CX288644

Overview
NameCX288644
Unique NameCX288644
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length566
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: STK4_CHICK (Serine/threonine-protein kinase 4 OS=Gallus gallus GN=STK4 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 8.009e-18
Identity = 49/99 (49.49%), Postives = 58/99 (58.59%), Query Frame = 3
Query:   30 GTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPI--PDSLSKDAQDFIKQCVQVNPNDRPTAAQLLDHPFVK 320
            GT FWMAP VI  +  GY   ADIWSLG T +EM   + PYA +  M A+F I    PP    P+  S    DF+KQC+  +P  R TA QLL HPFVK
Sbjct:  185 GTPFWMAPGVI--QEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDAFTDFVKQCLVKSPEQRATAIQLLQHPFVK 281          
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: Y0146_DICDI (Probable serine/threonine-protein kinase DDB_G0270146 OS=Dictyostelium discoideum GN=DDB_G0270146 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.046e-17
Identity = 39/98 (39.80%), Postives = 65/98 (66.33%), Query Frame = 3
Query:   30 GTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPIPDSLSKDAQDFIKQCVQVNPNDRPTAAQLLDHPFVKR 323
            GT +WMAPEVI  +  G+   +DIWSLGCT++E+ TS  PY  +  + A+++I +   PP+PD +S +  +F+++C   +  +R TA +LL HP++ +
Sbjct:  236 GTPYWMAPEVI--EISGHCQVSDIWSLGCTIIELFTSYPPYFDLNPLGAMYRICQDDRPPLPDDISSELANFLERCFCKSTEERATAKELLSHPWITK 331          
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: STK10_MOUSE (Serine/threonine-protein kinase 10 OS=Mus musculus GN=Stk10 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.046e-17
Identity = 46/109 (42.20%), Postives = 64/109 (58.72%), Query Frame = 3
Query:   30 GTAFWMAPEVI---NNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPI--PDSLSKDAQDFIKQCVQVNPNDRPTAAQLLDHPFVKRLLATNS 341
            GT +WMAPEV+     K+  Y   ADIWSLG T++EM   + P+  +  M  L KI +  PP +  P   S + +DF+K  +  NP  RP+AAQLL HPFV R+ +  +
Sbjct:  194 GTPYWMAPEVVLCETMKDAPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLQHPFVSRVTSNKA 302          
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: STK24_HUMAN (Serine/threonine-protein kinase 24 OS=Homo sapiens GN=STK24 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.330e-17
Identity = 42/98 (42.86%), Postives = 60/98 (61.22%), Query Frame = 3
Query:   30 GTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPIPDSLSKDAQDFIKQCVQVNPNDRPTAAQLLDHPFVKR 323
            GT FWMAPEVI  K   Y   ADIWSLG T +E+   + P++ +  M  LF I + +PP +  + SK  ++F++ C+   P+ RPTA +LL H F+ R
Sbjct:  193 GTPFWMAPEVI--KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILR 288          
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: STK10_HUMAN (Serine/threonine-protein kinase 10 OS=Homo sapiens GN=STK10 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.330e-17
Identity = 45/109 (41.28%), Postives = 64/109 (58.72%), Query Frame = 3
Query:   30 GTAFWMAPEVI---NNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPI--PDSLSKDAQDFIKQCVQVNPNDRPTAAQLLDHPFVKRLLATNS 341
            GT +WMAPEV+     K+  Y   ADIWSLG T++EM   + P+  +  M  L KI +  PP +  P   S + +DF+K  +  NP  RP+AAQLL+HPFV  + +  +
Sbjct:  194 GTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKA 302          
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: HIPPO_DROME (Serine/threonine-protein kinase hippo OS=Drosophila melanogaster GN=hpo PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.330e-17
Identity = 46/99 (46.46%), Postives = 60/99 (60.61%), Query Frame = 3
Query:   30 GTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPI--PDSLSKDAQDFIKQCVQVNPNDRPTAAQLLDHPFVK 320
            GT FWMAPEVI  +  GY   ADIWSLG T LEM   + PY  +  M A+F I +  PP    PD  S +  DF+ +C+   P+DR TA +LL+H F++
Sbjct:  198 GTPFWMAPEVI--EEIGYDCVADIWSLGITALEMAEGKPPYGEIHPMRAIFMIPQKPPPSFREPDRWSTEFIDFVSKCLVKEPDDRATATELLEHEFIR 294          
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: DST2_DICDI (Serine/threonine-protein kinase dst2 OS=Dictyostelium discoideum GN=dst2 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.330e-17
Identity = 45/100 (45.00%), Postives = 64/100 (64.00%), Query Frame = 3
