CX288696

Overview
NameCX288696
Unique NameCX288696
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length612
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX288696 vs. ExPASy Swiss-Prot
Match: SAHH_MYCLB (Adenosylhomocysteinase OS=Mycobacterium leprae (strain Br4923) GN=ahcY PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 8.724e-48
Identity = 95/161 (59.01%), Postives = 115/161 (71.43%), Query Frame = 2 
Query:    8 TRNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 490
            T NKDII+++HMK MK++AI+ NIGHFDNEIDM  LE   G  R+ IKPQ D W F ++   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +     Y+ +VY LPKHLDEKV            T+LTK+QA+Y+ V  DGP+KP HYRY
Sbjct:  335 TGNKDIILLEHMKAMKDHAILGNIGHFDNEIDMAALER-SGATRLNIKPQVDLWTFGDSGKSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--DYDNEVYRLPKHLDEKVARVHVEALGGQLTKLTKDQAEYLGVDVDGPFKPDHYRY 492
[Close]
BLAST of CX288696 vs. ExPASy Swiss-Prot
Match: SAHH_CHLCH (Adenosylhomocysteinase OS=Chlorobium chlorochromatii (strain CaD3) GN=ahcY PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 8.724e-48
Identity = 97/161 (60.25%), Postives = 117/161 (72.67%), Query Frame = 2 
Query:    8 TRNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 490
            T NKD+I ++HMK+M++ AIVCNIGHFDNEI +  L   P VK I IKPQ D+++FP  N  + +LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELW++    +Y   VY LPK LDE+V            TRLT EQA+YI VSADGPYKP HYRY
Sbjct:  316 TGNKDVITLEHMKQMRDEAIVCNIGHFDNEIQVDKLNNDPTVKIINIKPQVDKYIFPNGNC-MYLLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELWQK----EYAVDVYRLPKALDEEVARLHLEQIGVRLTRLTPEQAEYIGVSADGPYKPEHYRY 471
[Close]
BLAST of CX288696 vs. ExPASy Swiss-Prot
Match: SAHH_MYCSJ (Adenosylhomocysteinase OS=Mycobacterium sp. (strain JLS) GN=ahcY PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.488e-47
Identity = 99/161 (61.49%), Postives = 116/161 (72.05%), Query Frame = 2 
Query:    8 TRNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 490
            T NKDII +DHMK MK+ AI+ NIGHFDNEIDM  LE   G  RI IKPQ D W F + +S I+VL+EGRL+NLG ATGHPSFVMS SF+NQVIAQ+ELW +    +Y+  VY L KHLDEKV            T+LTKEQA+YI+V  +GPYKP HYRY
Sbjct:  333 TGNKDIITLDHMKAMKDKAILGNIGHFDNEIDMAALER-SGATRINIKPQVDEWTFDDGHS-IVVLSEGRLLNLGNATGHPSFVMSNSFSNQVIAQIELWTKND--EYDNAVYRLAKHLDEKVARIHVEALGGTLTKLTKEQAEYINVDVEGPYKPEHYRY 489
[Close]
BLAST of CX288696 vs. ExPASy Swiss-Prot
Match: SAHH_LEPIN (Adenosylhomocysteinase OS=Leptospira interrogans GN=ahcY PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.943e-47
Identity = 96/161 (59.63%), Postives = 114/161 (70.81%), Query Frame = 2 
Query:    8 TRNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 490
            T N DII ++HMK MK+ AI+CNIGHFD EI M  L    GV +  IKPQ D++ FP+  S IIVLAEGRL+NLGCATGHPSFVMSCSFTNQV+AQ+EL+      KYE  VY LPKHLDEKV            T+L ++QADY+ V  +GP+KP HYRY
Sbjct:  281 TGNDDIITLEHMKAMKDGAILCNIGHFDTEIQMSRLNNEKGVTKKEIKPQVDKYTFPDGKS-IIVLAEGRLVNLGCATGHPSFVMSCSFTNQVLAQIELY----NNKYELGVYTLPKHLDEKVAALHLEQLGVRLTKLNQKQADYLGVPINGPFKPDHYRY 436
[Close]
BLAST of CX288696 vs. ExPASy Swiss-Prot
