CX288594

Overview
NameCX288594
Unique NameCX288594
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length544
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288594 vs. ExPASy Swiss-Prot
Match: C6A22_DROME (Cytochrome P450 6a22 OS=Drosophila melanogaster GN=Cyp6a22 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.867e-14
Identity = 53/187 (28.34%), Postives = 92/187 (49.20%), Query Frame = 2
Query:    5 LTWTLYLLSKDCNSLMKAQEEIDRVLQGRSASF--EDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGN--YKVNAGQDIMISVYNIHHSSQVWERAEEFLPERFDLEGPMPNETNTDFRFIPFSGGPRKCVGDQFXXXXXXXXXXXXXQNMNFELVP--DQNIN-MTTGATIHTTNGLYMK 544
            L + LY L+K      K +EEID+ L+  +  F  + +++L+++   I E++R YP  P L R ++      G+  + +  GQ ++I VY IHH   ++    +F+PERF  +      T     ++PF  GPR C+G +F             +N +F + P  D  I  + +   +   NG+Y+K
Sbjct:  307 LGFALYELAKQPALQAKLREEIDQALRLHNGEFTYDSMQELRYMELVIAETLRKYPILPQLTRISRHLYAAKGDRHFYIEPGQMLLIPVYGIHHDPALYPEPHKFIPERFLADQLAQRPTAA---WLPFGDGPRNCIGMRFGKMQTTIGLVSLLRNFHFSVCPRTDPKIEFLKSNILLCPANGIYLK 490          
BLAST of CX288594 vs. ExPASy Swiss-Prot
Match: CP4Z1_HUMAN (Cytochrome P450 4Z1 OS=Homo sapiens GN=CYP4Z1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.744e-14
Identity = 47/163 (28.83%), Postives = 75/163 (46.01%), Query Frame = 2
Query:    5 LTWTLYLLSKDCNSLMKAQEEIDRVL-QGRSASFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEEFLPERFDLEGPMPNETNTDFRFIPFSGGPRKCVGDQFXXXXXXXXXXXXXQNMNFELVPDQN 490
            ++W LY L+K      + ++EI  +L  G S ++E +  + + T CI E +RLY     + R        P    + AG  + I+++ +HH+   WE  + F P RF  E    +E    + FIPFS G R C+G  F               + F+L PD +
Sbjct:  323 ISWILYCLAKYPEHQQRCRDEIRELLGDGSSITWEHLSQMPYTTMCIKECLRLYAPVVNISRLLDKPITFPDGRSLPAGITVFINIWALHHNPYFWEDPQVFNPLRFSREN---SEKIHPYAFIPFSAGLRNCIGQHFAIIECKVAVALTL--LRFKLAPDHS 480          
BLAST of CX288594 vs. ExPASy Swiss-Prot
Match: CP17A_HUMAN (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Homo sapiens GN=CYP17A1 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.744e-14
Identity = 46/138 (33.33%), Postives = 75/138 (54.35%), Query Frame = 2
Query:    2 VLTWTLYLLSKDCNSLMKAQEEIDR-VLQGRSASFEDIKDLKFLTRCINESMRLYPHPPVLI-RRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEEFLPERFDLEGPMPNETNTDFRFIPFSGGPRKCVGD 409
            V+ WTL  L  +     K  EEID+ V   R+ +  D   L  L   I E +RL P  P+LI  +A VD  + G + V+ G +++I+++ +HH+ + W + ++F+PERF L        +    ++PF  GPR C+G+
Sbjct:  310 VVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSI-GEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERF-LNPAGTQLISPSVSYLPFGAGPRSCIGE 445          
BLAST of CX288594 vs. ExPASy Swiss-Prot
Match: C13A8_CAEEL (Putative cytochrome P450 CYP13A8 OS=Caenorhabditis elegans GN=cyp-13A8 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 3.744e-14
Identity = 43/138 (31.16%), Postives = 70/138 (50.72%), Query Frame = 2
Query:    5 LTWTLYLLSKDCNSLMKAQEEIDRVLQGRSASFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVW-ERAEEFLPERFDLEGPMPNETNTDFRFIPFSGGPRKCVGDQF 415
            L++  Y L+ +     K Q+E+D+       +F+ +  LK++   I ES+RL+P       R  + + + G   V AG D+MI  + +HH   VW    EEF PER+D   P+  +      ++ F  GPR C+G +F
