CX288704
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC4_MAIZE (Superoxide dismutase [Cu-Zn] 4A OS=Zea mays GN=SODCC.3 PE=2 SV=2) HSP 1 Score: 183.341 bits (464), Expect = 7.455e-46 Identity = 89/152 (58.55%), Postives = 106/152 (69.74%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQ 542 VKAVA + S G KG + F QEGDGPTT+ G++ L G HGFH+H GD + C STG H+NP K+HG PED RHAGDLGN+ G DG A IN+ D IPL GPNSIIGR+VV+H DDLGK G+ SK GNAG ++ACG+IGLQ Sbjct: 2 VKAVAVLGSSEGVKGTIFFTQEGDGPTTVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPASKEHGAPEDENRHAGDLGNVTAGADGVANINVTDSQ--IPLTGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGLQ 151
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_ANACO (Superoxide dismutase [Cu-Zn] OS=Ananas comosus GN=SOD1 PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.169e-45 Identity = 89/152 (58.55%), Postives = 106/152 (69.74%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQ 542 VKAVA + S G KG ++F QEGDGPTT+ G++ L G HGFH+H GD + C STG HFNP +HG PED RHAGDLGN+ VG DG +NIVD IPL G NSIIGR+VV+H DDLGK G+ SK GNAG ++ACG+IGLQ Sbjct: 2 VKAVAVLGSSEGVKGTIYFTQEGDGPTTVTGSISGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGNEHGAPEDETRHAGDLGNVTVGEDGTVNVNIVDSQ--IPLSGSNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQ 151
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC5_MAIZE (Superoxide dismutase [Cu-Zn] 4AP OS=Zea mays GN=SODCC.2 PE=2 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 3.700e-45 Identity = 88/152 (57.89%), Postives = 105/152 (69.08%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQ 542 VKAVA + S G KG + F QEGDGPT + G++ L G HGFH+H GD + C STG H+NP K+HG PED RHAGDLGN+ G DG A IN+ D IPL GPNSIIGR+VV+H DDLGK G+ SK GNAG ++ACG+IGLQ Sbjct: 2 VKAVAVLGSSDGVKGTIFFTQEGDGPTAVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPASKEHGAPEDENRHAGDLGNVTAGADGVANINVTDSQ--IPLTGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGLQ 151
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC1_ORYSJ (Superoxide dismutase [Cu-Zn] 1 OS=Oryza sativa subsp. japonica GN=SODCC1 PE=1 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 4.832e-45 Identity = 89/152 (58.55%), Postives = 106/152 (69.74%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQ 542 VKAV + S KG +HF QEGDGPTT+ G++ L G HGFHIH GD + C STG H+NP K+HG PED RHAGDLGN+ G DG A I++VD IPL GPNSIIGR+VV+H DDLGK G+ SK GNAG ++ACG+IGLQ Sbjct: 2 VKAVVVLGSSEIVKGTIHFVQEGDGPTTVTGSVSGLKPGLHGFHIHALGDTTNGCMSTGPHYNPAGKEHGAPEDETRHAGDLGNVTAGEDGVANIHVVDSQ--IPLTGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQ 151
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC1_ORYSI (Superoxide dismutase [Cu-Zn] 1 OS=Oryza sativa subsp. indica GN=SODCC1 PE=2 SV=2) HSP 1 Score: 180.644 bits (457), Expect = 4.832e-45 Identity = 89/152 (58.55%), Postives = 106/152 (69.74%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQ 542 VKAV + S KG +HF QEGDGPTT+ G++ L G HGFHIH GD + C STG H+NP K+HG PED RHAGDLGN+ G DG A I++VD IPL GPNSIIGR+VV+H DDLGK G+ SK GNAG ++ACG+IGLQ Sbjct: 2 VKAVVVLGSSEIVKGTIHFVQEGDGPTTVTGSVSGLKPGLHGFHIHALGDTTNGCMSTGPHYNPAGKEHGAPEDETRHAGDLGNVTAGEDGVANIHVVDSQ--IPLTGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQ 151
