CX288644

Overview
NameCX288644
Unique NameCX288644
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length566
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: PAK6_MOUSE (Serine/threonine-protein kinase PAK 6 OS=Mus musculus GN=Pak6 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.939e-13
Identity = 40/102 (39.22%), Postives = 60/102 (58.82%), Query Frame = 3
Query:   18 KSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPIPDS--LSKDAQDFIKQCVQVNPNDRPTAAQLLDHPFV 317
            KS  GT +WMAPEVI+     Y    DIWSLG  V+EM+  + PY     + A+ ++   +PP + +S  +S   +DF+ + +   P +R TA +LLDHPF+
Sbjct:  560 KSLVGTPYWMAPEVISRSL--YATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSAPPKLKNSYKVSPVLRDFLDRMLVREPQERATAQELLDHPFL 659          
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: M4K4_MOUSE (Mitogen-activated protein kinase kinase kinase kinase 4 OS=Mus musculus GN=Map4k4 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.939e-13
Identity = 42/101 (41.58%), Postives = 53/101 (52.48%), Query Frame = 3
Query:   30 GTAFWMAPEVI---NNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPIPD-SLSKDAQDFIKQCVQVNPNDRPTAAQLLDHPFVK 320
            GT +WMAPEVI    N +  Y   +D+WS G T +EM     P   M  M ALF I R  PP +     SK    FI+ C+  N   RP+  QLL HPF++
Sbjct:  189 GTPYWMAPEVIACDENPDATYDYRSDLWSCGITAIEMAEGGPPLCDMHPMRALFLIPRNPPPRLKSKKWSKKFFSFIEGCLVKNYMQRPSTEQLLKHPFIR 289          
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: M4K3_MOUSE (Mitogen-activated protein kinase kinase kinase kinase 3 OS=Mus musculus GN=Map4k3 PE=2 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 5.939e-13
Identity = 43/109 (39.45%), Postives = 59/109 (54.13%), Query Frame = 3
Query:   18 KSCRGTAFWMAPEVINNKNKG-YGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGS--PPPIPDSL--SKDAQDFIKQCVQVNPNDRPTAAQLLDHPFVKRLL 329
            KS  GT +WMAPEV   + KG Y    D+W++G T +E+   Q P   +  M ALF + + +  PP + D L  S     F+K  +  NP  RP A +LL HPFV + L
Sbjct:  169 KSFIGTPYWMAPEVAAVERKGGYNQLCDLWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKLKWSNSFHHFVKMALTKNPKKRPNAEKLLQHPFVTQPL 277          
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: TAOK3_PONAB (Serine/threonine-protein kinase TAO3 OS=Pongo abelii GN=TAOK3 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.757e-13
Identity = 39/100 (39.00%), Postives = 59/100 (59.00%), Query Frame = 3
Query:   30 GTAFWMAPEVINNKNKG-YGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPIPDSLSKDA-QDFIKQCVQVNPNDRPTAAQLLDHPFVKR 323
            GT +WMAPEVI   ++G Y    D+WSLG T +E+   +     M  M+AL+ I +   P +  +   D+ + F+  C+Q  P +RPT+A+LL H FV+R
Sbjct:  180 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPALFNMNAMSALYHIAQNDSPTLQSNEWTDSFRRFVDYCLQKIPQERPTSAELLRHDFVRR 279          
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: TAOK2_XENLA (Serine/threonine-protein kinase TAO2 OS=Xenopus laevis GN=taok2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.757e-13
Identity = 39/100 (39.00%), Postives = 59/100 (59.00%), Query Frame = 3
Query:   30 GTAFWMAPEVINNKNKG-YGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPIPDS-LSKDAQDFIKQCVQVNPNDRPTAAQLLDHPFVKR 323
            GT +WMAPEVI   ++G Y    D+WSLG T +E+   + P   M  M+AL+ I +   P +  +  S+  ++F+  C+Q  P DRPT+  LL H F++R
Sbjct:  184 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITSIELAERKPPLFNMNAMSALYHIAQNESPVLQSNHWSEYFRNFVDSCLQKIPQDRPTSDMLLKHRFLQR 283          
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: TAOK2_RAT (Serine/threonine-protein kinase TAO2 OS=Rattus norvegicus GN=Taok2 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.757e-13
Identity = 40/100 (40.00%), Postives = 57/100 (57.00%), Query Frame = 3
Query:   30 GTAFWMAPEVINNKNKG-YGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPIPDS-LSKDAQDFIKQCVQVNPNDRPTAAQLLDHPFVKR 323
            GT +WMAPEVI   ++G Y    D+WSLG T +E+   + P   M  M+AL+ I +   P +     S+  ++F+  C+Q  P DRPT+  LL H FV R
Sbjct:  184 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 283          
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: TAOK2_MOUSE (Serine/threonine-protein kinase TAO2 OS=Mus musculus GN=Taok2 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 7.757e-13
