CX288674
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288674 vs. ExPASy Swiss-Prot
Match: UBC20_ARATH (Ubiquitin carrier protein E2 20 OS=Arabidopsis thaliana GN=UBC20 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 7.677e-17 Identity = 39/82 (47.56%), Postives = 55/82 (67.07%), Query Frame = 2 Query: 2 FLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDK 247 + +S+ F DYPFKPPKV F T FHPN++ G+ICLDIL+++WS A + +LLSI SLL +PN PL + A ++ + Sbjct: 84 YRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQE 165
BLAST of CX288674 vs. ExPASy Swiss-Prot
Match: UBC12_DICDI (NEDD8-conjugating enzyme Ubc12 OS=Dictyostelium discoideum GN=ube2m PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 7.677e-17 Identity = 37/90 (41.11%), Postives = 55/90 (61.11%), Query Frame = 2 Query: 2 FLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTAR 271 F +I+ P YP+ PPKV T V+HPNI+ G +CL+IL++ W P L I V+ + +L +PNPDDPL + A + +K +E+ R Sbjct: 124 FQFTINIPSTYPYDPPKVHCDTLVYHPNIDLEGHVCLNILRQDWMPVLNIGTVIFGLMTLFLEPNPDDPLNKDAAQLMIDNKKTFEANVR 213
BLAST of CX288674 vs. ExPASy Swiss-Prot
Match: UBC16_SCHPO (Ubiquitin-conjugating enzyme E2 16 OS=Schizosaccharomyces pombe GN=ubc16 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 1.309e-16 Identity = 43/101 (42.57%), Postives = 61/101 (60.40%), Query Frame = 2 Query: 2 FLVSIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKT-DKAKYESTARSWTQKYAMG 298 +++ IH YP PP V F+TK+ HPNI+ +NG +C+DILK WSPA ++ L+I SLL++ + PL + A + +T DK Y S R T YA G Sbjct: 54 WVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMDILKTHWSPAWSLQSACLAIISLLSNYDASSPLNVDAAKLLRTGDKTAYNSLVRCTTYLYAKG 154
BLAST of CX288674 vs. ExPASy Swiss-Prot
Match: UBC12_DROME (NEDD8-conjugating enzyme Ubc12 OS=Drosophila melanogaster GN=CG7375 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.309e-16 Identity = 34/90 (37.78%), Postives = 61/90 (67.78%), Query Frame = 2 Query: 2 FLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTAR 271 F+ + +YP +PPKV T+V+HPNI+ +G++CL+IL+E W+P L I+ ++ + L +PNP+DPL E A + +T++ ++E+ + Sbjct: 73 FVFNFRVGSNYPHEPPKVKCATQVYHPNIDLDGNVCLNILREDWNPVLNINSIVYGLQFLFLEPNPEDPLNKEAADVLQTNRRQFENNVK 162
BLAST of CX288674 vs. ExPASy Swiss-Prot
Match: UBC12_CANGA (NEDD8-conjugating enzyme UBC12 OS=Candida glabrata GN=UBC12 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.309e-16 Identity = 39/90 (43.33%), Postives = 55/90 (61.11%), Query Frame = 2 Query: 2 FLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTAR 271 F + F YP PPKV K+FHPNI+ +G ICL+IL+E WSPAL + ++L + SL +PN +DPL E A + DK ++ + R Sbjct: 81 FRFTATFLETYPIDPPKVICNNKIFHPNIDPHGKICLNILREDWSPALDLQCIVLGLLSLFQEPNGNDPLNKEAAEVLNKDKLEFGNLVR 170
BLAST of CX288674 vs. ExPASy Swiss-Prot
Match: UBC9_XENTR (SUMO-conjugating enzyme UBC9 OS=Xenopus tropicalis GN=ube2i PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.710e-16 Identity = 40/99 (40.40%), Postives = 59/99 (59.60%), Query Frame = 2 Query: 2 FLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYA 292 F + + F DYP PPK F +FHPN+ +G++CL IL+E W PA+TI ++LL I LL +PN DP E +Y ++ +YE R+ +K+A Sbjct: 58 FKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFA 156
BLAST of CX288674 vs. ExPASy Swiss-Prot
Match: UBC9_XENLA (SUMO-conjugating enzyme UBC9 OS=Xenopus laevis GN=ube2i PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.710e-16 Identity = 40/99 (40.40%), Postives = 59/99 (59.60%), Query Frame = 2 Query: 2 FLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYA 292 F + + F DYP PPK F +FHPN+ +G++CL IL+E W PA+TI ++LL I LL +PN DP E +Y ++ +YE R+ +K+A Sbjct: 58 FKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFA 156
BLAST of CX288674 vs. ExPASy Swiss-Prot
Match: UBC9_SPETR (SUMO-conjugating enzyme UBC9 OS=Spermophilus tridecemlineatus GN=UBE2I PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.710e-16 Identity = 40/99 (40.40%), Postives = 59/99 (59.60%), Query Frame = 2 Query: 2 FLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYA 292 F + + F DYP PPK F +FHPN+ +G++CL IL+E W PA+TI ++LL I LL +PN DP E +Y ++ +YE R+ +K+A Sbjct: 58 FKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFA 156
BLAST of CX288674 vs. ExPASy Swiss-Prot
Match: UBC9_RAT (SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus GN=Ube2i PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.710e-16 Identity = 40/99 (40.40%), Postives = 59/99 (59.60%), Query Frame = 2 Query: 2 FLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYA 292 F + + F DYP PPK F +FHPN+ +G++CL IL+E W PA+TI ++LL I LL +PN DP E +Y ++ +YE R+ +K+A Sbjct: 58 FKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFA 156
BLAST of CX288674 vs. ExPASy Swiss-Prot
Match: UBC9_MOUSE (SUMO-conjugating enzyme UBC9 OS=Mus musculus GN=Ube2i PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.710e-16 Identity = 40/99 (40.40%), Postives = 59/99 (59.60%), Query Frame = 2 Query: 2 FLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYA 292 F + + F DYP PPK F +FHPN+ +G++CL IL+E W PA+TI ++LL I LL +PN DP E +Y ++ +YE R+ +K+A Sbjct: 58 FKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFA 156 The following BLAST results are available for this feature:
BLAST of CX288674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 227
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288674 ID=CX288674; Name=CX288674; organism=Citrus clementina; type=EST; length=438bpback to top |