CX288696

Overview
NameCX288696
Unique NameCX288696
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length612
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288696 vs. ExPASy Swiss-Prot
Match: SAHH_PSEFS (Adenosylhomocysteinase OS=Pseudomonas fluorescens (strain SBW25) GN=ahcY PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.918e-27
Identity = 77/175 (44.00%), Postives = 101/175 (57.71%), Query Frame = 2
Query:    8 TRNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL-------ETYPGVKRITIKPQTDRWVFPETNSG-IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEK-----STGKYEK-KVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 490
            T N ++   + +K +K  A+VCNIGHFDNEID   +       E  P V ++    +T    F   N   +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+ +K        K E+  V VLPK LDE+V            T+LTK QADYI V+ +GP+KP  YRY
Sbjct:  298 TGNVNVCDANMLKALKKRAVVCNIGHFDNEIDTAFMRKNWAWEEVKPQVHKVH---RTGAGAFDAQNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIFLFGQKYADLSPAQKAERLTVEVLPKKLDEEVALEMVRGFGGVVTQLTKTQADYIGVTVEGPFKPHAYRY 469          
BLAST of CX288696 vs. ExPASy Swiss-Prot
Match: SAHH_PSEAE (Adenosylhomocysteinase OS=Pseudomonas aeruginosa GN=ahcY PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 6.500e-27
Identity = 76/175 (43.43%), Postives = 104/175 (59.43%), Query Frame = 2
Query:    8 TRNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL-------ETYPGVKRITIKPQTDRWVFPETNSG-IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEK-----STGKYEK-KVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 490
            T N ++   + +K +K  A+VCNIGHFDNEID   +       E  P V +I    +T +  F   N   +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+++K     +  K ++  V VLPK LDE+V            T+LT +QA+YI VS +GP+KP  YRY
Sbjct:  298 TGNVNVCDANMLKALKKRAVVCNIGHFDNEIDTAFMRKNWAWEEVKPQVHKIH---RTGKDGFDAHNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIHLFEQKYADLPAAEKAKRLSVEVLPKKLDEEVALEMVKGFGGVVTQLTPKQAEYIGVSVEGPFKPDTYRY 469          
BLAST of CX288696 vs. ExPASy Swiss-Prot
Match: SAHH_PSEAB (Adenosylhomocysteinase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=ahcY PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 6.500e-27
Identity = 76/175 (43.43%), Postives = 104/175 (59.43%), Query Frame = 2
Query:    8 TRNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL-------ETYPGVKRITIKPQTDRWVFPETNSG-IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEK-----STGKYEK-KVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 490
            T N ++   + +K +K  A+VCNIGHFDNEID   +       E  P V +I    +T +  F   N   +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+++K     +  K ++  V VLPK LDE+V            T+LT +QA+YI VS +GP+KP  YRY
Sbjct:  298 TGNVNVCDANMLKALKKRAVVCNIGHFDNEIDTAFMRKNWAWEEVKPQVHKIH---RTGKDGFDAYNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIHLFEQKYADLPAAEKAKRLSVEVLPKKLDEEVALEMVKGFGGVVTQLTPKQAEYIGVSVEGPFKPDTYRY 469          
BLAST of CX288696 vs. ExPASy Swiss-Prot
Match: SAHH_PSEA8 (Adenosylhomocysteinase OS=Pseudomonas aeruginosa (strain LESB58) GN=ahcY PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 6.500e-27
Identity = 76/175 (43.43%), Postives = 104/175 (59.43%), Query Frame = 2
Query:    8 TRNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL-------ETYPGVKRITIKPQTDRWVFPETNSG-IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEK-----STGKYEK-KVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 490
