CX288704
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_IPOBA (Superoxide dismutase [Cu-Zn] OS=Ipomoea batatas GN=SODCC PE=2 SV=2) HSP 1 Score: 177.178 bits (448), Expect = 5.343e-44 Identity = 88/152 (57.89%), Postives = 102/152 (67.11%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQ 542 VKAVA + S G G + F QEGDGPTT+ G + L G HGFH+H GD + C STG HFNP K+HG P D RHAGDLGNI VG DG A I DK IPL G NS+IGR+VV+H DDLGK G+ SK GNAG ++ACG+IGLQ Sbjct: 2 VKAVAVLSSSEGVSGTIFFSQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPGDDNRHAGDLGNITVGEDGTASFTITDKQ--IPLTGANSVIGRAVVVHGDPDDLGKGGHELSKSTGNAGGRVACGIIGLQ 151
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC2_ORYSJ (Superoxide dismutase [Cu-Zn] 2 OS=Oryza sativa subsp. japonica GN=SODCC2 PE=1 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 6.978e-44 Identity = 86/152 (56.58%), Postives = 105/152 (69.08%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQ 542 VKAVA + S G KG + F QEGDGPT++ G++ L G HGFH+H GD + C STG HFNP K+HG P+D RHAGDLGNI G DG A +N+ D IPL G +SIIGR+VV+H DDLGK G+ SK GNAG ++ACG+IGLQ Sbjct: 2 VKAVAVLASSEGVKGTIFFSQEGDGPTSVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPTGKEHGAPQDENRHAGDLGNITAGADGVANVNVSDSQ--IPLTGAHSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQ 151
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC1_MESCR (Superoxide dismutase [Cu-Zn] 1 OS=Mesembryanthemum crystallinum GN=SODCC.1 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 6.978e-44 Identity = 87/152 (57.24%), Postives = 102/152 (67.11%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQ 542 VKAV + S G G + F QEG GPTT+ G + L G HGFH+H GD + C STG HFNP K+HG PED RHAGDLGNI VG DG A I+D IPL GPNSI+GR+VV+H DDLG+ G+ SK GNAG ++ACGVIGLQ Sbjct: 2 VKAVVVLSSSEGVSGTVQFTQEGSGPTTVTGNVSGLRPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDETRHAGDLGNITVGDDGTATFTIIDSQ--IPLTGPNSIVGRAVVVHADPDDLGRGGHELSKATGNAGGRVACGVIGLQ 151
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_PEA (Superoxide dismutase [Cu-Zn] OS=Pisum sativum GN=SODCC PE=2 SV=2) HSP 1 Score: 176.407 bits (446), Expect = 9.113e-44 Identity = 89/152 (58.55%), Postives = 103/152 (67.76%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQ 542 VKAVA + + G ++F QEG+GPTT+ GTL L G HGFHIH GD + C STG HFNP K+HG PED RHAGDLGNI VG DG I D H IPL G NSIIGR+VV+H DDLGK G+ SK GNAG ++ACG+IGLQ Sbjct: 2 VKAVAVLSNSNEVSGTINFSQEGNGPTTVTGTLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGAPEDETRHAGDLGNINVGDDGTVSFTITDNH--IPLTGTNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQ 151
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC2_MAIZE (Superoxide dismutase [Cu-Zn] 2 OS=Zea mays GN=SODCC.1 PE=2 SV=2) HSP 1 Score: 176.407 bits (446), Expect = 9.113e-44 Identity = 87/152 (57.24%), Postives = 105/152 (69.08%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQ 542 VKAVA V++ KG + F QEGDGPTT+ G++ L G HGFH+H GD + C STG HFNP K+HG PED RHAGDLGN+ G DG +NI D IPL GP+SIIGR+VV+H DDLGK G+ SK GNAG ++ACG+IGLQ Sbjct: 2 VKAVA-VLAGTDVKGTIFFSQEGDGPTTVTGSISGLKPGLHGFHVHALGDTTNGCMSTGPHFNPVGKEHGAPEDEDRHAGDLGNVTAGEDGVVNVNITDSQ--IPLAGPHSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGLQ 150
