CX288666

Overview
NameCX288666
Unique NameCX288666
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length342
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP70_DROME (Major heat shock 70 kDa protein Aa OS=Drosophila melanogaster GN=Hsp70Aa PE=2 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 2.530e-43
Identity = 85/114 (74.56%), Postives = 99/114 (86.84%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMD 341
            LIFDLGGGTFDVS+LTI+EG +FEV++TAGDTHLGGEDFDNR+V H   EFKRK KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+EG DFY+ ++RARFEEL  D
Sbjct:  193 LIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLADEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKVSRARFEELCAD 306          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP70_LEIMA (Heat shock 70 kDa protein (Fragment) OS=Leishmania major GN=HSP70 PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 3.305e-43
Identity = 87/111 (78.38%), Postives = 98/111 (88.29%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNK-KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEEL 332
            LIFDLGGGTFDV+LLTI+ GIFEVKAT GDTHLGGEDFDNR+V  F +EFKRKNK K+++ + RALRRLRTACERAKRTLSS  Q TIEID+L+E IDF +TITRARFEEL
Sbjct:  198 LIFDLGGGTFDVTLLTIDRGIFEVKATNGDTHLGGEDFDNRLVTFFTEEFKRKNKGKNLASSHRALRRLRTACERAKRTLSSATQATIEIDALFENIDFQATITRARFEEL 308          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP70_LEIDO (Heat shock 70 kDa protein OS=Leishmania donovani GN=HSP70 PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 2.142e-42
Identity = 86/111 (77.48%), Postives = 97/111 (87.39%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNK-KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEEL 332
            LIFDLGGGTFDVSLLTI+ GIFEVKAT GDTHLGGEDFDNR+V  F +EFKRKNK K+++ + RALR LRTACERAKRTLSS  Q TIEID+L+E +DF +TITRARFEEL
Sbjct:  197 LIFDLGGGTFDVSLLTIDGGIFEVKATNGDTHLGGEDFDNRLVTFFTEEFKRKNKGKNLASSHRALRGLRTACERAKRTLSSATQATIEIDALFENVDFQATITRARFEEL 307          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP70_THEPA (Heat shock 70 kDa protein OS=Theileria parva GN=TP02_0148 PE=2 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 2.798e-42
Identity = 86/111 (77.48%), Postives = 97/111 (87.39%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKR-KNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEEL 332
            LIFDLGGGTFDVS+LTIE+GIFEVKATAGDTHLGGEDFDN +V H V++F R  N K+IS N RALRRLRT CERAKR LSS+ Q TIE+DSLYEGID+ +TI+RARFEEL
Sbjct:  196 LIFDLGGGTFDVSILTIEDGIFEVKATAGDTHLGGEDFDNLLVEHCVRDFMRLNNGKNISSNKRALRRLRTHCERAKRVLSSSTQATIELDSLYEGIDYNTTISRARFEEL 306          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP70_THEAN (Heat shock 70 kDa protein OS=Theileria annulata GN=TA11610 PE=3 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 2.798e-42
Identity = 86/111 (77.48%), Postives = 97/111 (87.39%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKR-KNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEEL 332
            LIFDLGGGTFDVS+LTIE+GIFEVKATAGDTHLGGEDFDN +V H V++F R  N K+IS N RALRRLRT CERAKR LSS+ Q TIE+DSLYEGID+ +TI+RARFEEL
Sbjct:  196 LIFDLGGGTFDVSILTIEDGIFEVKATAGDTHLGGEDFDNLLVEHCVRDFMRLNNGKNISSNKRALRRLRTHCERAKRVLSSSTQATIELDSLYEGIDYNTTISRARFEEL 306          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP70_CERCA (Heat shock protein 70 OS=Ceratitis capitata PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 4.772e-42
Identity = 85/114 (74.56%), Postives = 100/114 (87.72%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMD 341
            LIFDLGGGTFDVS+LTI+EG +FEV+ATAGDTHLG EDFDNR+V+H  +EFKRK KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+EGID Y+ ++RARFEEL  D
Sbjct:  193 LIFDLGGGTFDVSILTIDEGSLFEVRATAGDTHLG-EDFDNRLVSHLAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGIDLYTKVSRARFEELCAD 305          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP7A_DROSI (Heat shock 70 kDa protein cognate 1 (Fragments) OS=Drosophila simulans GN=Hsc70-1 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 8.140e-42
Identity = 83/106 (78.30%), Postives = 96/106 (90.57%), Query Frame = 3
Query:   24 GTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMD 341
            GTFDVS+LTIE+G FEVKATAGDTHLG EDFDNR+VNH VQEF+RK+ KD+  N RALRRLRTACERAKRTLSS+ Q +IEIDSL+EG+DFY+++TRARFEELN D
Sbjct:  105 GTFDVSVLTIEDG-FEVKATAGDTHLGREDFDNRLVNHLVQEFQRKHGKDLGQNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSVTRARFEELNGD 209          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP70_LEIAM (Heat shock 70 kDa protein OS=Leishmania amazonensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.389e-41
Identity = 83/111 (74.77%), Postives = 97/111 (87.39%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNK-KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEEL 332
            LIFDLGGGTFDV+LLTI+ GIFEVKAT GDTHLGGEDFDNR+V  F +EFKRKNK K+++ + R+LRRLRTACERAKRTLSS  Q TIEID+L++ +DF +TI RARFEEL
Sbjct:  198 LIFDLGGGTFDVTLLTIDGGIFEVKATNGDTHLGGEDFDNRLVTFFTEEFKRKNKGKNLASSHRSLRRLRTACERAKRTLSSATQATIEIDALFDNVDFQATINRARFEEL 308          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP75_ZYGRC (Heat shock protein SSB OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / IFO 1130 / NBRC 1623 / NCYC 568) GN=SSB PE=3 SV=3)

