CX288666

Overview
NameCX288666
Unique NameCX288666
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length342
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP70_TRYCR (Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 1.027e-44
Identity = 90/111 (81.08%), Postives = 99/111 (89.19%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNK-KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEEL 332
            LIFDLGGGTFDV+LLTI+ GIFEVKAT GDTHLGGEDFDNR+V HF  EFKRKNK KD+S N RALRRLRTACERAKRTLSS AQ TIEID+L++ +DF +TITRARFEEL
Sbjct:  198 LIFDLGGGTFDVTLLTIDGGIFEVKATNGDTHLGGEDFDNRLVAHFTDEFKRKNKGKDLSTNLRALRRLRTACERAKRTLSSAAQATIEIDALFDNVDFQATITRARFEEL 308          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP75_SCHPO (Heat shock protein sks2 OS=Schizosaccharomyces pombe GN=sks2 PE=1 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 2.289e-44
Identity = 86/111 (77.48%), Postives = 97/111 (87.39%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELN 335
            LIFDLGGGTFDVSLL I+ G+FEV ATAGDTHLGGEDFDN +V HF+QEFKRK K DIS +PRALRRLR+ACERAKR LSS  QTT+E+DSL  GIDF S+ITRARFE++N
Sbjct:  198 LIFDLGGGTFDVSLLKIQGGVFEVLATAGDTHLGGEDFDNALVEHFIQEFKRKQKIDISDDPRALRRLRSACERAKRALSSVTQTTVEVDSLSNGIDFSSSITRARFEDIN 308          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP74_PARLI (Heat shock 70 kDa protein IV OS=Paracentrotus lividus GN=HSP70IV PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 2.989e-44
Identity = 86/113 (76.11%), Postives = 99/113 (87.61%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMD 341
            LIFDLGGGTFDVSLL I++G+FEV  TAGDTHLGGEDFDNR+VNH   EFKRK KKD+  NPRA+RRLRTA ERAKRTLSS+AQ  IE+DSL+EGIDFY++I+RARFE+L  D
Sbjct:  196 LIFDLGGGTFDVSLLAIDDGVFEVLTTAGDTHLGGEDFDNRLVNHTSLEFKRKYKKDMRTNPRAIRRLRTAAERAKRTLSSSAQANIEVDSLFEGIDFYTSISRARFEDLCSD 308          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP75_DROME (Major heat shock 70 kDa protein Bc OS=Drosophila melanogaster GN=Hsp70Bc PE=2 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 1.484e-43
Identity = 85/114 (74.56%), Postives = 100/114 (87.72%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMD 341
            LIFDLGGGTFDVS+LTI+EG +FEV++TAGDTHLGGEDFDNR+V H  +EFKRK KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+EG DFY+ ++RARFEEL  D
Sbjct:  193 LIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKVSRARFEELCAD 306          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP74_DROME (Major heat shock 70 kDa protein Bbb OS=Drosophila melanogaster GN=Hsp70Bbb PE=2 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 1.484e-43
Identity = 85/114 (74.56%), Postives = 100/114 (87.72%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMD 341
            LIFDLGGGTFDVS+LTI+EG +FEV++TAGDTHLGGEDFDNR+V H  +EFKRK KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+EG DFY+ ++RARFEEL  D
Sbjct:  193 LIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKVSRARFEELCAD 306          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP73_DROME (Major heat shock 70 kDa protein Bb OS=Drosophila melanogaster GN=Hsp70Bb PE=2 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 1.484e-43
Identity = 85/114 (74.56%), Postives = 100/114 (87.72%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMD 341
            LIFDLGGGTFDVS+LTI+EG +FEV++TAGDTHLGGEDFDNR+V H  +EFKRK KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+EG DFY+ ++RARFEEL  D
Sbjct:  193 LIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKVSRARFEELCAD 306          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP72_DROSI (Major heat shock 70 kDa protein Ba OS=Drosophila simulans GN=Hsp70Ba PE=2 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 1.484e-43
Identity = 85/114 (74.56%), Postives = 100/114 (87.72%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMD 341
            LIFDLGGGTFDVS+LTI+EG +FEV++TAGDTHLGGEDFDNR+V H  +EFKRK KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+EG DFY+ ++RARFEEL  D
Sbjct:  193 LIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKVSRARFEELCAD 306          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP72_DROME (Major heat shock 70 kDa protein Ba OS=Drosophila melanogaster GN=Hsp70Ba PE=2 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 1.484e-43
Identity = 85/114 (74.56%), Postives = 100/114 (87.72%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMD 341
            LIFDLGGGTFDVS+LTI+EG +FEV++TAGDTHLGGEDFDNR+V H  +EFKRK KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+EG DFY+ ++RARFEEL  D
Sbjct:  193 LIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKVSRARFEELCAD 306          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP71_DROSI (Major heat shock 70 kDa protein Ab OS=Drosophila simulans GN=Hsp70Ab PE=2 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 1.484e-43
Identity = 85/114 (74.56%), Postives = 100/114 (87.72%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMD 341
            LIFDLGGGTFDVS+LTI+EG +FEV++TAGDTHLGGEDFDNR+V H  +EFKRK KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+EG DFY+ ++RARFEEL  D
Sbjct:  193 LIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKVSRARFEELCAD 306          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP71_DROME (Major heat shock 70 kDa protein Ab OS=Drosophila melanogaster GN=Hsp70Ab PE=1 SV=3)

