CX288634
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP2_BACC1 (Prolyl-tRNA synthetase 2 OS=Bacillus cereus (strain ATCC 10987) GN=proS2 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.334e-18 Identity = 39/112 (34.82%), Postives = 58/112 (51.79%), Query Frame = 2 Query: 188 NYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRK-MILAPWCDEEEVEKDVK 520 N +PGWK++ +EMKG+P+ +E+GPKD+ +QV VRRD K + M SLF AK RD V ++E + +++ I A WC E E+ +K Sbjct: 327 NKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFIAMEQLEERIPALLEEIHNSLFNKAKVFRDENTYSVTKFEEMKKVADEKQGFIKAMWCGELACEEKLK 438 HSP 2 Score: 40.817 bits (94), Expect = 5.334e-18 Identity = 15/27 (55.56%), Postives = 23/27 (85.19%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPV 84 ++MVH D+ GL++PPKVA VQV+ +P+ Sbjct: 271 LIMVHSDNNGLVMPPKVAPVQVVIVPI 297
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_UNCMA (Prolyl-tRNA synthetase OS=Uncultured methanogenic archaeon RC-I GN=proS PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.936e-18 Identity = 42/118 (35.59%), Postives = 56/118 (47.46%), Query Frame = 2 Query: 197 PGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEE----EVEKDVKARTKGE 538 PG KY WEMKG P IEIGP+D+ N+ V VRRD G K +PM L AA+ A ++ +T DE + + + PWC E+ E+E V + GE Sbjct: 332 PGAKYYKWEMKGTPFRIEIGPRDIKNNSVMLVRRD-GKKESIPMDGLPETVRNKLFEFQTDLLNAARDSMLARVKACETLDEAKQQI-ENGWATMPWCGEKACGLEMENAVNCKLLGE 447 HSP 2 Score: 43.8986 bits (102), Expect = 6.936e-18 Identity = 20/48 (41.67%), Postives = 31/48 (64.58%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDADTQGIFDACTATVEKL 147 ++ +HGD+KGL+LPP + QV+ IP+ +K D G+ +AC E L Sbjct: 270 VIGIHGDNKGLVLPPNASQTQVVIIPIIFK-KDDGGVKEACQKVKELL 316
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_PORGI (Prolyl-tRNA synthetase OS=Porphyromonas gingivalis GN=proS PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.171e-17 Identity = 38/125 (30.40%), Postives = 59/125 (47.20%), Query Frame = 2 Query: 158 GIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKARTK 532 GI D DN PGWK++ +E+KG+P+ + +G +DL N+ + RRD K + + ++F A R V +++EF E + ILA W E E+ +KA TK Sbjct: 335 GISVKYDNSDNKKPGWKFAEYELKGIPVRLAMGARDLENNTIEIARRDTLTKETVGLDGIEETVATLLDDIQKNIFQKALNYRKEHTITVDSYEEFKEKIEDGGFILAHWDGTSETEERIKAETK 459 HSP 2 Score: 39.2762 bits (90), Expect = 1.171e-17 Identity = 18/48 (37.50%), Postives = 27/48 (56.25%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDADTQGIFDACTATVEKL 147 ++M H DD GL+LPPK+A QV+ IP+ + I + T + L Sbjct: 284 LIMSHSDDNGLVLPPKLAPYQVVIIPIYRNEEQLAQIDEKATQITQAL 331
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_AZOPC (Prolyl-tRNA synthetase OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=proS PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.523e-17 Identity = 35/124 (28.23%), Postives = 58/124 (46.77%), Query Frame = 2 Query: 161 IRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKARTK 532 I D DN PGWK++ +E+KG+P+ + +G +DL N + RRD K + + + +++ A R A V +DEF E + + I+A W + E+ +K TK Sbjct: 336 INVKYDNTDNKKPGWKFAEYELKGIPIRLTLGTRDLENGTIEVSRRDTLTKETISINNITDYANNLLNDIQQNIYQKALDYRSANTVYVDNYDEFKERIEEGGFIMAHWDGTAKTEEQIKKETK 459 HSP 2 Score: 40.0466 bits (92), Expect = 1.523e-17 Identity = 17/42 (40.48%), Postives = 26/42 (61.90%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDADTQGIFDACT 129 ++M+H DD GL+LPPK+A Q++ IPV + I + T Sbjct: 284 LIMMHSDDNGLVLPPKLAPCQIVIIPVSKDRTSLEDINEKAT 325
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_IGNH4 (Prolyl-tRNA synthetase OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=proS PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 1.524e-17 Identity = 34/115 (29.57%), Postives = 55/115 (47.83%), Query Frame = 2 Query: 158 GIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEE 502 G R D D +PG KY WE+KGVP IEIG K++ D++ RRD ++ + G ++ A + I+ V++ +E E + +R ++ PWC +E Sbjct: 319 GWRTVLDDRDELTPGAKYYEWELKGVPFRIEIGKKEVEGDELTVARRDLKKRVKVKKGEIHQRLKEMSDDMLNNMRERAWSFMKSRIKRVRSLEEAKELVEKRYVVELPWCGSKE 433 HSP 2 Score: 48.521 bits (114), Expect = 1.524e-17 Identity = 19/35 (54.29%), Postives = 29/35 (82.86%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDADTQ 108 +V VHGD++GL+LPP+VA VQV+ +P+P K+ + Q Sbjct: 267 LVAVHGDERGLVLPPEVAPVQVVIVPIPQKEEEQQ 301