Match: SAHH_LEPIC (Adenosylhomocysteinase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=ahcY PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.943e-47
Identity = 96/161 (59.63%), Postives = 114/161 (70.81%), Query Frame = 2 
Query:    8 TRNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 490
            T N DII ++HMK MK+ AI+CNIGHFD EI M  L    GV +  IKPQ D++ FP+  S IIVLAEGRL+NLGCATGHPSFVMSCSFTNQV+AQ+EL+      KYE  VY LPKHLDEKV            T+L ++QADY+ V  +GP+KP HYRY
Sbjct:  281 TGNDDIITLEHMKAMKDGAILCNIGHFDTEIQMSRLNNEKGVTKKEIKPQVDKYTFPDGKS-IIVLAEGRLVNLGCATGHPSFVMSCSFTNQVLAQIELY----NNKYELGVYTLPKHLDEKVAALHLEQLGVRLTKLNQKQADYLGVPINGPFKPDHYRY 436
[Close]
BLAST of CX288696 vs. ExPASy Swiss-Prot
Match: SAHH_MYCSS (Adenosylhomocysteinase OS=Mycobacterium sp. (strain MCS) GN=ahcY PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.315e-47
Identity = 98/161 (60.87%), Postives = 116/161 (72.05%), Query Frame = 2 
Query:    8 TRNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 490
            T NKDII +DHMK MK+ AI+ NIGHFDNEIDM  LE   G  RI IKPQ D W F + +S I++L+EGRL+NLG ATGHPSFVMS SF+NQVIAQ+ELW +    +Y+  VY L KHLDEKV            T+LTKEQA+YI+V  +GPYKP HYRY
Sbjct:  333 TGNKDIITLDHMKAMKDKAILGNIGHFDNEIDMAALER-SGATRINIKPQVDEWTFDDGHS-IVLLSEGRLLNLGNATGHPSFVMSNSFSNQVIAQIELWTKND--EYDNAVYRLAKHLDEKVARIHVEALGGTLTKLTKEQAEYINVDVEGPYKPEHYRY 489
[Close]
BLAST of CX288696 vs. ExPASy Swiss-Prot
Match: SAHH_MYCSK (Adenosylhomocysteinase OS=Mycobacterium sp. (strain KMS) GN=ahcY PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.315e-47
Identity = 98/161 (60.87%), Postives = 116/161 (72.05%), Query Frame = 2 
Query:    8 TRNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 490
            T NKDII +DHMK MK+ AI+ NIGHFDNEIDM  LE   G  RI IKPQ D W F + +S I++L+EGRL+NLG ATGHPSFVMS SF+NQVIAQ+ELW +    +Y+  VY L KHLDEKV            T+LTKEQA+YI+V  +GPYKP HYRY
Sbjct:  333 TGNKDIITLDHMKAMKDKAILGNIGHFDNEIDMAALER-SGATRINIKPQVDEWTFDDGHS-IVLLSEGRLLNLGNATGHPSFVMSNSFSNQVIAQIELWTKND--EYDNAVYRLAKHLDEKVARIHVEALGGTLTKLTKEQAEYINVDVEGPYKPEHYRY 489
[Close]
BLAST of CX288696 vs. ExPASy Swiss-Prot
Match: SAHH_MYCPA (Adenosylhomocysteinase OS=Mycobacterium paratuberculosis GN=ahcY PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.329e-47
Identity = 96/161 (59.63%), Postives = 114/161 (70.81%), Query Frame = 2 
Query:    8 TRNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 490
            T NKDII ++HMK MK+ AI+ NIGHFDNEI +  LE    +K   I+PQ D W FP+T   IIVL+EGRL+NLG ATGHPSFVMS SF+NQVIAQ+ELW +    +Y+ +VY LPKHLDEKV            T+LTKEQA+YI V  DGPYK  HYRY
Sbjct:  339 TGNKDIITLEHMKAMKDKAILGNIGHFDNEIQIARLEKSGAIKT-NIRPQVDLWTFPDTGKSIIVLSEGRLLNLGNATGHPSFVMSNSFSNQVIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGELTKLTKEQAEYIGVDVDGPYKADHYRY 496
[Close]
BLAST of CX288696 vs. ExPASy Swiss-Prot
Match: SAHH_CHLTE (Adenosylhomocysteinase OS=Chlorobium tepidum GN=ahcY PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 5.654e-47
Identity = 95/161 (59.01%), Postives = 114/161 (70.81%), Query Frame = 2 
Query:    8 TRNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 490
