CX288666

Overview
NameCX288666
Unique NameCX288666
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length342
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP72_USTMA (Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=UMS2 PE=3 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 1.025e-52
Identity = 101/110 (91.82%), Postives = 107/110 (97.27%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEEL 332
            LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNR+VNHFVQEFKRKNKKD++ N RALRRLRTACERAKRTLSS AQTTIEIDSL+EGIDFY++ITRARFEEL
Sbjct:  194 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKNKKDLTTNARALRRLRTACERAKRTLSSAAQTTIEIDSLFEGIDFYTSITRARFEEL 303          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP71_SCHPO (Probable heat shock protein ssa1 OS=Schizosaccharomyces pombe GN=ssa1 PE=1 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 2.982e-52
Identity = 100/113 (88.50%), Postives = 108/113 (95.58%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMD 341
            LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD+R+VNHF QEFKRKNKKDI+GN RA+RRLRTACERAKRTLSS+AQ +IEIDSLYEGIDFY++ITRARFEEL  D
Sbjct:  194 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFAQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEIDSLYEGIDFYTSITRARFEELCAD 306          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP72_SCHPO (Probable heat shock protein ssa2 OS=Schizosaccharomyces pombe GN=ssa2 PE=1 SV=3)

HSP 1 Score: 202.986 bits (515), Expect = 3.895e-52
Identity = 99/113 (87.61%), Postives = 109/113 (96.46%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMD 341
            LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD+R+VNHF+QEFKRKNKKDI+GN RA+RRLRTACERAKRTLSS+AQ +IEIDSL+EGIDFY++ITRARFEEL  D
Sbjct:  194 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFIQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEIDSLFEGIDFYTSITRARFEELCAD 306          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP72_PARBA (Heat shock 70 kDa protein 2 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-2 PE=2 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 3.895e-52
Identity = 100/113 (88.50%), Postives = 107/113 (94.69%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMD 341
            LIFDLGGGTFDVSLLTIEEGIFEVK+TAGDTHLGGEDFDNR+VNHFV EFKRK+KKD+S N RALRRLRTACERAKRTLSS AQT+IEIDSLYEGIDFY++ITRARFEEL  D
Sbjct:  194 LIFDLGGGTFDVSLLTIEEGIFEVKSTAGDTHLGGEDFDNRLVNHFVNEFKRKHKKDLSSNARALRRLRTACERAKRTLSSAAQTSIEIDSLYEGIDFYTSITRARFEELCQD 306          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP70_NEUCR (Heat shock 70 kDa protein OS=Neurospora crassa GN=hsps-1 PE=2 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 3.895e-52
Identity = 100/113 (88.50%), Postives = 109/113 (96.46%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMD 341
            LIFDLGGGTFDVSLLTIEEGIFEVK+TAGDTHLGGEDFDNR+VNHFVQEFKRK+KKD+S N RALRRLRTACERAKRTLSS+AQT+IEIDSL+EGIDFY++ITRARFEEL  D
Sbjct:  194 LIFDLGGGTFDVSLLTIEEGIFEVKSTAGDTHLGGEDFDNRLVNHFVQEFKRKHKKDLSTNARALRRLRTACERAKRTLSSSAQTSIEIDSLFEGIDFYTSITRARFEELCQD 306          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP72_YEAST (Heat shock protein SSA2 OS=Saccharomyces cerevisiae GN=SSA2 PE=1 SV=3)

HSP 1 Score: 202.216 bits (513), Expect = 6.644e-52
Identity = 98/113 (86.73%), Postives = 109/113 (96.46%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMD 341
            LIFDLGGGTFDVSLL+IE+GIFEVKATAGDTHLGGEDFDNR+VNHF+QEFKRKNKKD+S N RALRRLRTACERAKRTLSS+AQT++EIDSL+EGIDFY++ITRARFEEL  D
Sbjct:  193 LIFDLGGGTFDVSLLSIEDGIFEVKATAGDTHLGGEDFDNRLVNHFIQEFKRKNKKDLSTNQRALRRLRTACERAKRTLSSSAQTSVEIDSLFEGIDFYTSITRARFEELCAD 305          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP71_YEAST (Heat shock protein SSA1 OS=Saccharomyces cerevisiae GN=SSA1 PE=1 SV=4)