HSP 1 Score: 173.711 bits (439), Expect = 2.530e-43
Identity = 85/114 (74.56%), Postives = 99/114 (86.84%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMD 341
            LIFDLGGGTFDVS+LTI+EG +FEV++TAGDTHLGGEDFDNR+V H   EFKRK KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+EG DFY+ ++RARFEEL  D
Sbjct:  193 LIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLADEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKVSRARFEELCAD 306          
The following BLAST results are available for this feature:
BLAST of CX288666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_TRYCR1.027e-4481.08Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=... [more]
HSP75_SCHPO2.289e-4477.48Heat shock protein sks2 OS=Schizosaccharomyces pom... [more]
HSP74_PARLI2.989e-4476.11Heat shock 70 kDa protein IV OS=Paracentrotus livi... [more]
HSP75_DROME1.484e-4374.56Major heat shock 70 kDa protein Bc OS=Drosophila m... [more]
HSP74_DROME1.484e-4374.56Major heat shock 70 kDa protein Bbb OS=Drosophila ... [more]
HSP73_DROME1.484e-4374.56Major heat shock 70 kDa protein Bb OS=Drosophila m... [more]
HSP72_DROSI1.484e-4374.56Major heat shock 70 kDa protein Ba OS=Drosophila s... [more]
HSP72_DROME1.484e-4374.56Major heat shock 70 kDa protein Ba OS=Drosophila m... [more]
HSP71_DROSI1.484e-4374.56Major heat shock 70 kDa protein Ab OS=Drosophila s... [more]
HSP71_DROME2.530e-4374.56Major heat shock 70 kDa protein Ab OS=Drosophila m... [more]

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Properties
Property NameValue
Genbank descriptionC02003A05SK IF1 Citrus clementina cDNA clone C02003A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288666 ID=CX288666; Name=CX288666; organism=Citrus clementina; type=EST; length=342bp
TGTTGATCTTTGATCTGGGTGGCGGTACTTTTGATGTGTCGTTGCTCACT
ATTGAGGAGGGAATCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCT
TGGTGGTGAGGATTTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGT
TTAAGAGGAAGAACAAGAAGGATATTAGCGGTAACCCTAGAGCTCTTAGG
AGATTGAGGACTGCTTGTGAGAGAGCGAAGAGGACTCTCTCCTCTACTGC
CCAGACTACAATTGAGATTGATTCTTTGTATGAGGGTATTGACTTCTACT
CAACCATAACTCGTGCCAGATTTGAGGAGTTGAACATGGATC
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