            T NKD+I +DH+K+M++ AIVCNIGHFDNEI +  L  + G  RI IKPQ D++VF E  + I +LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELW+      Y+  VY LPK LDE+V            T LTKEQADYI V  +GPYKP HYRY
Sbjct:  316 TGNKDVITLDHIKQMRDEAIVCNIGHFDNEIQVDALNNFKGATRINIKPQVDKYVF-ENGNCIYLLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELWQ----NDYKVGVYRLPKKLDEEVARLHLGQIGAKLTTLTKEQADYIGVPVEGPYKPEHYRY 471
[Close]
BLAST of CX288696 vs. ExPASy Swiss-Prot
Match: SAHH_TRIVA (Adenosylhomocysteinase OS=Trichomonas vaginalis PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 7.385e-47
Identity = 96/161 (59.63%), Postives = 118/161 (73.29%), Query Frame = 2 
Query:    8 TRNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 490
            T N DII VD M +MK+ AIV NIGHFDNEID  GL  YPG+K I IKP+ D W FP+ ++ I++LAEGRL+NLGCATGHPSFVMS SFTNQ +AQL+L++++  G  E KVY LPKHLDE+V            T+LT++QADYI+V  +GPYK   YRY
Sbjct:  329 TGNCDIISVDMMAQMKDKAIVGNIGHFDNEIDTDGLMKYPGIKHIPIKPEYDMWEFPDGHA-ILLLAEGRLLNLGCATGHPSFVMSMSFTNQTLAQLDLYEKR--GNLEMKVYTLPKHLDEEVVRLHLGSLDVHLTKLTQKQADYINVPVEGPYKSDAYRY 486
The following BLAST results are available for this feature:
BLAST of CX288696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
SAHH_MYCLB8.724e-4859.01Adenosylhomocysteinase OS=Mycobacterium leprae (st... [more]
SAHH_CHLCH8.724e-4860.25Adenosylhomocysteinase OS=Chlorobium chlorochromat... [more]
SAHH_MYCSJ1.488e-4761.49Adenosylhomocysteinase OS=Mycobacterium sp. (strai... [more]
SAHH_LEPIN1.943e-4759.63Adenosylhomocysteinase OS=Leptospira interrogans G... [more]
SAHH_LEPIC1.943e-4759.63Adenosylhomocysteinase OS=Leptospira interrogans s... [more]
SAHH_MYCSS3.315e-4760.87Adenosylhomocysteinase OS=Mycobacterium sp. (strai... [more]
SAHH_MYCSK3.315e-4760.87Adenosylhomocysteinase OS=Mycobacterium sp. (strai... [more]
SAHH_MYCPA4.329e-4759.63Adenosylhomocysteinase OS=Mycobacterium paratuberc... [more]
SAHH_CHLTE5.654e-4759.01Adenosylhomocysteinase OS=Chlorobium tepidum GN=ah... [more]
SAHH_TRIVA7.385e-4759.63Adenosylhomocysteinase OS=Trichomonas vaginalis PE... [more]

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Properties
Property NameValue
Genbank descriptionC02003D02SK IF1 Citrus clementina cDNA clone C02003D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288696 ID=CX288696; Name=CX288696; organism=Citrus clementina; type=EST; length=612bp
ATTCGGCACGAGGAACAAGGACATCATCATGGTTGACCACATGAAGAAGA
TGAAGAACAATGCAATTGTTTGCAACATTGGTCACTTTGATAATGAAATT
GATATGCTCGGTCTTGAGACCTACCCGGGTGTTAAGCGCATTACCATCAA
GCCCCAAACTGATAGGTGGGTCTTCCCGGAGACCAACTCAGGCATCATCG
TGTTGGCTGAGGGACGTCTCATGAACTTGGGATGTGCCACTGGACACCCC
AGCTTTGTGATGTCCTGCTCCTTCACCAACCAGGTGATTGCCCAGCTTGA
GCTCTGGAAGGAGAAGAGCACCGGCAAGTACGAGAAGAAGGTGTACGTTC
TGCCCAAGCACCTCGATGAAAAGGTTGCTGCTCTTCACCTTGGCAAACTT
GGAGCTAAGCTCACCAGGCTCACCAAGGAGCAGGCTGACTACATCAGTGT
GTCCGCCGATGGTCCTTACAAGCCTCTTCACTACAGGTACTAAGTGGAAG
AAGAAGAAGAAGAAGAAGAAGAGTGAATGTTTTGAGGGAAAGAAACAAAA
TATTTGGCCGGCTTGATTGTTTTCAATGATGATCTGTAGTAGGATGTTAG
GTTTAAATTTCG
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