CX288647

Overview
NameCX288647
Unique NameCX288647
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length559
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14735 contig Ccv1_Contig14735:178..736. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER2_ORYSI (Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2)

HSP 1 Score: 183.341 bits (464), Expect = 6.773e-46
Identity = 99/182 (54.40%), Postives = 120/182 (65.93%), Query Frame = 2
Query:    8 AFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR 553
            A +S+ R+GASL+RLHFHDCFV GCDAS+LL        E+ A PN  S RGF V+DN+K  VE  C + VSCADIL +AA  SV   GGPSW V LGRRDS TAN + AN +LP P  +L EL  +F   GL D  D+VALSGAHT G+AQCQ FR RLY+  N       +D++F   L+
Sbjct:   48 AVNSEPRMGASLVRLHFHDCFVQGCDASVLLSG-----QEQNAGPNAGSLRGFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGL-DVTDMVALSGAHTIGQAQCQNFRDRLYNETN-------IDSSFATALK 216          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 4.390e-45
Identity = 95/183 (51.91%), Postives = 124/183 (67.76%), Query Frame = 2
Query:   11 FSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKL 559
            F SD  +   ++R+HFHDCFV GCD SIL++ +   D+E+ A PN N  +GF+VI++ K  +E  CP VVSCADIL +AA  SV  + G +W+VP GRRD R +  A A  +LP  FD++D  K  F   GLN + DLVAL+GAHT G A C   R RL++FN+TG PDP++DATFL QLR L
Sbjct:   56 FQSDPTVAPGILRMHFHDCFVLGCDGSILIEGS---DAERTAIPNRN-LKGFDVIEDAKTQIEAICPGVVSCADILALAARDSVVATRGLTWSVPTGRRDGRVSRAADAG-DLPAFFDSVDIQKRKFLTKGLNTQ-DLVALTGAHTIGTAGCAVIRDRLFNFNSTGGPDPSIDATFLPQLRAL 232          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 7.488e-45
Identity = 92/181 (50.83%), Postives = 124/181 (68.51%), Query Frame = 2
Query:   20 DIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLY-DFNNTGKPDPTLDATFLQQLRKL 559
            D R  A +IRLHFHDCFV GCD S+LLD T T+  EK A+PN NS +G++++D +K  +E  CP VVSCAD+LTI A  +  L GGP W VP+GR+DS+TA+  LA  NLP P + L  + + F + GL+ + D+VAL GAHT G+AQC+ FR R+Y DF  T   +P +  T+L  LR++
Sbjct:   57 DPRNAAIIIRLHFHDCFVQGCDGSVLLDETETLQGEKKASPNINSLKGYKIVDRIKNIIESECPGVVSCADLLTIGARDATILVGGPYWDVPVGRKDSKTASYELATTNLPTPEEGLISIIAKFYSQGLSVE-DMVALIGAHTIGKAQCRNFRSRIYGDFQVTSALNP-VSETYLASLREI 235          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.277e-44
Identity = 91/184 (49.46%), Postives = 117/184 (63.59%), Query Frame = 2
Query:    2 KKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR 553
            +K F  D  +   L+R+HFHDCFV GCD S+L+DST +  +EK +  NN S RGFEVID+ KA +E  C  VVSCADI+  AA  SV ++GG  + VP GRRD R +  + A+ NLP P  T+D+L   F N GL    ++V LSGAHT GR+ C  F  RLY+FN T   DPTLD  +   L+
Sbjct:   82 RKGFIRDSGVAPGLVRMHFHDCFVRGCDGSVLIDSTPSNTAEKDSPANNPSLRGFEVIDSAKARLEAVCKGVVSCADIVAFAARDSVEITGGLGYDVPAGRRDGRISLASEASTNLPPPTFTVDQLTQFFSNKGLTQD-EMVTLSGAHTIGRSHCSSFSNRLYNFNGTSGQDPTLDPQYAASLK 264          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER1_WHEAT (Peroxidase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.179e-44
Identity = 94/161 (58.39%), Postives = 114/161 (70.81%), Query Frame = 2
Query:    8 AFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLY 490
            A SSD R+GASL+RLHFHDCF  GCDAS+LL        E+ A PN  S RGF VIDN+K  +E  C + VSCADILT+AA  SV   GGPSW VPLGRRDS TA+ +LAN +LPGP  +  +L+++F    LN  +D+VALSGAHT G+AQC  FR R+Y
Sbjct:   48 AVSSDPRMGASLLRLHFHDCF--GCDASVLLTGM-----EQNAGPNVGSLRGFGVIDNIKTQLESVCKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSTTASASLANSDLPGPSSSRSQLEAAFLKKNLN-TVDMVALSGAHTIGKAQCSNFRTRIY 200          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 2.846e-44
Identity = 92/164 (56.10%), Postives = 119/164 (72.56%), Query Frame = 2
Query:    2 KKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYD 493
            + A S + R+ ASLIRLHFHDCFV+GCDAS++L +T T++SE+ +  N  SARGFEVID  K+AVE  CP VVSCADI+ +AA  +    GGP + V +GRRDS  A RA+A+++LP    +L++L   F   GLN + DLVALSGAHT G+AQC  F+GRLYD
Sbjct:   42 RTAISRERRMAASLIRLHFHDCFVNGCDASVMLVATPTMESERDSLANFQSARGFEVIDQAKSAVESVCPGVVSCADIIAVAARDASEYVGGPRYDVKVGRRDSTNAFRAIADRDLPNFRASLNDLSELFLRKGLNTR-DLVALSGAHTLGQAQCLTFKGRLYD 204          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER64_ARATH (Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 6.339e-44
Identity = 93/183 (50.82%), Postives = 122/183 (66.67%), Query Frame = 2
