CX288704
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODE_HUMAN (Extracellular superoxide dismutase [Cu-Zn] OS=Homo sapiens GN=SOD3 PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 5.567e-17 Identity = 45/117 (38.46%), Postives = 67/117 (57.26%), Query Frame = 3 Query: 195 SQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYV--GFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 + + H+H +GD++ C+STG H+NP H +H GD GN V G + + + L GP+SI+GR+VV+H DDLG+ GN S +NGNAG ++AC V+G+ Sbjct: 107 NSSSRAIHVHQFGDLSQGCESTGPHYNPLAVPHP------QHPGDFGNFAVRDGSLWRYRAGLAAS-----LAGPHSIVGRAVVVHAGEDDLGRGGNQASVENGNAGRRLACCVVGV 212
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODCP_POPTM (Superoxide dismutase [Cu-Zn], chloroplastic OS=Populus tremuloides GN=SODCP PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.378e-14 Identity = 48/115 (41.74%), Postives = 63/115 (54.78%), Query Frame = 3 Query: 210 GFHIHVYGDMA--HFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINI---VDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 GF + Y M S DH + D ED IRHAGDLGNI +G A+ + H L PNS++GR++V+H+ DDLGK G+ S GNAG ++ACGV+GL Sbjct: 88 GFMVFTYMSMVIPQMGVSQQDHILIQQVDTWCSEDEIRHAGDLGNIVANAEGVAECRQSWQIRYHSL----RPNSVVGRALVVHELQDDLGKGGHELSLSTGNAGGRLACGVVGL 198 The following BLAST results are available for this feature:
BLAST of CX288704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288704 ID=CX288704; Name=CX288704; organism=Citrus clementina; type=EST; length=589bpback to top |