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_CARPA (Superoxide dismutase [Cu-Zn] OS=Carica papaya GN=SODCC PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 8.242e-45 Identity = 88/152 (57.89%), Postives = 104/152 (68.42%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQ 542 VKAVA + S G G + F Q DGPTT+ G + L G HGFH+H GD + C STG HFNP K+HG PED IRHAGDLGN+ VG DGK +I+D IPL GPNSI+GR+VV+H DDLGK G+ SK GNAG ++ACGVIGLQ Sbjct: 2 VKAVAVLSSSEGVSGTIFFTQAADGPTTVTGEISGLKPGHHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDIRHAGDLGNVNVGDDGKVSFSIIDSQ--IPLTGPNSIVGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGVIGLQ 151
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_PANGI (Superoxide dismutase [Cu-Zn] OS=Panax ginseng GN=SODCC PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 2.398e-44 Identity = 87/152 (57.24%), Postives = 104/152 (68.42%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQ 542 VKAV + G G++HF QE DGPTT+ G L L+ G HGFH+H GD + C STG H+NP K+HG PED RHAGDLGN+ VG DG A+ IVDK IPL+G SIIGR+VV+H DDLGK G+ SK GNAG ++ACG IGLQ Sbjct: 2 VKAVTVLSGSGGVSGVIHFTQEEDGPTTVTGKLSGLAPGLHGFHVHALGDTTNGCLSTGPHYNPANKEHGAPEDETRHAGDLGNVTVGEDGTAEFTIVDKQ--IPLIGSGSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRLACGFIGLQ 151
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_SPIOL (Superoxide dismutase [Cu-Zn] OS=Spinacia oleracea GN=SODCC PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 3.132e-44 Identity = 85/151 (56.29%), Postives = 105/151 (69.54%), Query Frame = 3 Query: 90 KAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQ 542 KAV + S G G ++F QEGDGPTT+ G + L G HGFH+H GD + C STG H+NP K+HG PED +RHAGDLGNI VG DG A I+D IPL GPNSI+GR+VV+H + DDLG+ G+ SK GNAG ++ACG+IGLQ Sbjct: 3 KAVVVLSSSEGVSGTVYFAQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPNGKEHGAPEDDVRHAGDLGNITVGDDGTATFTIIDSQ--IPLSGPNSIVGRAVVVHAEPDDLGRGGHELSKTTGNAGGRVACGIIGLQ 151
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_PAUKA (Superoxide dismutase [Cu-Zn] OS=Paulownia kawakamii GN=SODCC PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 5.343e-44 Identity = 86/152 (56.58%), Postives = 104/152 (68.42%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQ 542 VK VA + S G G ++F QEGDGPTT+ G + L G HGFH+H GD + C STG HFNP K+HG P+D +RHAGDLGN+ VG DG A IVDK IPL GP+SIIGR+VV+H DDLGK G+ SK GN G ++ACG+ GLQ Sbjct: 2 VKGVAVLSSSEGVSGTIYFTQEGDGPTTVTGNVSGLKPGPHGFHVHALGDTTNGCLSTGPHFNPAGKEHGAPDDEVRHAGDLGNVTVGEDGTAAFTIVDKQ--IPLTGPHSIIGRAVVVHADPDDLGKGGHELSKTTGNTGGRVACGINGLQ 151
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_NICPL (Superoxide dismutase [Cu-Zn] OS=Nicotiana plumbaginifolia GN=SODCC PE=2 SV=2) HSP 1 Score: 177.178 bits (448), Expect = 5.343e-44 Identity = 86/152 (56.58%), Postives = 103/152 (67.76%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQ 542 VKAVA + S G G + F Q+GD PTT+ G + L G HGFH+H GD + C STG H+NP K+HG PED +RHAGDLGNI VG DG A + DK IPL GP SIIGR+VV+H DDLGK G+ SK GNAG ++ACG+IGLQ Sbjct: 2 VKAVAVLSSSEGVSGTIFFTQDGDAPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTLTDKQ--IPLAGPQSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQ 151 The following BLAST results are available for this feature:
BLAST of CX288704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288704 ID=CX288704; Name=CX288704; organism=Citrus clementina; type=EST; length=589bpback to top |