CX288647

Overview
NameCX288647
Unique NameCX288647
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length559
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14735 contig Ccv1_Contig14735:178..736. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.409e-43
Identity = 93/184 (50.54%), Postives = 121/184 (65.76%), Query Frame = 2
Query:    2 KKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR 553
            ++ F+ D  I A+L R+HFHDCFV GCDAS+L+D T +  SEK A PN  S RGFE+ID +K A+E  CP  VSC+DI+T+A   +V L GGPS+ VP GRRD   +N   AN+ LP PF +++ + S F N G+N   D VAL GAHT G A C  F  R+ +F  TG PDP++D T   +LR
Sbjct:   44 RQQFARDPSITAALTRMHFHDCFVQGCDASLLIDPTTSQLSEKNAGPNF-SVRGFELIDEIKTALEAQCPSTVSCSDIVTLATRDAVFLGGGPSYVVPTGRRDGFVSNPEDANEILPPPFISVEGMLSFFGNKGMN-VFDSVALLGAHTVGIASCGNFVDRVTNFQGTGLPDPSMDPTLAGRLR 225          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER25_ARATH (Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 2.409e-43
Identity = 96/183 (52.46%), Postives = 116/183 (63.39%), Query Frame = 2
Query:   11 FSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKL 559
            F SD  I   L+RLHFHDCFV GCD S+L+   +   +E+ A PN    RG EVID+ KA +E  CP VVSCADIL +AA  SV LS GPSW VP GR+D R  + A    NLP P D++   K  F++ GL D  DLV L GAHT G+  C FFR RLY+F  TG  DPT+  +FL QL+ L
Sbjct:   53 FDSDPTISPGLLRLHFHDCFVQGCDGSVLIKGKS---AEQAALPNLG-LRGLEVIDDAKARLEAVCPGVVSCADILALAARDSVDLSDGPSWRVPTGRKDGR-ISLATEASNLPSPLDSVAVQKQKFQDKGL-DTHDLVTLLGAHTIGQTDCLFFRYRLYNFTVTGNSDPTISPSFLTQLKTL 229          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 4.109e-43
Identity = 85/175 (48.57%), Postives = 114/175 (65.14%), Query Frame = 2
Query:   29 IGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR 553
            + A LIR+HFHDCFV GCD SIL+++T++    +  AP N + RGF+ ID +K+A+E  CP +VSCADI+T+A   S+   GGP+W VP GRRD R +N A A  N+P PF     L + F N GL+ K DLV LSGAHT G + C  F  RL++F   G  DP+LD+ +   L+
Sbjct:   55 LAAGLIRMHFHDCFVRGCDGSILINATSSNQQVEKLAPPNLTVRGFDFIDKVKSALESKCPGIVSCADIITLATRDSIVAIGGPTWNVPTGRRDGRISNFAEAMNNIPPPFGNFTTLITLFGNQGLDVK-DLVLLSGAHTIGVSHCSSFSNRLFNFTGVGDQDPSLDSEYADNLK 228          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 9.154e-43
Identity = 91/182 (50.00%), Postives = 116/182 (63.74%), Query Frame = 2
Query:   14 SSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKL 559
            +SD  + A ++R+HFHDCFV GCD SIL+    T +   FA   N   RG+E+ID+ K  +E ACP VVSCADIL +AA  SV LSGG SW VP GRRD R  ++A    NLP P D++D  K  F   GLN + DLV L G HT G ++CQFF  RL++FN T   DP +D +F+  L+ L
Sbjct:   57 NSDPTLAAKILRMHFHDCFVQGCDGSILISGPAT-EKTAFA---NLGLRGYEIIDDAKTQLEAACPGVVSCADILALAARDSVVLSGGLSWQVPTGRRDGR-VSQASDVSNLPAPSDSVDVQKQKFAAKGLNTQ-DLVTLVGGHTIGTSECQFFSNRLFNFNGTAAADPAIDPSFVSNLQAL 232          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 9.154e-43
Identity = 89/176 (50.57%), Postives = 113/176 (64.20%), Query Frame = 2
Query:   29 IGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRK 556
            +GA L+R+ FHDCFV GCD S+LLD  N    EK A PN  S RGF +ID+ KAA+E+ CP +VSC+DIL + A  ++    GPSW V  GRRD R +N  +   NLP PFD + +L S FR+ GLN+K DLV LSG HT G   C     RLY+F   G  DP+LD+ +  +LRK
Sbjct:   56 LGAPLLRMFFHDCFVRGCDGSVLLDKPNN-QGEKSAVPNL-SLRGFGIIDDSKAALEKVCPGIVSCSDILALVARDAMVALEGPSWEVETGRRDGRVSN--INEVNLPSPFDNITKLISDFRSKGLNEK-DLVILSGGHTIGMGHCPLLTNRLYNFTGKGDSDPSLDSEYAAKLRK 226          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.663e-42
Identity = 93/164 (56.71%), Postives = 113/164 (68.90%), Query Frame = 2
Query:    8 AFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFN 499
            A   D R+ ASL+RL FHDCFV GCDAS+LLD+   + SEK A PN NS RGFEVID +K  +E ACP  VSC+DIL +AA  SV L GGP W V LGRRDS  A+ A ANQ +P P  +LD L  +F+  GLN + DL+ALSGAHT G+A+C  F+ R+   N
Sbjct:   53 AVLKDPRMAASLLRLQFHDCFVLGCDASVLLDTHGDMLSEKQATPNLNSLRGFEVIDYIKYLLEEACPLTVSCSDILALAARDSVFLRGGPWWEVLLGRRDSLKASFAGANQFIPAPNSSLDSLIINFKQQGLNIQ-DLIALSGAHTIGKARCVSFKQRIVQPN 215          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.663e-42
Identity = 84/176 (47.73%), Postives = 116/176 (65.91%), Query Frame = 2