Query:   30 GTAFWMAPEVINNKNKG--YGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPIP--DSLSKDAQDFIKQCVQVNPNDRPTAAQLLDHPFV 317
            GT +WMAPEVI N++    Y   ADIWSLG T++E+  ++ P + +  M  LF+I    PP +   ++ SKD  +FI+ C+Q +PN R TA +LL HPFV
Sbjct:  177 GTPYWMAPEVIENRSNPVPYDTKADIWSLGITLIELAEAEPPLSEIHPMKVLFQIPYRDPPKLKNQENYSKDFINFIQSCLQKDPNQRKTATELLKHPFV 276          
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: STK24_MOUSE (Serine/threonine-protein kinase 24 OS=Mus musculus GN=Stk24 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.043e-17
Identity = 42/98 (42.86%), Postives = 60/98 (61.22%), Query Frame = 3
Query:   30 GTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPIPDSLSKDAQDFIKQCVQVNPNDRPTAAQLLDHPFVKR 323
            GT FWMAPEVI  K   Y   ADIWSLG T +E+   + P++ +  M  LF I + +PP +  + SK  ++F++ C+   P+ RPTA +LL H F+ R
Sbjct:  181 GTPFWMAPEVI--KQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIIR 276          
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: STK25_HUMAN (Serine/threonine-protein kinase 25 OS=Homo sapiens GN=STK25 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.975e-17
Identity = 43/98 (43.88%), Postives = 58/98 (59.18%), Query Frame = 3
Query:   30 GTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPIPDSLSKDAQDFIKQCVQVNPNDRPTAAQLLDHPFVKR 323
            GT FWMAPEVI  K   Y   ADIWSLG T +E+   + P + +  M  LF I + SPP +    SK  ++F++ C+  +P  RPTA +LL H F+ R
Sbjct:  177 GTPFWMAPEVI--KQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKELLKHKFITR 272          
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: Y4251_DICDI (Probable serine/threonine-protein kinase DDB_G0284251 OS=Dictyostelium discoideum GN=DDB_G0284251 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.191e-17
Identity = 42/94 (44.68%), Postives = 59/94 (62.77%), Query Frame = 3
Query:   30 GTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPIPDSLSKDAQDFIKQCVQVNPNDRPTAAQLLDHP 311
            GT +WMAPE I  +  G    +DIWSLG T++E+LT   PY  ++ MAA+F+I     PP P  +SK+  D+ +Q  + +P  RPTA +LL HP
Sbjct:  195 GTPYWMAPESI--EISGCSSASDIWSLGSTMIELLTGNPPYYTLQPMAAMFRIVSDQHPPFPTDISKEFLDYFQQSFKKDPTQRPTAQELLQHP 286          
The following BLAST results are available for this feature:
BLAST of CX288644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
STK4_CHICK8.009e-1849.49Serine/threonine-protein kinase 4 OS=Gallus gallus... [more]
Y0146_DICDI1.046e-1739.80Probable serine/threonine-protein kinase DDB_G0270... [more]
STK10_MOUSE1.046e-1742.20Serine/threonine-protein kinase 10 OS=Mus musculus... [more]
STK24_HUMAN2.330e-1742.86Serine/threonine-protein kinase 24 OS=Homo sapiens... [more]
STK10_HUMAN2.330e-1741.28Serine/threonine-protein kinase 10 OS=Homo sapiens... [more]
HIPPO_DROME2.330e-1746.46Serine/threonine-protein kinase hippo OS=Drosophil... [more]
DST2_DICDI2.330e-1745.00Serine/threonine-protein kinase dst2 OS=Dictyostel... [more]
STK24_MOUSE3.043e-1742.86Serine/threonine-protein kinase 24 OS=Mus musculus... [more]
STK25_HUMAN3.975e-1743.88Serine/threonine-protein kinase 25 OS=Homo sapiens... [more]
Y4251_DICDI5.191e-1744.68Probable serine/threonine-protein kinase DDB_G0284... [more]

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Properties
Property NameValue
Genbank descriptionC02002G04SK IF1 Citrus clementina cDNA clone C02002G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288644 ID=CX288644; Name=CX288644; organism=Citrus clementina; type=EST; length=566bp
AATTCGGCACGAGGGTAAAATCTTGCAGAGGGACTGCATTCTGGATGGCC
CCAGAGGTTATTAATAATAAGAACAAAGGTTATGGGCTTCCAGCTGATAT
ATGGAGCCTTGGCTGCACTGTGTTGGAGATGTTAACCAGTCAAATTCCGT
ATGCTCCTATGGAATGTATGGCGGCATTGTTCAAGATTGGAAGGGGTTCG
CCACCACCTATTCCTGATAGTCTCTCAAAAGATGCTCAGGATTTTATCAA
GCAATGTGTACAAGTTAATCCAAATGATCGTCCCACTGCAGCTCAGCTCT
TAGACCACCCATTTGTTAAGAGACTACTTGCCACAAACTCAGGCTCAGCA
TCTCCTTATCTAGGTAGACGGTGAGGTACATATCAATTGTTAAATTACAT
TTCAGTACTTTTCCTGTTGCTGTGCTCTCCTTAACACTGGAAAGAAGAGC
TAAAACTGTGGGCGTGAATGCTTCTATTTAATACAATTAGCCTCTCTGTG
CTCCATCAGTCTCCACAGTGAGTCACACGAATTCTTCTACCATGCTTTAA
TTTTATGTTCAATGCA
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