Sbjct:  329 LSYVTYFLALNPKIQSKLQDEVDKECPNDEITFDQLSKLKYMDNVIKESLRLFPFASFANSRRCMRNTVIGEQIVEAGVDVMIDTWTLHHDKNVWGNDVEEFKPERWD--SPLTPQQ----AYLSFGAGPRVCLGMRF 460          
BLAST of CX288594 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.890e-14
Identity = 55/183 (30.05%), Postives = 85/183 (46.45%), Query Frame = 2
Query:    5 LTWTLYLLSKDCNSLMKAQEEIDRVLQGRSASFED-IKDLKFLTRCINESMRLYPHPPVLIRRAQVDDV-LPGNYKVNAGQDIMISVYNIHHSSQVWERAEEFLPERF-----DLEGPMPNETNTDFRFIPFSGGPRKCVGDQFXXXXXXXXXXXXXQNMNFEL---VPDQNINMTTGATIHT 523
            L WT+  + +   ++   Q E+  + QG+S   ED +K++++L   I ES+RL+P   +L+ R  ++DV L G Y + A    +I+V+ I      WE  EEF PERF     D++G         F  +PF  G R C G  F                NF L      ++++MT    I T
Sbjct:  317 LDWTMADVLRQPRAMKTLQNEVRGLAQGKSEITEDDLKNMQYLRAVIKESLRLHPPNSLLVPRESMEDVKLLGYYHIPARTQALINVWAIGRDPLSWENPEEFCPERFLNNDIDMKG-------LKFELLPFGSGRRGCPGSSFAIAVIELALARLVHKFNFALPKGTKPEDLDMTECTGIAT 492          
BLAST of CX288594 vs. ExPASy Swiss-Prot
Match: CP17A_PANTR (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Pan troglodytes GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.386e-14
Identity = 46/138 (33.33%), Postives = 74/138 (53.62%), Query Frame = 2
Query:    2 VLTWTLYLLSKDCNSLMKAQEEIDR-VLQGRSASFEDIKDLKFLTRCINESMRLYPHPPVLI-RRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEEFLPERFDLEGPMPNETNTDFRFIPFSGGPRKCVGD 409
            V+ WTL  L  +     K  EEID+ V   R+ +  D   L  L   I E +RL P  P+LI  +A VD  + G + V+ G  ++I+++ +HH+ + W + ++F+PERF L        +    ++PF  GPR C+G+
Sbjct:  310 VVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSI-GEFAVDKGTQVIINLWALHHNEKEWHQPDQFMPERF-LNPAGTQLISPSVSYLPFGAGPRSCIGE 445          
BLAST of CX288594 vs. ExPASy Swiss-Prot
Match: CP17A_MOUSE (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mus musculus GN=Cyp17a1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.386e-14
Identity = 47/171 (27.49%), Postives = 81/171 (47.37%), Query Frame = 2
Query:    2 VLTWTLYLLSKDCNSLMKAQEEIDRVLQ-GRSASFEDIKDLKFLTRCINESMRLYPHPPVLI-RRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEEFLPERFDLEGPMPNETNTDFRFIPFSGGPRKCVGDQFXXXXXXXXXXXXXQNMNFELVPDQNINMTTG 508
            VL W L  L  +     K Q+EID+ +   R+ SF D   L  L   I E +R+ P  P+LI  +A +D  + G + +     ++I+++ +HH    W++ + F+PERF L+    +       ++PF  GPR C+G+               Q  +F++  D+ +    G
Sbjct:  309 VLNWILAFLVHNPEVKRKIQKEIDQYVGFSRTPSFNDRTHLLMLEATIREVLRIRPVAPLLIPHKANIDSSI-GEFAIPKDTHVIINLWALHHDKNEWDQPDRFMPERF-LDPTGSHLITPTPSYLPFGAGPRSCIGEALARQELFIFMALLLQRFDFDVSDDKQLPCLVG 477          
BLAST of CX288594 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 6.386e-14
Identity = 45/135 (33.33%), Postives = 65/135 (48.15%), Query Frame = 2
Query:    5 LTWTLYLLSKDCNSLMKAQEEIDRVL-QGRSASFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEEFLPERFDLEGPMPNETNTDFRFIPFSGGPRKCVG 406
            LTW + LL K  + L K +EE++  + + R  +  DI  L +L   I E++RLYP  P    R   +D   G Y +  G  +M +++ IH    VW    EF PERF       +    +F  +PF  G R C G
Sbjct:  349 LTWAMCLLLKHPHVLEKLKEELNTYIGKERCVNESDINKLVYLHAIIKETLRLYPPAPFSSPREFTEDCTIGGYHIKKGTRLMPNLWKIHRDPSVWPDPLEFKPERFLSTHKDVDVRGQNFELLPFGSGRRMCAG 483          
BLAST of CX288594 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.386e-14
Identity = 57/191 (29.84%), Postives = 86/191 (45.03%), Query Frame = 2