Query:    2 KKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQL 550
            KKA S+D  + A+L+R+HFHDCFV GCD S+LLDS     +EK   PN  S   F VIDN K A+E  CP +VSCADIL++AA  +VALSGGP+WAVP GR+D R  ++A+  + LP P   + +L+ +F   GL+   DLVALSG HT G A C  F+ RL+ FN   + DPTL+ +F  +L
Sbjct:   44 KKAMSNDQTVPAALLRMHFHDCFVRGCDGSVLLDSKGKNKAEKDGPPNI-SLHAFYVIDNAKKALEEQCPGIVSCADILSLAARDAVALSGGPTWAVPKGRKDGR-ISKAIETRQLPAPTFNISQLRQNFGQRGLS-MHDLVALSGGHTLGFAHCSSFQNRLHKFNTQKEVDPTLNPSFAARL 223          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.412e-43
Identity = 99/182 (54.40%), Postives = 119/182 (65.38%), Query Frame = 2
Query:   11 FSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGK-PDPTLDATFLQQLR 553
            FSSD RI   ++R+HFHDCFV GCD SIL+   NT   E+ A PN N  +GFEVIDN K  +E ACP VVSCADIL +AA  +V L+ G  W VP GRRD R +  + AN NLPGP D++   +  F  +GLN + DLV L G HT G A C  FR RL  FN TG+  DPT+D TFL QL+
Sbjct:   59 FSSDPRIAPGILRMHFHDCFVQGCDGSILISGANT---ERTAGPNLN-LQGFEVIDNAKTQLEAACPGVVSCADILALAARDTVILTQGTGWQVPTGRRDGRVSLASNAN-NLPGPRDSVAVQQQKFSALGLNTR-DLVVLVGGHTIGTAGCGVFRNRL--FNTTGQTADPTIDPTFLAQLQ 232          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.412e-43
Identity = 95/182 (52.20%), Postives = 118/182 (64.84%), Query Frame = 2
Query:    8 AFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR 553
            A +SD R+GASL+RLHFHDCFV GCDAS+LL        E+ A PN  S RGF VID++K  +E  C + VSCADILT+AA  SV   GGPSW VPLGRRDS  AN   AN +LPG   +  EL+++F   G  + +D+VALSGAHT G+AQC  FR R+Y        D  ++A +   LR
Sbjct:   46 AVTSDPRMGASLLRLHFHDCFVQGCDASVLLSGM-----EQNAIPNAGSLRGFGVIDSIKTQIEAICKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSIDANENEANTDLPGFNSSRAELEAAFLKKGGLNTVDMVALSGAHTIGQAQCSTFRARIYG------GDTNINAAYAASLR 216          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER57_ARATH (Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.409e-43
Identity = 91/184 (49.46%), Postives = 120/184 (65.22%), Query Frame = 2
Query:    2 KKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR 553
            ++ F     + A+L+R+HFHDCFV GCDAS+L+DSTN   SEK A PN  S R F++ID +KA +E ACP  VSCADI+T+A   SVAL+GGPS+++P GRRD R +N    +  LPGP  ++    S F N G+N   D VAL GAHT G+  C  F  R+  F  TG+PDP++D   +  LR
Sbjct:   45 RQRFGVTPTVTAALLRMHFHDCFVKGCDASLLIDSTN---SEKTAGPNG-SVREFDLIDRIKAQLEAACPSTVSCADIVTLATRDSVALAGGPSYSIPTGRRDGRVSNN--LDVTLPGPTISVSGAVSLFTNKGMN-TFDAVALLGAHTVGQGNCGLFSDRITSFQGTGRPDPSMDPALVTSLR 221          
The following BLAST results are available for this feature:
BLAST of CX288647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER2_ORYSI6.773e-4654.40Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX1... [more]
PERN1_TOBAC4.390e-4551.91Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]
PER11_ARATH7.488e-4550.83Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]
PER5_VITVI1.277e-4449.46Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]
PER1_WHEAT2.179e-4458.39Peroxidase OS=Triticum aestivum PE=2 SV=1[more]
PER4_ARATH2.846e-4456.10Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PER64_ARATH6.339e-4450.82Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=... [more]
PER71_ARATH1.412e-4354.40Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=... [more]
PER1_HORVU1.412e-4352.20Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PER57_ARATH2.409e-4349.46Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC02002G07SK IF1 Citrus clementina cDNA clone C02002G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288647 ID=CX288647; Name=CX288647; organism=Citrus clementina; type=EST; length=559bp
TAAGAAAGCTTTCTCGTCCGATATCCGGATCGGTGCCAGCCTCATCAGGC
TTCATTTCCATGACTGTTTTGTTGATGGGTGTGATGCATCGATTTTGCTG
GACAGCACTAACACCATAGACAGCGAGAAATTTGCTGCGCCAAATAACAA
TTCGGCGAGGGGTTTTGAAGTTATTGATAACATGAAAGCTGCCGTTGAAA
GGGCATGTCCAAGGGTTGTTTCCTGCGCTGATATTCTTACTATTGCGGCT
GAACGATCCGTTGCTTTGTCAGGGGGTCCGTCATGGGCAGTTCCATTGGG
AAGAAGAGACAGCAGAACGGCAAACAGAGCTCTTGCAAATCAGAATCTTC
CAGGACCATTTGATACTCTTGATGAGCTCAAATCTAGTTTTAGAAATGTT
GGCCTCAATGACAAGCTTGATCTTGTTGCACTCTCCGGAGCACACACGTT
CGGAAGGGCTCAGTGCCAATTTTTCAGGGGCAGATTATACGATTTTAACA
ACACTGGCAAGCCAGACCCAACCCTAGACGCAACCTTCTTACAACAACTG
AGGAAACTA
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