CX288704
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_CANAL (Superoxide dismutase [Cu-Zn] OS=Candida albicans GN=SOD1 PE=3 SV=3) HSP 1 Score: 129.413 bits (324), Expect = 1.278e-29 Identity = 76/153 (49.67%), Postives = 92/153 (60.13%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDG-PTTIKGTLYYLSQGA-HGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 VKAVA V +G +HF+QE + PTTI + A GFHIH +GD + C S G HFNPF K HG PED RH GDLGNI +G AK D LI L+G +SI+GR++V+H DD GK G SK G+AG + ACGVIGL Sbjct: 2 VKAVAVVRGDSKVQGTVHFEQESESAPTTISWEIEGNDPNALRGFHIHQFGDNTNGCTSAGPHFNPFGKQHGAPEDDERHVGDLGNISTDGNGVAKGTKQD--LLIKLIGKDSILGRTIVVHAGTDDYGKGGFEDSKTTGHAGARPACGVIGL 152
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_ASPNG (Superoxide dismutase [Cu-Zn] OS=Aspergillus niger GN=sodC PE=1 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.278e-29 Identity = 70/155 (45.16%), Postives = 93/155 (60.00%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDG-PTTIKGTLY-YLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQA 545 VKAVA + G + F+Q + PTTI + + + GFH+H +GD + C S G HFNP+ K HG PED RH GDLGN +G A + D KL+ L+G S++GR++V+H DDLG+ GN SKK GNAG + ACGVIG+ A Sbjct: 2 VKAVAVIRGDSKVSGTVTFEQANENTPTTISWNITGHDANAERGFHVHQFGDNTNGCTSAGPHFNPYGKTHGAPEDDERHVGDLGNFKTDAEGNAVGSKQD--KLVKLIGAESVLGRTLVVHAGTDDLGRGGNEESKKTGNAGPRPACGVIGIAA 154
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_BOTFU (Superoxide dismutase [Cu-Zn] OS=Botryotinia fuckeliana GN=sod1 PE=3 SV=3) HSP 1 Score: 129.028 bits (323), Expect = 1.669e-29 Identity = 73/155 (47.10%), Postives = 90/155 (58.06%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAH-GFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQA 545 VKAVA V G + F+Q E + PTTI + A G H+H +GD + C S G HFNP + HG P D +RH GDLGN G A ++ D H I L+GP S+IGR+VV+H DDLGK N SKK GNAG + ACGVIG+ A Sbjct: 2 VKAVATVRGDSKISGTVTFEQSEENSPTTITWNITGNDANAERGMHVHQFGDNTNGCTSAGPHFNPHGQTHGAPTDEVRHVGDLGNFKTDAQGNATGSVQDSH--IKLIGPLSVIGRTVVVHSGTDDLGKGENEESKKTGNAGTRPACGVIGIAA 154
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_ASPFU (Superoxide dismutase [Cu-Zn] OS=Aspergillus fumigatus GN=sodC PE=2 SV=3) HSP 1 Score: 127.487 bits (319), Expect = 4.855e-29 Identity = 71/155 (45.81%), Postives = 93/155 (60.00%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGA-HGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQA 545 VKAVA + G + F+Q + + PTT+ + A GFH+H +GD + C S G HFNP+ K HG PED RH GDLGN +G A + D KLI L+G S++GR++V+H DDLG+ GN SKK GNAG + ACGVIG+ A Sbjct: 2 VKAVAVLRGDSKITGTVTFEQADENSPTTVSWNIKGNDPNAKRGFHVHQFGDNTNGCTSAGPHFNPYGKTHGAPEDSERHVGDLGNFETDAEGNAVGSKQD--KLIKLIGAESVLGRTLVVHAGTDDLGRGGNEESKKTGNAGARPACGVIGIAA 154
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_EMENI (Superoxide dismutase [Cu-Zn] OS=Emericella nidulans GN=sodA PE=1 SV=3) HSP 1 Score: 126.331 bits (316), Expect = 1.082e-28 Identity = 70/155 (45.16%), Postives = 92/155 (59.35%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDGP-TTIKGTLYYLSQGAH-GFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQA 545 VKAVA + G + F+Q + TT+ + A GFHIH +GD + C S G HFNPF K HG PED +RH GDLGN +G +K + D KLI L+G S++GR++V+H DDLG+ + SKK GNAG + ACGVIG+ A Sbjct: 2 VKAVAVLRGDSKVSGTVTFEQADENSNTTVSWNITGNDPNAERGFHIHQFGDNTNGCTSAGPHFNPFGKTHGAPEDEVRHVGDLGNFKTDAEGNSKGSKTD--KLIKLIGAESVLGRTLVVHAGTDDLGRGDSEESKKTGNAGARPACGVIGIAA 154