            T N ++   + +K +K  A+VCNIGHFDNEID   +       E  P V +I    +T +  F   N   +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+++K     +  K ++  V VLPK LDE+V            T+LT +QA+YI VS +GP+KP  YRY
Sbjct:  298 TGNVNVCDANMLKALKKRAVVCNIGHFDNEIDTAFMRKNWAWEEVKPQVHKIH---RTGKDGFDAHNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIHLFEQKYADLPAAEKAKRLSVEVLPKKLDEEVALEMVKGFGGVVTQLTPKQAEYIGVSVEGPFKPDTYRY 469          
BLAST of CX288696 vs. ExPASy Swiss-Prot
Match: SAHH_PSEF5 (Adenosylhomocysteinase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=ahcY PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.109e-26
Identity = 77/175 (44.00%), Postives = 102/175 (58.29%), Query Frame = 2
Query:    8 TRNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL-------ETYPGVKRITIKPQTDRWVFPETNSG-IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEK-----STGKYEK-KVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 490
            T N ++   + +K +K  A+VCNIGHFDNEID   +       E  P V +I    +T    F   N   +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+ +K        K E+  V VLPK LDE+V            T+LTK+QA+YI V+ +GP+KP  YRY
Sbjct:  298 TGNVNVCDANMLKALKKRAVVCNIGHFDNEIDTAFMRKNWAWEEVKPQVHKIH---RTGPGDFDAQNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIFLFGQKYADLSPAQKAERLTVEVLPKKLDEEVALEMVRGFGGVVTQLTKQQAEYIGVTVEGPFKPDAYRY 469          
BLAST of CX288696 vs. ExPASy Swiss-Prot
Match: SAHH_ACIAD (Adenosylhomocysteinase OS=Acinetobacter sp. (strain ADP1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 7.186e-26
Identity = 70/154 (45.45%), Postives = 91/154 (59.09%), Query Frame = 2
Query:   50 MKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPET-NSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEK------STGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 490
            +K  A+VCNIGHFD EID   L  Y   K + +KPQ  +    E  N  +I+L+EGRL+NLG ATGHPS VM  SF NQV+ Q+ L++EK      S    + +V VLPK LDE+V            T+LT  QADY+ V  +GP+K   Y+Y
Sbjct:  317 LKAGAVVCNIGHFDTEIDTNYLRGY---KWVEVKPQVHQVYRSENENDYLILLSEGRLVNLGNATGHPSRVMDGSFANQVLGQIHLFQEKFADLPASEKAAQIRVEVLPKKLDEEVAAAMVLGFGGVLTQLTSVQADYLGVPVEGPFKSDAYKY 467          
BLAST of CX288696 vs. ExPASy Swiss-Prot
Match: SAHH_HAHCH (Adenosylhomocysteinase OS=Hahella chejuensis (strain KCTC 2396) GN=ahcY PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.731e-25
Identity = 67/157 (42.68%), Postives = 94/157 (59.87%), Query Frame = 2
Query:   41 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDR-WVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEK----STGKYEKKVY--VLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 490
            ++ +K+ A+VCNIGHFDNEID   +      +   +KPQ    +   + N  +++L+EGRL+NLG ATGHPS +M  SF NQV+AQ+ L++ K       +  K +Y  VLPK LDE+V            T+LT+ QA YI V  +GPYKP  Y+Y
Sbjct:  309 LQALKSGAVVCNIGHFDNEIDTRFMRD--NWEWEEVKPQVHVIYRNKDQNDHLLLLSEGRLVNLGNATGHPSRIMDGSFANQVLAQMYLFERKFADLPADEKPKNLYVRVLPKQLDEEVARYMVQGFGGVITKLTQPQAKYIGVEVEGPYKPTDYKY 463          
BLAST of CX288696 vs. ExPASy Swiss-Prot
Match: SAHH2_DROME (Putative adenosylhomocysteinase 2 OS=Drosophila melanogaster GN=Ahcy89E PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 3.566e-25
Identity = 66/161 (40.99%), Postives = 99/161 (61.49%), Query Frame = 2
Query:    8 TRNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 490
            T NK++I  DHM +MKN  I+CN+GH  +EID+ GL T P +    ++ Q D   +P+    II+LAEGRL+NL C+T   SFV+S + + Q +A +EL+   + G+Y+  VY+LPK +DE V            T LT EQ+ ++ ++  GP+K  +YRY