Query:    2 VLTWTLYLLSKDCNSLMKAQEEIDRVLQGRSA-SFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVW-ERAEEFLPER-----FDLEGPMPNETNTDFRFIPFSGGPRKCVGDQFXXXXXXXXXXXXXQNMNF----ELVPDQ-NINMTTGATIHTTNGLY 538
            ++ W +  L      L + QEE+  + +G S+ S +DIKD+ +L   I E+MRL+P  P+++      DV  G+Y + AG  +MI+ + I   +  W   AE+F PER      D  G        +F  IPF  G R C    F                ++    E + DQ N+  +TG  IH    LY
Sbjct:  300 LMEWAMTELLHRPECLNRLQEEVRTICKGNSSVSEDDIKDMNYLKAVIKETMRLHPPLPLMVPHESTQDVRLGDYHIPAGTQVMINAWAIGREAATWGPDAEKFRPERHLNSSVDFRG-------HNFELIPFGAGRRICPAISFAVILIEVTLANLVHRYDWRLPEEYIEDQTNVAESTGMVIHRLFPLY 483          
BLAST of CX288594 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.341e-14
Identity = 48/160 (30.00%), Postives = 75/160 (46.88%), Query Frame = 2
Query:    5 LTWTLYLLSKDCNSLMKAQEEIDRVL-QGRSASFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEEFLPERFDLEGPMPNETNTDFRFIPFSGGPRKCVGDQFXXXXXXXXXXXXXQNMNFELVP 481
            + W +  L        K ++EIDRVL  G   +  DI+ L +L   + E++RL    P+L+    + D   G Y + A   I+++ + + ++   W++ EEF PERF  E  +      DFR++PF  G R C G                Q  NFEL+P
Sbjct:  316 IEWGIAELVNHPEIQQKLRDEIDRVLGAGHQVTEPDIQKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPAHWKKPEEFRPERFFEEESLVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQ--NFELLP 473          
The following BLAST results are available for this feature:
BLAST of CX288594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
C6A22_DROME2.867e-1428.34Cytochrome P450 6a22 OS=Drosophila melanogaster GN... [more]
CP4Z1_HUMAN3.744e-1428.83Cytochrome P450 4Z1 OS=Homo sapiens GN=CYP4Z1 PE=2... [more]
CP17A_HUMAN3.744e-1433.33Steroid 17-alpha-hydroxylase/17,20 lyase OS=Homo s... [more]
C13A8_CAEEL3.744e-1431.16Putative cytochrome P450 CYP13A8 OS=Caenorhabditis... [more]
C71A4_SOLME4.890e-1430.05Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
CP17A_PANTR6.386e-1433.33Steroid 17-alpha-hydroxylase/17,20 lyase OS=Pan tr... [more]
CP17A_MOUSE6.386e-1427.49Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mus mu... [more]
C82A1_PEA6.386e-1433.33Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
C71AM_ARATH6.386e-1429.84Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]
TCMO_SOYBN8.341e-1430.00Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]

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Properties
Property NameValue
Genbank descriptionC02002B08SK IF1 Citrus clementina cDNA clone C02002B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288594 ID=CX288594; Name=CX288594; organism=Citrus clementina; type=EST; length=544bp
AGTTTTGACCTGGACACTATATCTTCTAAGCAAGGATTGTAACTCATTGA
TGAAAGCACAAGAAGAGATTGATAGAGTATTGCAGGGAAGATCTGCATCC
TTTGAAGACATAAAAGATCTGAAATTCCTAACACGTTGCATAAATGAGTC
AATGCGTCTCTACCCACATCCTCCTGTCTTGATAAGAAGAGCTCAAGTAG
ATGATGTGCTCCCTGGAAATTACAAGGTTAATGCTGGTCAAGATATAATG
ATTTCAGTTTACAATATCCACCATTCCTCACAGGTCTGGGAGAGAGCAGA
AGAGTTTTTACCAGAAAGGTTTGACTTGGAAGGCCCCATGCCCAATGAAA
CAAATACAGATTTTAGATTCATTCCTTTCAGCGGAGGGCCTCGGAAGTGT
GTTGGAGATCAGTTTGCTCTGCTAGAGGCTATTGTTGCTCTAGCAATACT
CTTGCAGAATATGAACTTTGAACTAGTTCCTGATCAGAATATCAACATGA
CTACTGGAGCAACCATACACACAACGAATGGTTTATACATGAAA
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