ L+ + K Q+EID L ++ +++ + ++++L +NE++RLYP L R + D L G Y + G +MI Y +HH Q W EEF PERF E N+ + D + ++PF GPR C+G +F QN +F+ Sbjct: 315 LSFTLHSLATHPDIQKKLQDEIDEALPNKAPPTYDTVMEMEYLDMVLNETLRLYPIANRLERVCKKDVELNGVY-IPKGSTVMIPSYALHHDPQHWSEPEEFQPERFSKE----NKGSIDPYVYLPFGNGPRNCLGMRFALMNMKLALTKIMQNFSFQ 467
BLAST of CX288594 vs. ExPASy Swiss-Prot
Match: CP4F3_MOUSE (Leukotriene-B(4) omega-hydroxylase 2 OS=Mus musculus GN=Cyp4f3 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.060e-17 Identity = 48/140 (34.29%), Postives = 72/140 (51.43%), Query Frame = 2 Query: 5 LTWTLYLLSKDCNSLMKAQEEIDRVLQGRSAS---FEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEEFLPERFDLEGPMPNETNTDFRFIPFSGGPRKCVGDQF 415 L+W LY L++ + ++E+ +L+ R ++D+ L FLT CI ES+RL+P + R D VLP + G IS++ HH+ VW E + P RFD + + + FIPFS GPR C+G F Sbjct: 337 LSWILYNLARHPEYQERCRQEVRELLRDREPEEIEWDDLAQLPFLTMCIKESLRLHPPVTAISRCCTQDIVLPDGRVIPKGVISRISIFGTHHNPAVWPDPEVYDPFRFDADNV---KGRSPLAFIPFSAGPRNCIGQTF 473
BLAST of CX288594 vs. ExPASy Swiss-Prot
Match: CP4A7_RABIT (Cytochrome P450 4A7 OS=Oryctolagus cuniculus GN=CYP4A7 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.060e-17 Identity = 50/161 (31.06%), Postives = 75/161 (46.58%), Query Frame = 2 Query: 5 LTWTLYLLSKDCNSLMKAQEEIDRVL-QGRSASFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEEFLPERFDLEGPMPNETNTDFRFIPFSGGPRKCVGDQFXXXXXXXXXXXXXQNMNFELVPD 484 ++W Y L+ + +EEI +L G S ++E + + + T CI E++RLYP P + + P + G I +S+Y +HH+ +VW E F P RF P F+PFSGG R C+G QF + FEL+PD Sbjct: 331 ISWIFYALATHPEHQHRCREEIQGLLGDGASITWEHLDKMPYTTMCIKEALRLYPPVPGVGSKLSSPVTFPDGRSLPKGIIITLSIYGLHHNPKVWPNPEVFDPSRF-----APGSARHSHAFLPFSGGSRNCIGKQFAMNELKVAVALTL--VRFELLPD 484
BLAST of CX288594 vs. ExPASy Swiss-Prot
Match: CP4V2_HUMAN (Cytochrome P450 4V2 OS=Homo sapiens GN=CYP4V2 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.053e-16 Identity = 48/139 (34.53%), Postives = 73/139 (52.52%), Query Frame = 2 Query: 5 LTWTLYLLSKDCNSLMKAQEEIDRVL--QGRSASFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEEFLPERFDLEGPMPNETNTDFRFIPFSGGPRKCVGDQF 415 + W+LYLL + K E+D V R A+ ED+K L++L I E++RL+P P+ R D + G Y+V G + +I Y +H + + EEF PERF P + + ++PFS GPR C+G +F Sbjct: 338 INWSLYLLGSNPEVQKKVDHELDDVFGKSDRPATVEDLKKLRYLECVIKETLRLFPSVPLFARSVSEDCEVAG-YRVLKGTEAVIIPYALHRDPRYFPNPEEFQPERF---FPENAQGRHPYAYVPFSAGPRNCIGQKF 472
BLAST of CX288594 vs. ExPASy Swiss-Prot
Match: CP3AG_MOUSE (Cytochrome P450 3A16 OS=Mus musculus GN=Cyp3a16 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.053e-16 Identity = 51/159 (32.08%), Postives = 84/159 (52.83%), Query Frame = 2 Query: 2 VLTWTLYLLSKDCNSLMKAQEEIDRVLQGRSA-SFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEEFLPERFDLEGPMPNETNTD-FRFIPFSGGPRKCVGDQFXXXXXXXXXXXXXQNMNFE 472 +L++T+Y L+ + K QEEID L ++ +++ + +++L +NE++RLYP L R + D + G Y + G ++I Y +HH Q W EEF PERF E N+ + D + ++PF GPR C+G +F QN +F+ Sbjct: 314 ILSFTVYSLATHPDIQKKLQEEIDEALPNKAPPTYDTVMAMEYLDMVLNETLRLYPITNRLQRVCKKDVEINGIY-IPKGSTVIIPSYVLHHDPQHWPEPEEFQPERFSKE----NKGSIDPYVYLPFGNGPRNCIGMRFALMNMKLALIKVLQNFSFQ 467 The following BLAST results are available for this feature:
BLAST of CX288594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 275
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288594 ID=CX288594; Name=CX288594; organism=Citrus clementina; type=EST; length=544bpback to top |