Sbjct:  337 TGNKNVITRDHMNRMKNGCILCNMGHSCSEIDVNGLHT-PELTWERVRSQVDHIRWPDGRM-IILLAEGRLVNLSCST-ISSFVVSVASSTQALALIELF--SAPGRYKSDVYLLPKKMDEYVASLHLATFDAHLTELTDEQSKFMGLNKAGPFKANYYRY 492          
BLAST of CX288696 vs. ExPASy Swiss-Prot
Match: SAHH_SULSO (Adenosylhomocysteinase OS=Sulfolobus solfataricus GN=ahcY PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.124e-21
Identity = 61/146 (41.78%), Postives = 81/146 (55.48%), Query Frame = 2
Query:    8 TRNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYI 445
            T N   I V+HM  MK+ AI+ N GHF+ E+D+ GL+    VK   I+P  D +  P     + +LA+GRL+NL  A GHPS VM  SF NQ +A   L K +  GK EKKVY +P  LD +V              LT+EQ +Y+
Sbjct:  269 TGNTKAIRVEHMLNMKDGAILSNAGHFNVEVDVKGLKE-TAVKVRNIRPYVDEYTLPN-GKRVYLLADGRLVNLAAAEGHPSEVMDMSFANQALAVEYLVKNR--GKLEKKVYNMPMELDYEVARIKLKSMGIQIDELTEEQKEYL 410          
BLAST of CX288696 vs. ExPASy Swiss-Prot
Match: SAHH_GLOVI (Adenosylhomocysteinase OS=Gloeobacter violaceus GN=ahcY PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.187e-20
Identity = 59/152 (38.82%), Postives = 82/152 (53.95%), Query Frame = 2
Query:    8 TRNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADG 463
            T NK +I  +H   MK+ AIVCN GHFD EID++ L      +R+ ++P T+ +   E    +IVL EGRL+NL  A GHP+ VM  SF NQ +A   L K +  GK    +Y +P+ LD ++              LT +Q  YIS   +G
Sbjct:  279 TGNKHVIRREHFAMMKDGAIVCNSGHFDIEIDLVALGELSSERRM-VRPFTEEYTL-EGGKSVIVLGEGRLINLAAAEGHPASVMDMSFANQALAVEYLIKNQ--GKLSPGIYNIPEELDRQIAALKLAAMGIAIDTLTPDQLHYISSWDEG 426          
The following BLAST results are available for this feature:
BLAST of CX288696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
SAHH_PSEFS2.918e-2744.00Adenosylhomocysteinase OS=Pseudomonas fluorescens ... [more]
SAHH_PSEAE6.500e-2743.43Adenosylhomocysteinase OS=Pseudomonas aeruginosa G... [more]
SAHH_PSEAB6.500e-2743.43Adenosylhomocysteinase OS=Pseudomonas aeruginosa (... [more]
SAHH_PSEA86.500e-2743.43Adenosylhomocysteinase OS=Pseudomonas aeruginosa (... [more]
SAHH_PSEF51.109e-2644.00Adenosylhomocysteinase OS=Pseudomonas fluorescens ... [more]
SAHH_ACIAD7.186e-2645.45Adenosylhomocysteinase OS=Acinetobacter sp. (strai... [more]
SAHH_HAHCH2.731e-2542.68Adenosylhomocysteinase OS=Hahella chejuensis (stra... [more]
SAHH2_DROME3.566e-2540.99Putative adenosylhomocysteinase 2 OS=Drosophila me... [more]
SAHH_SULSO3.124e-2141.78Adenosylhomocysteinase OS=Sulfolobus solfataricus ... [more]
SAHH_GLOVI1.187e-2038.82Adenosylhomocysteinase OS=Gloeobacter violaceus GN... [more]

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Properties
Property NameValue
Genbank descriptionC02003D02SK IF1 Citrus clementina cDNA clone C02003D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288696 ID=CX288696; Name=CX288696; organism=Citrus clementina; type=EST; length=612bp
ATTCGGCACGAGGAACAAGGACATCATCATGGTTGACCACATGAAGAAGA
TGAAGAACAATGCAATTGTTTGCAACATTGGTCACTTTGATAATGAAATT
GATATGCTCGGTCTTGAGACCTACCCGGGTGTTAAGCGCATTACCATCAA
GCCCCAAACTGATAGGTGGGTCTTCCCGGAGACCAACTCAGGCATCATCG
TGTTGGCTGAGGGACGTCTCATGAACTTGGGATGTGCCACTGGACACCCC
AGCTTTGTGATGTCCTGCTCCTTCACCAACCAGGTGATTGCCCAGCTTGA
GCTCTGGAAGGAGAAGAGCACCGGCAAGTACGAGAAGAAGGTGTACGTTC
TGCCCAAGCACCTCGATGAAAAGGTTGCTGCTCTTCACCTTGGCAAACTT
GGAGCTAAGCTCACCAGGCTCACCAAGGAGCAGGCTGACTACATCAGTGT
GTCCGCCGATGGTCCTTACAAGCCTCTTCACTACAGGTACTAAGTGGAAG
AAGAAGAAGAAGAAGAAGAAGAGTGAATGTTTTGAGGGAAAGAAACAAAA
TATTTGGCCGGCTTGATTGTTTTCAATGATGATCTGTAGTAGGATGTTAG
GTTTAAATTTCG
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