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_ZANAE (Superoxide dismutase [Cu-Zn] OS=Zantedeschia aethiopica GN=SODCC PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.030e-43 Identity = 86/153 (56.21%), Postives = 103/153 (67.32%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQA 545 VKAVA + G +G + F QEG+GPTTI G+L L G HGFH+H GD + C STG HFNP K+HG PED RHAGDLGN+ VG DG + D IPL G NS++GR+VV+H DDLGK G+ SK GNAG ++ACGVIGLQA Sbjct: 2 VKAVAVLTGSEGVQGTVFFAQEGEGPTTITGSLSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDGNRHAGDLGNVTVGEDGTVNFTVTDSQ--IPLTGLNSVVGRAVVVHADSDDLGKGGHELSKTTGNAGGRLACGVIGLQA 152
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_SOYBN (Superoxide dismutase [Cu-Zn] OS=Glycine max GN=SOD1 PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.030e-43 Identity = 87/152 (57.24%), Postives = 103/152 (67.76%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQ 542 VKAVA + S G G + F QEG+GPTT+ G+L L G HGFH+H GD + C STG HFNP +HG PED RHAGDLGN+ VG DG +I D IPL GPNSIIGR+VV+H DDLGK G+ SK GNAG ++ACG+IGLQ Sbjct: 2 VKAVAVLGSSEGVTGTIFFTQEGNGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGAHFNPNNNEHGAPEDENRHAGDLGNVNVGDDGTVSFSITDSQ--IPLTGPNSIIGRAVVVHADSDDLGKGGHELSKTTGNAGGRVACGIIGLQ 151
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC2_SOLLC (Superoxide dismutase [Cu-Zn] 2 OS=Solanum lycopersicum GN=SODCC.5 PE=3 SV=3) HSP 1 Score: 175.252 bits (443), Expect = 2.030e-43 Identity = 87/152 (57.24%), Postives = 102/152 (67.11%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQ 542 VKAVA + S G G + F Q+G PTT+ G + L G HGFH+H GD + C STG H+NP K+HG PED +RHAGDLGNI VG DG A I DK IPL GP SIIGR+VV+H DDLGK G+ SK GNAG +IACG+IGLQ Sbjct: 2 VKAVAVLNSSEGVSGTILFTQDGAAPTTVNGNISGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTITDKQ--IPLTGPQSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRIACGIIGLQ 151
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_SOLCS (Superoxide dismutase [Cu-Zn] OS=Solidago canadensis var. scabra GN=SODCC PE=2 SV=3) HSP 1 Score: 173.711 bits (439), Expect = 5.907e-43 Identity = 88/153 (57.52%), Postives = 104/153 (67.97%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDG-PTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQ 542 VKAVA + S G G + F QE +G PTT+ G L L G HGFH+H GD + C STG H+NP KDHG P+D RHAGDLGN+ VG DG AK IVDK IPL+G SIIGR+VV+H DDLGK G+ SK GNAG ++ACG+IGLQ Sbjct: 2 VKAVAVLSSSEGVSGTIFFSQEAEGAPTTVTGDLSGLKPGPHGFHVHALGDTTNGCMSTGPHYNPHGKDHGAPDDEHRHAGDLGNVTVGEDGTAKFTIVDKQ--IPLIGAQSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQ 152
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_PINSY (Superoxide dismutase [Cu-Zn] OS=Pinus sylvestris GN=SODCC PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 1.719e-42 Identity = 83/152 (54.61%), Postives = 103/152 (67.76%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQ 542 +KAV + KG++ F QEGDGPTT+ G + LS G HGFH+H GD + C STG HFNP K+HG P D RHAGDLGN+ VG DG + +I D IPL GP+SI+GR+VV+H DDLGK G+ SK GNAG ++ACGV+GLQ Sbjct: 4 LKAVVVLNGAADVKGVVQFTQEGDGPTTVTGKISGLSPGLHGFHVHALGDTTNGCMSTGPHFNPLGKEHGAPTDDNRHAGDLGNVTVGTDGTVEFSITDSQ--IPLSGPHSIVGRAVVVHADPDDLGKGGHELSKSTGNAGGRLACGVVGLQ 153 The following BLAST results are available for this feature:
BLAST of CX288704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288704 ID=CX288704; Name=CX288704; organism=Citrus clementina; type=EST; length=589bpback to top |