CX288666
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: DNAK_RHOPS (Chaperone protein dnaK OS=Rhodopseudomonas palustris (strain BisB5) GN=dnaK PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.486e-22 Identity = 54/113 (47.79%), Postives = 75/113 (66.37%), Query Frame = 3 Query: 6 IFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYSTITRARFEEL 332 ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R+VN+ EF+++ ++ + AL+RL+ A E+AK LSST QT I + + +TRA+FE L Sbjct: 191 VYDLGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDMRLVNYLADEFQKEQGINLRNDKLALQRLKEAAEKAKIELSSTTQTEINLPFITADQSGPKHLTMKLTRAKFEAL 303
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: DNAK_MYCVP (Chaperone protein dnaK OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=dnaK PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.486e-22 Identity = 54/118 (45.76%), Postives = 78/118 (66.10%), Query Frame = 3 Query: 3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIE-----IDSLYEGIDFYSTITRARFEELNMD 341 L+FDLGGGTFDVSLL I EG+ EV+AT+GD HLGG+D+D+R+V V +FK + D++ + A++RLR A E+AK LSS+ T+I +D+ + +TRA F+ + D Sbjct: 167 LVFDLGGGTFDVSLLEIGEGVVEVRATSGDNHLGGDDWDDRIVEWLVDKFKGTSGIDLTKDKMAMQRLREAAEKAKIELSSSQSTSINLPYITVDADKNPLFLDEQLTRAEFQRITQD 284
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: DNAK_MYCUA (Chaperone protein dnaK OS=Mycobacterium ulcerans (strain Agy99) GN=dnaK PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.486e-22 Identity = 54/118 (45.76%), Postives = 78/118 (66.10%), Query Frame = 3 Query: 3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIE-----IDSLYEGIDFYSTITRARFEELNMD 341 L+FDLGGGTFDVSLL I EG+ EV+AT+GD HLGG+D+D+R+V V +FK + D++ + A++RLR A E+AK LSS+ T+I +D+ + +TRA F+ + D Sbjct: 167 LVFDLGGGTFDVSLLEIGEGVVEVRATSGDNHLGGDDWDDRVVEWLVDKFKGTSGIDLTKDKMAMQRLREAAEKAKIELSSSQSTSINLPYITVDADKNPLFLDEQLTRAEFQRITQD 284
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: DNAK_MYCTU (Chaperone protein dnaK OS=Mycobacterium tuberculosis GN=dnaK PE=2 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 5.486e-22 Identity = 54/118 (45.76%), Postives = 78/118 (66.10%), Query Frame = 3 Query: 3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIE-----IDSLYEGIDFYSTITRARFEELNMD 341 L+FDLGGGTFDVSLL I EG+ EV+AT+GD HLGG+D+D R+V+ V +FK + D++ + A++RLR A E+AK LSS+ T+I +D+ + +TRA F+ + D Sbjct: 167 LVFDLGGGTFDVSLLEIGEGVVEVRATSGDNHLGGDDWDQRVVDWLVDKFKGTSGIDLTKDKMAMQRLREAAEKAKIELSSSQSTSINLPYITVDADKNPLFLDEQLTRAEFQRITQD 284
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: DNAK_MYCTA (Chaperone protein dnaK OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=dnaK PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.486e-22 Identity = 54/118 (45.76%), Postives = 78/118 (66.10%), Query Frame = 3 Query: 3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIE-----IDSLYEGIDFYSTITRARFEELNMD 341 L+FDLGGGTFDVSLL I EG+ EV+AT+GD HLGG+D+D R+V+ V +FK + D++ + A++RLR A E+AK LSS+ T+I +D+ + +TRA F+ + D Sbjct: 167 LVFDLGGGTFDVSLLEIGEGVVEVRATSGDNHLGGDDWDQRVVDWLVDKFKGTSGIDLTKDKMAMQRLREAAEKAKIELSSSQSTSINLPYITVDADKNPLFLDEQLTRAEFQRITQD 284