Identity = 40/100 (40.00%), Postives = 57/100 (57.00%), Query Frame = 3
Query:   30 GTAFWMAPEVINNKNKG-YGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPIPDS-LSKDAQDFIKQCVQVNPNDRPTAAQLLDHPFVKR 323
            GT +WMAPEVI   ++G Y    D+WSLG T +E+   + P   M  M+AL+ I +   P +     S+  ++F+  C+Q  P DRPT+  LL H FV R
Sbjct:  184 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 283          
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: TAOK3_RAT (Serine/threonine-protein kinase TAO3 OS=Rattus norvegicus GN=Taok3 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.013e-12
Identity = 39/100 (39.00%), Postives = 57/100 (57.00%), Query Frame = 3
Query:   30 GTAFWMAPEVINNKNKG-YGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPIPDSLSKDA-QDFIKQCVQVNPNDRPTAAQLLDHPFVKR 323
            GT +WMAPEVI   ++G Y    DIWSLG T +E+   + P   M  M+AL+ I +   P +      D+ + F+  C+   P +RP AA+LL H F++R
Sbjct:  180 GTPYWMAPEVILAMDEGQYDGKVDIWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSREWTDSFRRFVDYCLHKIPQERPAAAELLRHDFIRR 279          
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: TAOK2_HUMAN (Serine/threonine-protein kinase TAO2 OS=Homo sapiens GN=TAOK2 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.013e-12
Identity = 40/100 (40.00%), Postives = 57/100 (57.00%), Query Frame = 3
Query:   30 GTAFWMAPEVINNKNKG-YGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPIPDS-LSKDAQDFIKQCVQVNPNDRPTAAQLLDHPFVKR 323
            GT +WMAPEVI   ++G Y    D+WSLG T +E+   + P   M  M+AL+ I +   P +     S+  ++F+  C+Q  P DRPT+  LL H FV R
Sbjct:  184 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPVLQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 283          
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: NRK_HUMAN (Nik-related protein kinase OS=Homo sapiens GN=NRK PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.013e-12
Identity = 41/107 (38.32%), Postives = 61/107 (57.01%), Query Frame = 3
Query:   12 RVKSCRGTAFWMAPEVIN---NKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPIPDS-LSKDAQDFIKQCVQVNPNDRPTAAQLLDHPFVK 320
            R  S  GT +WMAPEVI+   +  + Y   +D+WS+G T +EM     P   ++ + ALF I R S P +  S  S+   +F+++C   N   RPT+A +L HPFV+
Sbjct:  208 RRNSFIGTPYWMAPEVIDCDEDPRRSYDYRSDVWSVGITAIEMAEGAPPLCNLQPLEALFVILRESAPTVKSSGWSRKFHNFMEKCTIKNFLFRPTSANMLQHPFVR 314          
The following BLAST results are available for this feature:
BLAST of CX288644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
PAK6_MOUSE5.939e-1339.22Serine/threonine-protein kinase PAK 6 OS=Mus muscu... [more]
M4K4_MOUSE5.939e-1341.58Mitogen-activated protein kinase kinase kinase kin... [more]
M4K3_MOUSE5.939e-1339.45Mitogen-activated protein kinase kinase kinase kin... [more]
TAOK3_PONAB7.757e-1339.00Serine/threonine-protein kinase TAO3 OS=Pongo abel... [more]
TAOK2_XENLA7.757e-1339.00Serine/threonine-protein kinase TAO2 OS=Xenopus la... [more]
TAOK2_RAT7.757e-1340.00Serine/threonine-protein kinase TAO2 OS=Rattus nor... [more]
TAOK2_MOUSE7.757e-1340.00Serine/threonine-protein kinase TAO2 OS=Mus muscul... [more]
TAOK3_RAT1.013e-1239.00Serine/threonine-protein kinase TAO3 OS=Rattus nor... [more]
TAOK2_HUMAN1.013e-1240.00Serine/threonine-protein kinase TAO2 OS=Homo sapie... [more]
NRK_HUMAN1.013e-1238.32Nik-related protein kinase OS=Homo sapiens GN=NRK ... [more]

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Properties
Property NameValue
Genbank descriptionC02002G04SK IF1 Citrus clementina cDNA clone C02002G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288644 ID=CX288644; Name=CX288644; organism=Citrus clementina; type=EST; length=566bp
AATTCGGCACGAGGGTAAAATCTTGCAGAGGGACTGCATTCTGGATGGCC
CCAGAGGTTATTAATAATAAGAACAAAGGTTATGGGCTTCCAGCTGATAT
ATGGAGCCTTGGCTGCACTGTGTTGGAGATGTTAACCAGTCAAATTCCGT
ATGCTCCTATGGAATGTATGGCGGCATTGTTCAAGATTGGAAGGGGTTCG
CCACCACCTATTCCTGATAGTCTCTCAAAAGATGCTCAGGATTTTATCAA
GCAATGTGTACAAGTTAATCCAAATGATCGTCCCACTGCAGCTCAGCTCT
TAGACCACCCATTTGTTAAGAGACTACTTGCCACAAACTCAGGCTCAGCA
TCTCCTTATCTAGGTAGACGGTGAGGTACATATCAATTGTTAAATTACAT
TTCAGTACTTTTCCTGTTGCTGTGCTCTCCTTAACACTGGAAAGAAGAGC
TAAAACTGTGGGCGTGAATGCTTCTATTTAATACAATTAGCCTCTCTGTG
CTCCATCAGTCTCCACAGTGAGTCACACGAATTCTTCTACCATGCTTTAA
TTTTATGTTCAATGCA
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