CX288704
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_CEBAP (Superoxide dismutase [Cu-Zn] OS=Cebus apella GN=SOD1 PE=2 SV=3) HSP 1 Score: 155.992 bits (393), Expect = 1.275e-37 Identity = 76/152 (50.00%), Postives = 103/152 (67.76%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 +KAV + +G ++F+Q E +GP + G++ L++G HGFH+H +GD C S G HFNP + HGGPED RH GDLGN+ G DG AK++I D +I L G +SIIGR++V+H+K DDLGK GN S K GNAG ++ACGVIG+ Sbjct: 3 MKAVCVLKGDGPVQGTINFEQKESNGPVKVWGSITGLAEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRKHGGPEDEERHVGDLGNVTAGKDGVAKVSIED--SVISLSGDHSIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODCP_MEDSA (Superoxide dismutase [Cu-Zn], chloroplastic OS=Medicago sativa GN=SODCP PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.275e-37 Identity = 77/150 (51.33%), Postives = 99/150 (66.00%), Query Frame = 3 Query: 90 KAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 KAVA + +G++ QE + PTT+ + L+ G HGFH+H YGD + C STG HFNP + HG PED IRHAGDLGNI +G A+ IVD IPL GPNS+IGR++V+H+ DDLGK G+ S GNAG ++ACGV+GL Sbjct: 52 KAVAVLKGNSTVEGVVTLTQENESPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGPHFNPNQLTHGAPEDEIRHAGDLGNIIADANGVAEATIVDNQ--IPLTGPNSVIGRALVVHELEDDLGKGGHELSLSTGNAGGRLACGVVGL 199
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_SCHMA (Superoxide dismutase [Cu-Zn] OS=Schistosoma mansoni GN=SOD PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.665e-37 Identity = 79/154 (51.30%), Postives = 99/154 (64.29%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGD-GPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQA 545 +KAV + G KG++ F QE D GP + L G HGFH+H +GD + C S G HFNP +++HG PED IRH GDLGN+ G DG A N D KLI L G +SIIGR++VIH+ DDLG+ G+ SK GNAG ++ACGVIGL A Sbjct: 1 MKAVCVMTGTAGVKGVVKFTQETDNGPVHVHAEFSGLKAGKHGFHVHEFGDTTNGCTSAGAHFNPTKQEHGAPEDSIRHVGDLGNVVAGADGNAVYNATD--KLISLNGSHSIIGRTMVIHENEDDLGRGGHELSKVTGNAGGRLACGVIGLAA 152
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODCP_SOLCS (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solidago canadensis var. scabra GN=SODCP PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.174e-37 Identity = 77/152 (50.66%), Postives = 98/152 (64.47%), Query Frame = 3 Query: 84 TVKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 T KAVA + +G++ QE DGPTT+ + L+ G HGFH+H +GD + C STG HFNP HG PED RHAGDLGNI DG A+ IVD IPL GPN+++GR+ V+H+ DDLGK G+ S GNAG ++ACGV+GL Sbjct: 68 TKKAVAVLKGTSSVEGVVTLTQEEDGPTTVNVKITGLTPGPHGFHLHEFGDTTNGCISTGPHFNPNGNTHGAPEDENRHAGDLGNIIANADGVAEATIVDNQ--IPLTGPNAVVGRAFVVHELADDLGKGGHELSLSTGNAGGRLACGVVGL 217
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_MACMU (Superoxide dismutase [Cu-Zn] OS=Macaca mulatta GN=SOD1 PE=2 SV=3) HSP 1 Score: 154.836 bits (390), Expect = 2.839e-37 Identity = 75/152 (49.34%), Postives = 103/152 (67.76%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 +KAV + +G ++F+Q E +GP + G++ L++G HGFH+H +GD C S G HFNP + HGGP+D RH GDLGN+ G DG AK++ D +I L G +SIIGR++V+H+K DDLGK GN SKK GNAG ++ACGVIG+ Sbjct: 3 MKAVCVLKGDSPVQGTINFEQKESNGPVKVWGSITGLTEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRQHGGPKDEERHVGDLGNVTAGKDGVAKVSFED--SVISLSGDHSIIGRTLVVHEKADDLGKGGNEESKKTGNAGGRLACGVIGI 152
