CX288647

Overview
NameCX288647
Unique NameCX288647
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length559
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14735 contig Ccv1_Contig14735:178..736. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.565e-34
Identity = 81/155 (52.26%), Postives = 100/155 (64.52%), Query Frame = 2
Query:    8 AFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTN-TIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRV-VSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQC 466
            A  ++ R+GASLIRLHFHDCFVDGCD  ILLD  N T   E+ + PNNNS RGFEVI   K +V  +CP + VSCADIL IAA  S+A  GG ++ V LGR D+ TAN + A   LP P D L      F +     + ++VAL+GAHT G A+C
Sbjct:   92 AIDNETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNNNSVRGFEVIAQAKQSVVDSCPNISVSCADILAIAARDSLAKLGGQTYTVALGRSDATTANFSGAINQLPAPSDNLTVQIQKFSDKNFTVR-EMVALAGAHTVGFARC 245          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER7_ARATH (Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.487e-34
Identity = 79/180 (43.89%), Postives = 113/180 (62.78%), Query Frame = 2
Query:   17 SDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRK 556
            SD  +G +L+RL FHDC V GCDAS+LLD   T    +  +P + + RGFE+ID++K+ +E++CP  VSCADILT A+  +    GGP W    GRRDS+  + A   + +P     +  L  +F++ GLN  LDLV LSGAHT G+A C   + RLY++N T   DP++DA +   L++
Sbjct:   77 SDSSLGPALLRLIFHDCGVTGCDASVLLDYEGT----ERRSPASKTLRGFELIDDIKSEMEKSCPGKVSCADILTSASRAATVQLGGPYWPNVYGRRDSK-HSYARDVEKVPSGRRDVTALLETFQSYGLN-VLDLVVLSGAHTIGKASCGTIQSRLYNYNATSGSDPSIDAKYADYLQR 250          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 2.952e-33
Identity = 89/185 (48.11%), Postives = 114/185 (61.62%), Query Frame = 2
Query:    2 KKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALS-GAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR 553
            ++A ++D    A L+RL FHDCFV+GCD SIL+      D E+FAA N   A GF+VID  K+ +ER CP VVSCADI+ +AA  ++A + GP + VP GRRD   AN   A +NLP   D+++ LKS FR  GL+D+ DLV LS GAHT G   C F   RL         DPT++  F Q LR
Sbjct:   45 QQAVTNDPGKAAVLLRLQFHDCFVEGCDGSILIKHGGN-DDERFAAGNAGVA-GFDVIDEAKSELERFCPGVVSCADIVALAARDAIAEAKGPFYEVPTGRRDGLIANVDHA-KNLPDVQDSINTLKSKFREKGLSDQ-DLVLLSAGAHTIGTTACFFVIPRL------DAQDPTINPEFFQILR 219          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 6.575e-33
Identity = 77/173 (44.51%), Postives = 108/173 (62.43%), Query Frame = 2
Query:   44 IRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSAR-GFEVIDNMKAAVERA--CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR 553
            +RL+FHDCFV+GCDAS+++ STNT  +EK    N + A  GF+ +   K AV+    C   VSCADILT+A    V L+GGP +AV LGRRD  +++ +     LP P   L++L + F   GL+   D++ALSGAHT G A C     RLY+FN T   DPT++  ++ +L+
Sbjct:   62 LRLYFHDCFVNGCDASVMIASTNTNKAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVVNLAGGPQYAVELGRRDGLSSSASSVTGKLPKPTFDLNQLNALFAENGLSPN-DMIALSGAHTLGFAHCTKVFNRLYNFNKTNNVDPTINKDYVTELK 233          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PERA_IPOBA (Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 8.588e-33
Identity = 78/154 (50.65%), Postives = 99/154 (64.29%), Query Frame = 2
Query:    8 AFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRV-VSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQC 466
            A +++ R+GASLIRL FHDCFVDGCDA +LL+ T T   E+ AA NNNS RGF VI+  K  V+   P + VSCADIL+IAA  S     G ++ V LGR+D+RTAN   AN  L GP + L    + F   G N   ++VAL G+HT G A+C
Sbjct:   82 AINAEARMGASLIRLFFHDCFVDGCDAGLLLNDTATFTGEQTAAGNNNSVRGFAVIEQAKQNVKTQMPDMSVSCADILSIAARDSFEKFSGSTYTVTLGRKDARTANFTGANTQLVGPNENLTSQLTKFAAKGFNG-TEMVALLGSHTIGFARC 234          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.122e-32
Identity = 73/154 (47.40%), Postives = 96/154 (62.34%), Query Frame = 2
Query:    8 AFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRV-VSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQC 466
            A +++ R+GASLIRLHFHDCFVDGCD  ILL+ T     E+ A  N+NS RGF VID  K   +  C    VSCAD+L IAA  +       ++ + LGR+D+RTAN   AN  LP PFD L    + F + G N + ++V L+GAHT G ++C
Sbjct:   83 AITAETRMGASLIRLHFHDCFVDGCDGGILLNDTANFTGEQGAPANSNSVRGFSVIDQAKRNAQTKCADTPVSCADVLAIAARDAFRKFTNQTYNITLGRQDARTANLTGANTQLPAPFDNLSIQTAKFADKGFNQR-EMVVLAGAHTVGFSRC 235          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.913e-32
