CX288704
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_DROMD (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila madeirensis GN=Sod PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.507e-22 Identity = 50/108 (46.30%), Postives = 68/108 (62.96%), Query Frame = 3 Query: 126 KGILHFKQE-GDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIH 446 KGI+ F+QE + P + G + L++G HGFH+H +GD + C S+G H+NP K+HG P D RH GDLGNI D ++I D I L G +SIIGR+VV+H Sbjct: 6 KGIVFFEQETSEAPVKVTGEVLGLAKGLHGFHVHEFGDNTNGCMSSGPHYNPRNKEHGAPTDENRHLGDLGNIQAAGDSPTAVSITDSK--ITLFGADSIIGRTVVVH 111
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_DROTO (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila tolteca GN=Sod PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 9.804e-22 Identity = 50/108 (46.30%), Postives = 67/108 (62.04%), Query Frame = 3 Query: 126 KGILHFKQE-GDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIH 446 KG + F+QE + P + G + L++G HGFH+H +G+ + C S+G HFNP K+HG P D RH GDLGNI D ++I D I L G NSIIGR+VV+H Sbjct: 6 KGTVFFEQETSEAPVKVTGEVLGLTKGLHGFHVHEFGNNTNGCMSSGPHFNPGNKEHGAPTDGNRHLGDLGNIQAAGDSPTAVSITDSK--ITLFGANSIIGRTVVVH 111
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_DROOB (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila obscura GN=Sod PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.672e-21 Identity = 50/108 (46.30%), Postives = 67/108 (62.04%), Query Frame = 3 Query: 126 KGILHFKQE-GDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIH 446 KG + F+QE + P + G + L++G HGFH+H +GD + C S+G HFNP K+HG P D RH GDLGNI D ++I D I L G +SIIGR+VV+H Sbjct: 6 KGTVFFEQETSEAPVKVTGEVLGLTKGLHGFHVHEFGDNTNGCMSSGPHFNPRSKEHGAPTDENRHLGDLGNIQAAGDSPTAVSITDSK--ITLFGADSIIGRTVVVH 111
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODE_SCHMA (Extracellular superoxide dismutase [Cu-Zn] OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.726e-21 Identity = 59/141 (41.84%), Postives = 80/141 (56.74%), Query Frame = 3 Query: 129 GILHFKQEGDGPTTIKGTLYYLSQGAH-GFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGP-NSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQA 545 G + F Q GD + G++ L G G H+H YG + + C G HFNPF + HG + RHAGDLGNI VG G AK D + I +GP + IGR++VIH DDLG+ + S+ GN+G ++AC IG +A Sbjct: 47 GAVWFTQHGDY-MYVNGSVAGLPPGKLLGTHVHRYGGLGNMCLEAGPHFNPFNQRHGPRHGYPRHAGDLGNIRVGRGGVAKF---DFYVTIKGLGPFDGFIGRALVIHANRDDLGRNRDEGSRTTGNSGPRLACATIGFRA 183
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_DROPE (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila persimilis GN=Sod PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.866e-21 Identity = 50/108 (46.30%), Postives = 66/108 (61.11%), Query Frame = 3 Query: 126 KGILHFKQE-GDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIH 446 KG + F+QE + P + G L++G HGFH+H +GD + C S+G HFNP K+HG P D RH GDLGNI D ++I D I L G +SIIGR+VV+H Sbjct: 6 KGTVFFEQETSEAPVKVTGEGLGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPRNKEHGAPTDENRHLGDLGNIQAAGDSPTAVSITDSK--ITLFGADSIIGRTVVVH 111
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_DROPB (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila pseudoobscura bogotana GN=Sod PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.866e-21 Identity = 50/108 (46.30%), Postives = 66/108 (61.11%), Query Frame = 3 Query: 126 KGILHFKQE-GDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIH 446 KG + F+QE + P + G L++G HGFH+H +GD + C S+G HFNP K+HG P D RH GDLGNI D ++I D I L G +SIIGR+VV+H Sbjct: 6 KGTVFFEQETSEAPVKVTGEGLGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPRNKEHGAPTDENRHLGDLGNIQAAGDSPTAVSITDSK--ITLFGADSIIGRTVVVH 111
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_DROMI (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila miranda GN=Sod PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.866e-21 Identity = 50/108 (46.30%), Postives = 66/108 (61.11%), Query Frame = 3 Query: 126 KGILHFKQE-GDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIH 446 KG + F+QE + P + G L++G HGFH+H +GD + C S+G HFNP K+HG P D RH GDLGNI D ++I D I L G +SIIGR+VV+H Sbjct: 6 KGTVFFEQETSEAPVKVTGEGLGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPRNKEHGAPTDENRHLGDLGNIQAAGDSPTAVSITDSK--ITLFGADSIIGRTVVVH 111
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODE_RAT (Extracellular superoxide dismutase [Cu-Zn] OS=Rattus norvegicus GN=Sod3 PE=1 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 2.670e-19 Identity = 55/144 (38.19%), Postives = 81/144 (56.25%), Query Frame = 3 Query: 129 GILHFKQEG-----DGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKL---IPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIG 536 G++ F+Q G + ++G + H H+H +GD++ C+STG H+NP H +H GD GN V DG+ + KH++ L GP+SI+GR+VV+H DDLGK GN S +NGNAG ++AC V+G Sbjct: 87 GLVLFRQLGPSSRLEASFNLEGFPAEQNTSNHAIHVHEFGDLSQGCESTGPHYNPLGVPHP------QHPGDFGNFVVR-DGR-----LWKHRMGLATSLAGPHSILGRAVVVHAGEDDLGKGGNQASVQNGNAGRRLACCVVG 218
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODE_MOUSE (Extracellular superoxide dismutase [Cu-Zn] OS=Mus musculus GN=Sod3 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.576e-18 Identity = 52/144 (36.11%), Postives = 78/144 (54.17%), Query Frame = 3 Query: 129 GILHFKQEGDGPT-----TIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKL---IPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIG 536 G++ F+Q G G +++G + H+H +GD++ C STG H+NP H +H GD GN V + + +H++ L GP++I+GRSVV+H DDLGK GN S +NGNAG ++AC V+G Sbjct: 94 GLVLFRQLGPGSRLEAYFSLEGFPAEQNASNRAIHVHEFGDLSQGCDSTGPHYNPMEVPHP------QHPGDFGNFVV------RNGQLWRHRVGLTASLAGPHAILGRSVVVHAGEDDLGKGGNQASLQNGNAGRRLACCVVG 225
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODE_RABIT (Extracellular superoxide dismutase [Cu-Zn] OS=Oryctolagus cuniculus GN=SOD3 PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.122e-17 Identity = 53/144 (36.81%), Postives = 79/144 (54.86%), Query Frame = 3 Query: 129 GILHFKQEGDGPTT-----IKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHK---LIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIG 536 G++ F+Q G G ++G + + H+H +GD++ C STG H+NP H +H GD GN V DG+ + K++ L GP+SI+GR+VV+H DDLG+ GN S +NGNAG ++AC V+G Sbjct: 84 GLVVFRQLGPGAQLEAFFDLEGFPVEANLSSRAIHVHQFGDLSQGCDSTGAHYNPLAVQHP------QHPGDFGNFAVR-DGR-----LWKYRSGLAASLAGPHSIVGRAVVVHAGEDDLGRGGNAASVENGNAGPRLACCVVG 215 The following BLAST results are available for this feature:
BLAST of CX288704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288704 ID=CX288704; Name=CX288704; organism=Citrus clementina; type=EST; length=589bpback to top |