HSP 1 Score: 164.851 bits (416), Expect = 1.175e-40
Identity = 80/111 (72.07%), Postives = 93/111 (83.78%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELN 335
            LIFDLGGGTFDVSLL I  G++ VK+T+G+THLGG+DFD  M+ HF  EFK+K   DISG+ RALRRLRTACERAKRTLSS  QTTIE+DSLY G DF ++ITRARFE+LN
Sbjct:  199 LIFDLGGGTFDVSLLHIAGGVYTVKSTSGNTHLGGQDFDTNMLEHFKNEFKKKTGNDISGDARALRRLRTACERAKRTLSSVTQTTIEVDSLYNGDDFETSITRARFEDLN 309          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP75_CANAL (Heat shock protein SSB1 OS=Candida albicans GN=SSB1 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 7.619e-40
Identity = 78/111 (70.27%), Postives = 93/111 (83.78%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELN 335
            LIFDLGGGTFDVSLL I  G+F VKATAGDTHLGG+DFD  ++ HF +EF++K   DIS + RALRRLRTACERAKR+LSS  QTT+EIDSL++G DF + ITRARFE++N
Sbjct:  199 LIFDLGGGTFDVSLLNITGGVFTVKATAGDTHLGGQDFDTNLLEHFKKEFQKKTGNDISSDARALRRLRTACERAKRSLSSGTQTTVEIDSLFDGEDFSANITRARFEDIN 309          
The following BLAST results are available for this feature:
BLAST of CX288666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_DROME2.530e-4374.56Major heat shock 70 kDa protein Aa OS=Drosophila m... [more]
HSP70_LEIMA3.305e-4378.38Heat shock 70 kDa protein (Fragment) OS=Leishmania... [more]
HSP70_LEIDO2.142e-4277.48Heat shock 70 kDa protein OS=Leishmania donovani G... [more]
HSP70_THEPA2.798e-4277.48Heat shock 70 kDa protein OS=Theileria parva GN=TP... [more]
HSP70_THEAN2.798e-4277.48Heat shock 70 kDa protein OS=Theileria annulata GN... [more]
HSP70_CERCA4.772e-4274.56Heat shock protein 70 OS=Ceratitis capitata PE=2 S... [more]
HSP7A_DROSI8.140e-4278.30Heat shock 70 kDa protein cognate 1 (Fragments) OS... [more]
HSP70_LEIAM1.389e-4174.77Heat shock 70 kDa protein OS=Leishmania amazonensi... [more]
HSP75_ZYGRC1.175e-4072.07Heat shock protein SSB OS=Zygosaccharomyces rouxii... [more]
HSP75_CANAL7.619e-4070.27Heat shock protein SSB1 OS=Candida albicans GN=SSB... [more]

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Properties
Property NameValue
Genbank descriptionC02003A05SK IF1 Citrus clementina cDNA clone C02003A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288666 ID=CX288666; Name=CX288666; organism=Citrus clementina; type=EST; length=342bp
TGTTGATCTTTGATCTGGGTGGCGGTACTTTTGATGTGTCGTTGCTCACT
ATTGAGGAGGGAATCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCT
TGGTGGTGAGGATTTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGT
TTAAGAGGAAGAACAAGAAGGATATTAGCGGTAACCCTAGAGCTCTTAGG
AGATTGAGGACTGCTTGTGAGAGAGCGAAGAGGACTCTCTCCTCTACTGC
CCAGACTACAATTGAGATTGATTCTTTGTATGAGGGTATTGACTTCTACT
CAACCATAACTCGTGCCAGATTTGAGGAGTTGAACATGGATC
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