Identity = 78/181 (43.09%), Postives = 104/181 (57.46%), Query Frame = 2
Query:   11 FSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSAR-GFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQL 550
            F   +    + +R+ FHDCFV+GCDAS+ + S N  D+EK A  N + A  GF+ +   K AVE  CP VVSCADIL +AA   V L GGP + V LGRRD   +  +     LP P   +  L   F + GL+   D++ALSGAHT G + C  F  RL++F+     DPT+D  + QQL
Sbjct:   56 FKQTVTTAPATLRMFFHDCFVEGCDASVFIASENE-DAEKDADDNKSLAGDGFDTVIKAKTAVESQCPGVVSCADILALAARDVVVLVGGPEFKVELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLS-LTDMIALSGAHTIGSSHCNRFANRLHNFSTFMPVDPTMDPVYAQQL 234          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.913e-32
Identity = 80/175 (45.71%), Postives = 106/175 (60.57%), Query Frame = 2
Query:   44 IRLHFHDCFVDGCDASILLDSTNTIDSEKFA---APNNNSAR--GFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR 553
            IRL FHDCFV+GCD SIL+++     S+K A   A  N   R  GF+ I   KA VE  CP +VSC+DIL IAA   + L+GGP + V  GR D + +       N+P    T+D+L   F + GL  + +LV LSG+HT G A C+ F GRLYD+  T +PDP+LD   L++LR
Sbjct:   77 IRLFFHDCFVEGCDGSILIETKK--GSKKLAEREAYENKELREEGFDSIIKAKALVESHCPSLVSCSDILAIAARDFIHLAGGPYYQVKKGRWDGKRSTAKNVPPNIPRSNSTVDQLIKLFASKGLTVE-ELVVLSGSHTIGFAHCKNFLGRLYDYKGTKRPDPSLDQRLLKELR 248          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.499e-32
Identity = 75/161 (46.58%), Postives = 96/161 (59.63%), Query Frame = 2
Query:   11 FSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYD 493
            F SD  I A+ +R+ FHDCFV GCDAS+L+D      SEK   PN  S RG+E+ID  K  +E ACPR VSCADI+T+A   SVAL+GGP ++VP GRRD   +N    + NLPGP   +      F   G+N    +  + G H+ G A C  F+ RL D
Sbjct:   46 FRSDKSITAAFLRMQFHDCFVRGCDASLLIDPRPGRPSEKSTGPNA-SVRGYEIIDEAKRQLEAACPRTVSCADIVTLATRDSVALAGGPRFSVPTGRRDGLRSNP--NDVNLPGPTIPVSASIQLFAAQGMNTNDMVTLIGGGHSVGVAHCSLFQDRLSD 203          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.262e-32
Identity = 79/185 (42.70%), Postives = 105/185 (56.76%), Query Frame = 2
Query:    2 KKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLY--DFNNTGKPDPTLDATFLQQL 550
            + A SSD  I   L+RL FHDCFV GCDAS+L+   +T  S+    P N S  GF VID  K A+E  CP  VSCADI+ +AA  +V  +GGP   +P GRRD + +  A    N+     TLD++  +F + GL+ + DLV LSGAHT G + C  F GR       N    D +LD ++ + L
Sbjct:   50 RSATSSDPTIPGKLLRLFFHDCFVQGCDASVLIQGNSTEKSD----PGNASLGGFSVIDTAKNAIENLCPATVSCADIVALAARDAVEAAGGPVVEIPTGRRDGKESMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQ-DLVVLSGAHTIGASHCNAFNGRFQRDSKGNFEVIDASLDNSYAETL 229          
The following BLAST results are available for this feature:
BLAST of CX288647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER2_SOLLC1.565e-3452.26Suberization-associated anionic peroxidase 2 OS=So... [more]
PER7_ARATH3.487e-3443.89Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 ... [more]
PER13_ARATH2.952e-3348.11Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]
PER51_ARATH6.575e-3344.51Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PERA_IPOBA8.588e-3350.65Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PERN_IPOBA1.122e-3247.40Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER55_ARATH1.913e-3243.09Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER19_ARATH1.913e-3245.71Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=... [more]
PER44_ARATH2.499e-3246.58Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PER46_ARATH4.262e-3242.70Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC02002G07SK IF1 Citrus clementina cDNA clone C02002G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288647 ID=CX288647; Name=CX288647; organism=Citrus clementina; type=EST; length=559bp
TAAGAAAGCTTTCTCGTCCGATATCCGGATCGGTGCCAGCCTCATCAGGC
TTCATTTCCATGACTGTTTTGTTGATGGGTGTGATGCATCGATTTTGCTG
GACAGCACTAACACCATAGACAGCGAGAAATTTGCTGCGCCAAATAACAA
TTCGGCGAGGGGTTTTGAAGTTATTGATAACATGAAAGCTGCCGTTGAAA
GGGCATGTCCAAGGGTTGTTTCCTGCGCTGATATTCTTACTATTGCGGCT
GAACGATCCGTTGCTTTGTCAGGGGGTCCGTCATGGGCAGTTCCATTGGG
AAGAAGAGACAGCAGAACGGCAAACAGAGCTCTTGCAAATCAGAATCTTC
CAGGACCATTTGATACTCTTGATGAGCTCAAATCTAGTTTTAGAAATGTT
GGCCTCAATGACAAGCTTGATCTTGTTGCACTCTCCGGAGCACACACGTT
CGGAAGGGCTCAGTGCCAATTTTTCAGGGGCAGATTATACGATTTTAACA
ACACTGGCAAGCCAGACCCAACCCTAGACGCAACCTTCTTACAACAACTG
AGGAAACTA
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