CX288674
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288674 vs. ExPASy Swiss-Prot
Match: UBC2_SCHPO (Ubiquitin-conjugating enzyme E2 2 OS=Schizosaccharomyces pombe GN=rhp6 PE=1 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 3.810e-16 Identity = 38/90 (42.22%), Postives = 55/90 (61.11%), Query Frame = 2 Query: 2 FLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTAR 271 F + + F YP KPP V F + +FHPN+ +NG +CLDIL+ +WSP ++ +L SI SLL DPN P E A +++ +K +Y R Sbjct: 53 FKLVLSFDEQYPNKPPLVKFVSTMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNNASPANAEAAQLHRENKKEYVRRVR 142
BLAST of CX288674 vs. ExPASy Swiss-Prot
Match: UBE2C_MOUSE (Ubiquitin-conjugating enzyme E2 C OS=Mus musculus GN=Ube2c PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 6.499e-16 Identity = 37/83 (44.58%), Postives = 53/83 (63.86%), Query Frame = 2 Query: 2 FLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKA 250 + +S+ FP YP+ P V F T +HPN+++ G+ICLDILK++WS + +LLSI SLL +PN D PL A ++K A Sbjct: 79 YKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTA 161
BLAST of CX288674 vs. ExPASy Swiss-Prot
Match: UBE2C_MACFA (Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis GN=UBE2C PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 6.499e-16 Identity = 37/83 (44.58%), Postives = 53/83 (63.86%), Query Frame = 2 Query: 2 FLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKA 250 + +S+ FP YP+ P V F T +HPN+++ G+ICLDILK++WS + +LLSI SLL +PN D PL A ++K A Sbjct: 79 YKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTA 161
BLAST of CX288674 vs. ExPASy Swiss-Prot
Match: UBE2C_BOVIN (Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN=UBE2C PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 6.499e-16 Identity = 37/83 (44.58%), Postives = 53/83 (63.86%), Query Frame = 2 Query: 2 FLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKA 250 + +S+ FP YP+ P V F T +HPN+++ G+ICLDILK++WS + +LLSI SLL +PN D PL A ++K A Sbjct: 79 YKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTA 161
BLAST of CX288674 vs. ExPASy Swiss-Prot
Match: UBC21_ARATH (Probable ubiquitin carrier protein E2 21 OS=Arabidopsis thaliana GN=UBC21 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 6.499e-16 Identity = 41/100 (41.00%), Postives = 61/100 (61.00%), Query Frame = 2 Query: 2 FLVSIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKT-DKAKYESTARSWTQKYAM 295 F ++ P YP +PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD PL + ++ ++ D + S A+ +T+ AM Sbjct: 54 FQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
BLAST of CX288674 vs. ExPASy Swiss-Prot
Match: UBE2S_XENTR (Ubiquitin-conjugating enzyme E2 S OS=Xenopus tropicalis GN=ube2s PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 8.488e-16 Identity = 40/99 (40.40%), Postives = 58/99 (58.59%), Query Frame = 2 Query: 2 FLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYAMG 298 F + + D+P PPK F TK+FHPN+++NG IC+++LK+ W L I VLL+I LL PNP+ L E + + +Y S AR T+ +A G Sbjct: 60 FRMKLILGKDFPAAPPKGYFLTKIFHPNVSTNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRARLMTEIHAQG 158
BLAST of CX288674 vs. ExPASy Swiss-Prot
Match: UBC_ASFB7 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (strain Badajoz 1971 Vero-adapted) GN=UBC PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 8.488e-16 Identity = 42/108 (38.89%), Postives = 62/108 (57.41%), Query Frame = 2 Query: 2 FLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-----KEQ---WSPALTISKVLLSICSLLTDPNPDDPLVPEIA-----HMYKTDKAKYESTARSWTQK 286 F + FPP+YP+ PPK+ F ++++HPNI +G +C+ IL +EQ WSPA I +LLS+ SLL +PNPD P + A ++YK D Y + +K Sbjct: 50 FKAKVAFPPEYPYAPPKLTFTSEMWHPNIYPDGRLCISILHGDNAEEQGMTWSPAQKIDTILLSVISLLNEPNPDSPANVDAAKSYRKYVYKEDLESYPMEVKKTVKK 157
BLAST of CX288674 vs. ExPASy Swiss-Prot
Match: UBE2C_DROME (Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.109e-15 Identity = 39/96 (40.62%), Postives = 61/96 (63.54%), Query Frame = 2 Query: 2 FLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKY 289 + +S+ FP YP+ P V F T FHPN++ G+ICLDILK++WS + +LLSI SLL +PN + PL + A M+ D+ +Y+ ++ +K+ Sbjct: 81 YRLSLDFPNSYPYAAPVVKFLTSCFHPNVDLQGAICLDILKDKWSALYDVRTILLSIQSLLGEPNNESPLNAQAAMMW-NDQKEYKKYLDAFYEKH 175
BLAST of CX288674 vs. ExPASy Swiss-Prot
Match: UBC9_DICDI (Sumo-conjugating enzyme ubc9 OS=Dictyostelium discoideum GN=ubc9 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.109e-15 Identity = 38/94 (40.43%), Postives = 56/94 (59.57%), Query Frame = 2 Query: 14 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKY 289 + F DYP KPPK F FHPN+ +G++CL IL E+ W P++TI VLL I LL +PNP P H++ T+K +Y+ ++ ++ Y Sbjct: 62 MEFTEDYPSKPPKCRFPKDFFHPNVYPSGTVCLSILNEEADWKPSVTIKTVLLGIQDLLDNPNPKSPAQQLPIHLFLTNKEEYDKKVKAQSKVY 155
BLAST of CX288674 vs. ExPASy Swiss-Prot
Match: UBC21_CAEEL (Probable ubiquitin-conjugating enzyme E2 21 OS=Caenorhabditis elegans GN=ubc-21 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 1.109e-15 Identity = 42/113 (37.17%), Postives = 64/113 (56.64%), Query Frame = 2 Query: 2 FLVSIHFPPDYPFKPPKVA---------------FRTKVFHPNINSN-GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYA 292 F + + P YPF+PPKV F T+++HPNI+S G+ICLDILK++W+ +LT+ VLLS+ ++L P P DP +A + + + +TA WT +A Sbjct: 70 FEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDILKDKWTASLTLRTVLLSLQAMLCSPEPSDPQDAVVAKQFINNYPMFTATAVYWTSYFA 182 The following BLAST results are available for this feature:
BLAST of CX288674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 227
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288674 ID=CX288674; Name=CX288674; organism=Citrus clementina; type=EST; length=438bpback to top |