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_CHLP8 (Prolyl-tRNA synthetase OS=Chlorobaculum parvum (strain NCIB 8327) GN=proS PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 1.981e-17 Identity = 42/143 (29.37%), Postives = 70/143 (48.95%), Query Frame = 2 Query: 107 KEFLMHALQLLKN*CEAGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPM-GSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKARTK 532 +E HA + K + GI D +N SPGWK++ +E++G+P+ IE+GP+D+A + RRD K ++ + +L+ A Q R TW+EF +A ++ ++A W +E E +K TK Sbjct: 299 EEVRAHARFIAKALNKHGISTFVDDSENNSPGWKFAEYELQGIPVRIELGPRDIAEGKCIVARRDTFEKTEVLLDAEMTENIEEILNNIQQNLYERALQFRQDNTVEATTWEEF-KAGVEKGFVIAHWDGTDETEALIKEETK 440 HSP 2 Score: 42.3578 bits (98), Expect = 1.981e-17 Identity = 17/27 (62.96%), Postives = 23/27 (85.19%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPV 84 ++M H DDKGL+LPPK+AS QV+ IP+ Sbjct: 267 LIMAHSDDKGLVLPPKLASRQVVIIPI 293
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_METTH (Prolyl-tRNA synthetase OS=Methanobacterium thermoautotrophicum GN=proS PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 4.352e-17 Identity = 45/143 (31.47%), Postives = 71/143 (49.65%), Query Frame = 2 Query: 110 EFLMHALQLLKN*CEA-GIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILA-PWCDEEEVEKDVKARTK 532 E +M A + L++ EA G R + D D G KY WEM+GVPL +EIGP+DL RRD G K+ + +L A +R ++ I+ +T +E + +++ I++ WC EEE DV+ + + Sbjct: 309 EEVMEACRELRSRLEAAGFRVHLDDRD-IRAGRKYYEWEMRGVPLRVEIGPRDLEKGAAVISRRDTGEKVTADLQGIEETLRELMKDILENLRTRAWERMESEIREAETLEEASRIVDEKRGIISFMWCGEEECGMDVEEKVR 450 HSP 2 Score: 41.5874 bits (96), Expect = 4.352e-17 Identity = 17/41 (41.46%), Postives = 29/41 (70.73%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDADTQGIFDAC 126 ++ +HGD+ GL LPP VA+ QV+ +P+ +K A + + +AC Sbjct: 276 VIAIHGDESGLCLPPDVAAHQVVIVPIIFKKA-AEEVMEAC 315
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_BACTN (Prolyl-tRNA synthetase OS=Bacteroides thetaiotaomicron GN=proS PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.653e-17 Identity = 38/125 (30.40%), Postives = 62/125 (49.60%), Query Frame = 2 Query: 158 GIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKARTK 532 GI D DN PG+K++ +E+KGVP+ + +G +DL N+ + +RRD K + +++ A R++ I V T++EF E + + ILA W E E+ +K TK Sbjct: 335 GISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETVTCDGIETYVQKLLEEIQANIYKKALDYRNSKITTVDTYEEFKEKIEEGGFILAHWDGTTETEEKIKEDTK 459 HSP 2 Score: 40.0466 bits (92), Expect = 5.653e-17 Identity = 18/48 (37.50%), Postives = 27/48 (56.25%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDADTQGIFDACTATVEKL 147 ++M H DD GL+LPP +A +QV+ +P+ D + I V KL Sbjct: 284 LIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVAKL 331
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_FLAPJ (Prolyl-tRNA synthetase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=proS PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 1.242e-16 Identity = 41/113 (36.28%), Postives = 53/113 (46.90%), Query Frame = 2 Query: 197 PGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQR-KMILAPWCDEEEVEKDVKARTK 532 PG+K++ WE+KGVP+ I IGPKDL N+ RRD K P LF A Q RD I V ++EF + L + I A W E E+ +K TK Sbjct: 346 PGFKFAEWELKGVPVRIAIGPKDLENETFEIARRDTLTKEVKPKEGIVKYISDLLAQIQSDLFSKALQYRDTHITEVSDFEEFKKVLENKGGFISAHWDGTPETEEKIKELTK 458 HSP 2 Score: 39.6614 bits (91), Expect = 1.242e-16 Identity = 16/37 (43.24%), Postives = 25/37 (67.57%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDADTQGI 114 +VM H DD GL+LPP +A +QV+ +P+ D + + I Sbjct: 282 LVMTHSDDNGLVLPPNLAPIQVVIVPIFKTDEEFEKI 318
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_AERPE (Prolyl-tRNA synthetase OS=Aeropyrum pernix GN=proS PE=3 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 1.615e-16 Identity = 36/136 (26.47%), Postives = 62/136 (45.59%), Query Frame = 2 Query: 152 EAGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSL------FVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKARTKGEM 541 +AG+R + D + PG K+ +WE KGVP+ +EIG ++ D + RRD K ++P+G S+ F + R ++ + W E G+R + PWC E +++ R G++ Sbjct: 322 KAGLRVHVDDREWERPGAKFYYWEAKGVPIRVEIGLREAEQDTLTIARRDTLEKTEVPLGEAGNRIRELMAQIESSMRERAKSFFGERLLRTESLEEARDWVE-----GRRGIAEIPWCGRESCGLEMEERVNGKV 452 HSP 2 Score: 44.2838 bits (103), Expect = 1.615e-16 Identity = 17/36 (47.22%), Postives = 27/36 (75.00%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDADTQG 111 ++ VHGDD+GL++PP VA +QV+ IP+ D + +G Sbjct: 272 LIAVHGDDRGLVIPPSVAPIQVVVIPITPGDEEKRG 307 The following BLAST results are available for this feature:
BLAST of CX288634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 136
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288634 ID=CX288634; Name=CX288634; organism=Citrus clementina; type=EST; length=547bpback to top |