Query:   29 IGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRK 556
            + A L+R+HFHDCFV GCD S+LL S    D+E+ A PN  + +G+EV+D  K A+ER CP ++SCAD+L + A  +VA+ GGP W VPLGRRD R +    A  NLP PF  +  LK +F N GLN K DLV LSG HT G + C     RLY+F   G  DP+++ +++++L++
Sbjct:   56 LAAKLLRMHFHDCFVRGCDGSVLLKSAKN-DAERDAVPNL-TLKGYEVVDAAKTALERKCPNLISCADVLALVARDAVAVIGGPWWPVPLGRRDGRISKLNDALLNLPSPFADIKTLKKNFANKGLNAK-DLVVLSGGHTIGISSCALVNSRLYNFTGKGDSDPSMNPSYVRELKR 228          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 5.933e-42
Identity = 83/175 (47.43%), Postives = 115/175 (65.71%), Query Frame = 2
Query:   29 IGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR 553
            + A LIR+HFHDCFV GCD S+L++ST+   + +  AP N + RGF  ++ +KA +E+ CP+ VSCADI+ + A  +V  +GGPSW+VP GRRD R +N+  A  N+P P      L+  F+N GLN K DLV LSGAHT G + C     RLY+F+ T K DP+LD+ +   L+
Sbjct:   59 LAAPLIRMHFHDCFVRGCDGSVLINSTS--GNAERDAPPNLTLRGFGFVERIKALLEKVCPKTVSCADIIALTARDAVVATGGPSWSVPTGRRDGRISNKTEATNNIPPPTSNFTTLQRLFKNQGLNLK-DLVLLSGAHTIGVSHCSSMNTRLYNFSTTVKQDPSLDSQYAANLK 230          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 7.749e-42
Identity = 87/186 (46.77%), Postives = 124/186 (66.67%), Query Frame = 2
Query:    2 KKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKL 559
            KKA   + R  AS++R  FHDCFV+GCDAS+LLD T  +  EK +  N +S R FEV+D++K A+E+ACP  VSCADI+ +AA  +VAL+GGP W V LGR+DS TA++  ++  +P P      L   F    L+ K D+VALSG+H+ G+ +C     RLY+ + +GKPDP L+ ++ ++L KL
Sbjct:   44 KKAMIKEARSVASVMRFQFHDCFVNGCDASLLLDDTPNMLGEKLSLSNIDSLRSFEVVDDIKEALEKACPATVSCADIVIMAARDAVALTGGPDWEVKLGRKDSLTASQQDSDDIMPSPRANATFLIDLFERFNLSVK-DMVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPALEPSYRKKLDKL 228          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.012e-41
Identity = 90/167 (53.89%), Postives = 114/167 (68.26%), Query Frame = 2
Query:   41 LIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFL 541
            ++R+HFHDCFV GCD S+LL + NT  SE+ A PN  S RGFEVI+  KA +E+ACPR VSCADILT+AA  +V L+GG  W VPLGR D R +    ++ NLPGP D++ + K  F    LN  LDLV L G HT G A C   RGR  +FN TG+PDP++D +F+
Sbjct:   71 ILRMHFHDCFVHGCDGSVLL-AGNT--SERTAVPNR-SLRGFEVIEEAKARLEKACPRTVSCADILTLAARDAVVLTGGQRWEVPLGRLDGRISQ--ASDVNLPGPSDSVAKQKQDFAAKTLN-TLDLVTLVGGHTIGTAGCGLVRGRFVNFNGTGQPDPSIDPSFV 230          
The following BLAST results are available for this feature:
BLAST of CX288647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER28_ARATH2.409e-4350.54Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER25_ARATH2.409e-4352.46Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=... [more]
PER39_ARATH4.109e-4348.57Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER2_ARAHY9.154e-4350.00Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]
PER27_ARATH9.154e-4350.57Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=... [more]
PER20_ARATH2.663e-4256.71Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]
PER1_ARATH2.663e-4247.73Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER30_ARATH5.933e-4247.43Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=... [more]
PER17_ARATH7.749e-4246.77Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PER69_ARATH1.012e-4153.89Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC02002G07SK IF1 Citrus clementina cDNA clone C02002G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288647 ID=CX288647; Name=CX288647; organism=Citrus clementina; type=EST; length=559bp
TAAGAAAGCTTTCTCGTCCGATATCCGGATCGGTGCCAGCCTCATCAGGC
TTCATTTCCATGACTGTTTTGTTGATGGGTGTGATGCATCGATTTTGCTG
GACAGCACTAACACCATAGACAGCGAGAAATTTGCTGCGCCAAATAACAA
TTCGGCGAGGGGTTTTGAAGTTATTGATAACATGAAAGCTGCCGTTGAAA
GGGCATGTCCAAGGGTTGTTTCCTGCGCTGATATTCTTACTATTGCGGCT
GAACGATCCGTTGCTTTGTCAGGGGGTCCGTCATGGGCAGTTCCATTGGG
AAGAAGAGACAGCAGAACGGCAAACAGAGCTCTTGCAAATCAGAATCTTC
CAGGACCATTTGATACTCTTGATGAGCTCAAATCTAGTTTTAGAAATGTT
GGCCTCAATGACAAGCTTGATCTTGTTGCACTCTCCGGAGCACACACGTT
CGGAAGGGCTCAGTGCCAATTTTTCAGGGGCAGATTATACGATTTTAACA
ACACTGGCAAGCCAGACCCAACCCTAGACGCAACCTTCTTACAACAACTG
AGGAAACTA
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