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_MACFU (Superoxide dismutase [Cu-Zn] OS=Macaca fuscata fuscata GN=SOD1 PE=2 SV=3) HSP 1 Score: 154.836 bits (390), Expect = 2.839e-37 Identity = 75/152 (49.34%), Postives = 103/152 (67.76%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 +KAV + +G ++F+Q E +GP + G++ L++G HGFH+H +GD C S G HFNP + HGGP+D RH GDLGN+ G DG AK++ D +I L G +SIIGR++V+H+K DDLGK GN SKK GNAG ++ACGVIG+ Sbjct: 3 MKAVCVLKGDSPVQGTINFEQKESNGPVKVWGSITGLTEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRQHGGPKDEERHVGDLGNVTAGKDGVAKVSFED--SVISLSGDHSIIGRTLVVHEKADDLGKGGNEESKKTGNAGGRLACGVIGI 152
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_MACFA (Superoxide dismutase [Cu-Zn] OS=Macaca fascicularis GN=SOD1 PE=2 SV=3) HSP 1 Score: 154.836 bits (390), Expect = 2.839e-37 Identity = 75/152 (49.34%), Postives = 103/152 (67.76%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 +KAV + +G ++F+Q E +GP + G++ L++G HGFH+H +GD C S G HFNP + HGGP+D RH GDLGN+ G DG AK++ D +I L G +SIIGR++V+H+K DDLGK GN SKK GNAG ++ACGVIG+ Sbjct: 3 MKAVCVLKGDSPVQGTINFEQKESNGPVKVWGSITGLTEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRQHGGPKDEERHVGDLGNVTAGKDGVAKVSFED--SVISLSGDHSIIGRTLVVHEKADDLGKGGNEESKKTGNAGGRLACGVIGI 152
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_HALRO (Superoxide dismutase [Cu-Zn] OS=Halocynthia roretzi PE=1 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 2.839e-37 Identity = 77/152 (50.66%), Postives = 102/152 (67.11%), Query Frame = 3 Query: 84 TVKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 ++KAV ++ KG L+FKQ+ G T+ G + L G HGFHIH YGD+ + C S+G HFNPF++ HG PED IRH GDLGNI G A +NI D ++I L G +SIIGR+VV+H DDLGK G+ SK G+AG +++CGVIG+ Sbjct: 2 SIKAVCVLVGS--VKGTLNFKQDAIGSCTVTGEVSGLIPGKHGFHIHEYGDLTNGCTSSGGHFNPFKQIHGAPEDDIRHVGDLGNITADSSGVATVNITD--RMISLTGEHSIIGRAVVVHAGEDDLGKGGHEDSKTTGHAGGRLSCGVIGI 149
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODCP_ORYSJ (Superoxide dismutase [Cu-Zn], chloroplastic OS=Oryza sativa subsp. japonica GN=SODCP PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.839e-37 Identity = 76/152 (50.00%), Postives = 99/152 (65.13%), Query Frame = 3 Query: 84 TVKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 T KAVA + +G++ Q+ GPTT+ + L+ G HGFH+H +GD + C STG HFNP HG PED +RHAGDLGNI +G A+ IVDK IPL GPNS++GR+ V+H+ DDLGK G+ S GNAG ++ACGV+GL Sbjct: 59 TKKAVAVLKGTSQVEGVVTLTQDDQGPTTVNVRVTGLTPGLHGFHLHEFGDTTNGCISTGPHFNPNNLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDKQ--IPLSGPNSVVGRAFVVHELEDDLGKGGHELSLSTGNAGGRLACGVVGL 208
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODCP_PETHY (Superoxide dismutase [Cu-Zn], chloroplastic OS=Petunia hybrida GN=SODCP PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 3.708e-37 Identity = 75/152 (49.34%), Postives = 99/152 (65.13%), Query Frame = 3 Query: 84 TVKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 T KAVA + +G++ Q+ DGPTT+K + L+ G HGFH+H +GD + C STG HFNP HG P D +RHAGDLGNI G A+ +VD IPL GPNS++GR++V+H+ DDLGK G+ S GNAG ++ACGV+GL Sbjct: 67 TKKAVAVLKGTSNVEGVVTLTQDDDGPTTVKVRITGLAPGLHGFHLHEFGDTTNGCMSTGPHFNPNGLTHGAPGDEVRHAGDLGNIEANASGVAEATLVDNQ--IPLSGPNSVVGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 216 The following BLAST results are available for this feature:
BLAST of CX288704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288704 ID=CX288704; Name=CX288704; organism=Citrus clementina; type=EST; length=589bpback to top |