HSP 1 Score: 202.216 bits (513), Expect = 6.644e-52
Identity = 98/113 (86.73%), Postives = 109/113 (96.46%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMD 341
            LIFDLGGGTFDVSLL+IE+GIFEVKATAGDTHLGGEDFDNR+VNHF+QEFKRKNKKD+S N RALRRLRTACERAKRTLSS+AQT++EIDSL+EGIDFY++ITRARFEEL  D
Sbjct:  193 LIFDLGGGTFDVSLLSIEDGIFEVKATAGDTHLGGEDFDNRLVNHFIQEFKRKNKKDLSTNQRALRRLRTACERAKRTLSSSAQTSVEIDSLFEGIDFYTSITRARFEELCAD 305          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP72_PICAN (Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 PE=3 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 1.133e-51
Identity = 98/113 (86.73%), Postives = 107/113 (94.69%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMD 341
            LIFDLGGGTFDVSLL+IE+GIFEVKATAGDTHLGGEDFDNR+VNHF+ EFKRKNKKDI GN RALRRLRTACERAK TLSS+AQT++EIDSLYEGIDFY++ITRARFEEL  D
Sbjct:  194 LIFDLGGGTFDVSLLSIEDGIFEVKATAGDTHLGGEDFDNRLVNHFINEFKRKNKKDICGNQRALRRLRTACERAKTTLSSSAQTSLEIDSLYEGIDFYTSITRARFEELCQD 306          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP72_CANAL (Heat shock protein SSA2 OS=Candida albicans GN=SSA2 PE=1 SV=3)

HSP 1 Score: 201.445 bits (511), Expect = 1.133e-51
Identity = 100/113 (88.50%), Postives = 108/113 (95.58%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMD 341
            LIFDLGGGTFDVSLL+IE+GIFEVKATAGDTHLGGEDFDNR+VN F+QEFKRKNKKDIS N RALRRLRTACERAKRTLSS+AQT+IEIDSLYEGIDFY++ITRARFEEL  D
Sbjct:  194 LIFDLGGGTFDVSLLSIEDGIFEVKATAGDTHLGGEDFDNRLVNFFIQEFKRKNKKDISTNQRALRRLRTACERAKRTLSSSAQTSIEIDSLYEGIDFYTSITRARFEELCAD 306          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP70_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=hsp70 PE=1 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 1.133e-51
Identity = 100/113 (88.50%), Postives = 107/113 (94.69%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMD 341
            LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNR+VNHFV EFKRK+KKD+S N RALRRLRTACERAKRTLSS AQT+IEIDSL+EGIDFY++ITRARFEEL  D
Sbjct:  194 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVTEFKRKHKKDLSTNARALRRLRTACERAKRTLSSAAQTSIEIDSLFEGIDFYTSITRARFEELCQD 306          
The following BLAST results are available for this feature:
BLAST of CX288666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_USTMA1.025e-5291.82Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=... [more]
HSP71_SCHPO2.982e-5288.50Probable heat shock protein ssa1 OS=Schizosaccharo... [more]
HSP72_SCHPO3.895e-5287.61Probable heat shock protein ssa2 OS=Schizosaccharo... [more]
HSP72_PARBA3.895e-5288.50Heat shock 70 kDa protein 2 OS=Paracoccidioides br... [more]
HSP70_NEUCR3.895e-5288.50Heat shock 70 kDa protein OS=Neurospora crassa GN=... [more]
HSP72_YEAST6.644e-5286.73Heat shock protein SSA2 OS=Saccharomyces cerevisia... [more]
HSP71_YEAST6.644e-5286.73Heat shock protein SSA1 OS=Saccharomyces cerevisia... [more]
HSP72_PICAN1.133e-5186.73Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 ... [more]
HSP72_CANAL1.133e-5188.50Heat shock protein SSA2 OS=Candida albicans GN=SSA... [more]
HSP70_EMENI1.133e-5188.50Heat shock 70 kDa protein OS=Emericella nidulans G... [more]

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Properties
Property NameValue
Genbank descriptionC02003A05SK IF1 Citrus clementina cDNA clone C02003A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288666 ID=CX288666; Name=CX288666; organism=Citrus clementina; type=EST; length=342bp
TGTTGATCTTTGATCTGGGTGGCGGTACTTTTGATGTGTCGTTGCTCACT
ATTGAGGAGGGAATCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCT
TGGTGGTGAGGATTTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGT
TTAAGAGGAAGAACAAGAAGGATATTAGCGGTAACCCTAGAGCTCTTAGG
AGATTGAGGACTGCTTGTGAGAGAGCGAAGAGGACTCTCTCCTCTACTGC
CCAGACTACAATTGAGATTGATTCTTTGTATGAGGGTATTGACTTCTACT
CAACCATAACTCGTGCCAGATTTGAGGAGTTGAACATGGATC
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