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_PODAN (Superoxide dismutase [Cu-Zn] OS=Podospora anserina GN=SOD1 PE=3 SV=3) HSP 1 Score: 125.946 bits (315), Expect = 1.412e-28 Identity = 73/155 (47.10%), Postives = 89/155 (57.42%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGD-GPTTIKGTLY-YLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQA 545 VKAVA V G + F+QE + GPTTI + + + G HIH +GD + C S G HFNP K HG D RH GDLGNI G +K + D LI L+GP S+IGR+VV+H DDLGK S K GNAG + ACGVIG+ A Sbjct: 2 VKAVAVVRGDSKVSGSVVFEQETENGPTTITWDITGHDANAKRGMHIHTFGDNTNGCTSAGPHFNPHGKTHGNRTDENRHVGDLGNIETDAQGNSKGTVTD--NLIKLIGPESVIGRTVVVHAGTDDLGKGDTEESLKTGNAGARPACGVIGISA 154
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_ASPOR (Superoxide dismutase [Cu-Zn] OS=Aspergillus oryzae GN=sodC PE=3 SV=3) HSP 1 Score: 124.405 bits (311), Expect = 4.110e-28 Identity = 69/155 (44.52%), Postives = 93/155 (60.00%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLY-YLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQA 545 VKAVA + G + F+Q + + PTT+ + + + FH+H +GD + C S G HFNPF K+HG PED RH GDLGN +G A + D KLI L+G S++GR++VIH DDLG+ + SKK GNAG + ACGVIG+ A Sbjct: 2 VKAVAVLRGDSKISGTVTFEQADANAPTTVSWNITGHDANAERAFHVHQFGDNTNGCTSAGPHFNPFGKEHGAPEDENRHVGDLGNFKTDAEGNAVGSKQD--KLIKLIGAESVLGRTLVIHAGTDDLGRSEHPESKKTGNAGARPACGVIGIAA 154
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: CCS_RAT (Copper chaperone for superoxide dismutase OS=Rattus norvegicus GN=Ccs PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 9.155e-28 Identity = 63/151 (41.72%), Postives = 86/151 (56.95%), Query Frame = 3 Query: 93 AVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQA 545 AVA + +G++ F Q I+GT+ L G HG H+H YGD+ C S GDHFNP HGGP+D RH GDLGN++ G+A I DK + +IGRS+V+ + DDLG+ G+ SK GN+G ++ACG+I A Sbjct: 89 AVAIMEGSGTVQGVVRFLQLSSELCLIEGTIDGLEPGLHGLHVHQYGDLTKDCSSCGDHFNPDGASHGGPQDTDRHRGDLGNVHAEASGRATFRIEDKQLKV-----WDVIGRSLVVDEGEDDLGRGGHPLSKVTGNSGKRLACGIIARSA 234
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_NPVOP (Putative superoxide dismutase [Cu-Zn] OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=SOD PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.196e-27 Identity = 67/155 (43.23%), Postives = 94/155 (60.65%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEG-DGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNI-YVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQA 545 +KA+ V + G ++FKQ D P +I G L L +G HGFH+H +GD ++ C S G+HFNP R+ HG P+ RH GDLGN+ G I++ D +I L GP SI+GRS+V+H DDLG + SK GN+G ++ CG+IG+ A Sbjct: 1 MKAICIVAGE--ASGRIYFKQGAPDEPVSITGYLLNLPRGLHGFHVHEFGDTSNGCTSAGEHFNPTRQRHGAPDAAERHVGDLGNVRSAGCTALTAIHMSD--NVITLFGPLSILGRSLVVHTDRDDLGLGEHPLSKTTGNSGGRLGCGIIGVCA 151
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODE_CAEEL (Extracellular superoxide dismutase [Cu-Zn] OS=Caenorhabditis elegans GN=sod-4 PE=1 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 2.040e-27 Identity = 69/156 (44.23%), Postives = 88/156 (56.41%), Query Frame = 3 Query: 87 VKAVAYVISKWGPK------GILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIG 536 ++A AY+ K G + F Q G + G++ L+ G HGFHIH GD + C S G H+NP + HG P+D RH GDLGNI G I++ D L L G SIIGRSVVIH+K DDLG+ + SK GNAG ++ACG IG Sbjct: 22 IRARAYIFKAEAGKIPTELIGTIDFDQSGSF-LKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHGAPDDSNRHIGDLGNIESPASGDTLISVSD--SLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQSKTTGNAGSRLACGTIG 174 The following BLAST results are available for this feature:
BLAST of CX288704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288704 ID=CX288704; Name=CX288704; organism=Citrus clementina; type=EST; length=589bpback to top |