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: DNAK_MYCMM (Chaperone protein dnaK OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=dnaK PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.486e-22 Identity = 54/118 (45.76%), Postives = 78/118 (66.10%), Query Frame = 3 Query: 3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIE-----IDSLYEGIDFYSTITRARFEELNMD 341 L+FDLGGGTFDVSLL I EG+ EV+AT+GD HLGG+D+D+R+V V +FK + D++ + A++RLR A E+AK LSS+ T+I +D+ + +TRA F+ + D Sbjct: 167 LVFDLGGGTFDVSLLEIGEGVVEVRATSGDNHLGGDDWDDRVVEWLVDKFKGTSGIDLTKDKMAMQRLREAAEKAKIELSSSQSTSINLPYITVDADKNPLFLDEQLTRAEFQRITQD 284
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: DNAK_MYCBT (Chaperone protein dnaK OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=dnaK PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.486e-22 Identity = 54/118 (45.76%), Postives = 78/118 (66.10%), Query Frame = 3 Query: 3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIE-----IDSLYEGIDFYSTITRARFEELNMD 341 L+FDLGGGTFDVSLL I EG+ EV+AT+GD HLGG+D+D R+V+ V +FK + D++ + A++RLR A E+AK LSS+ T+I +D+ + +TRA F+ + D Sbjct: 167 LVFDLGGGTFDVSLLEIGEGVVEVRATSGDNHLGGDDWDQRVVDWLVDKFKGTSGIDLTKDKMAMQRLREAAEKAKIELSSSQSTSINLPYITVDADKNPLFLDEQLTRAEFQRITQD 284
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: DNAK_MYCBP (Chaperone protein dnaK OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=dnaK PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.486e-22 Identity = 54/118 (45.76%), Postives = 78/118 (66.10%), Query Frame = 3 Query: 3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIE-----IDSLYEGIDFYSTITRARFEELNMD 341 L+FDLGGGTFDVSLL I EG+ EV+AT+GD HLGG+D+D R+V+ V +FK + D++ + A++RLR A E+AK LSS+ T+I +D+ + +TRA F+ + D Sbjct: 167 LVFDLGGGTFDVSLLEIGEGVVEVRATSGDNHLGGDDWDQRVVDWLVDKFKGTSGIDLTKDKMAMQRLREAAEKAKIELSSSQSTSINLPYITVDADKNPLFLDEQLTRAEFQRITQD 284
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: DNAK_MYCBO (Chaperone protein dnaK OS=Mycobacterium bovis GN=dnaK PE=2 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 5.486e-22 Identity = 54/118 (45.76%), Postives = 78/118 (66.10%), Query Frame = 3 Query: 3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIE-----IDSLYEGIDFYSTITRARFEELNMD 341 L+FDLGGGTFDVSLL I EG+ EV+AT+GD HLGG+D+D R+V+ V +FK + D++ + A++RLR A E+AK LSS+ T+I +D+ + +TRA F+ + D Sbjct: 167 LVFDLGGGTFDVSLLEIGEGVVEVRATSGDNHLGGDDWDQRVVDWLVDKFKGTSGIDLTKDKMAMQRLREAAEKAKIELSSSQSTSINLPYITVDADKNPLFLDEQLTRAEFQRITQD 284
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: DNAK_METRJ (Chaperone protein dnaK OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=dnaK PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.486e-22 Identity = 57/115 (49.57%), Postives = 77/115 (66.96%), Query Frame = 3 Query: 6 IFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID------FYSTITRARFEEL 332 ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFDNR+V + EFK++ D++ + AL+RL+ A E+AK LSS QT EI+ Y D ++RA+FE L Sbjct: 191 VYDLGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDNRIVEYLTAEFKKEQGIDLTKDKLALQRLKEAAEKAKIELSSATQT--EINLPYITADNTGPKHLALKLSRAKFESL 303 The following BLAST results are available for this feature:
BLAST of CX288666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288666 ID=CX288666; Name=CX288666; organism=Citrus clementina; type=EST; length=342bpback to top |