CX288704
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODCP_ZANAE (Superoxide dismutase [Cu-Zn], chloroplastic OS=Zantedeschia aethiopica GN=SODCP PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 6.326e-37 Identity = 77/152 (50.66%), Postives = 97/152 (63.82%), Query Frame = 3 Query: 84 TVKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 T KAVA + G++ QE DGPTT+ + L+ G HGFH+H YGD + C STG HFNP + HG P D +RHAGDLGNI DG A+ IVD IPL G NS++GR+ V+H+ DDLGK G+ S GNAG ++ACGV+GL Sbjct: 64 TKKAVAVLKGTSQVDGVVTLVQEDDGPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGSHFNPNKLTHGAPMDVVRHAGDLGNIVANVDGLAEATIVDDQ--IPLSGSNSVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 213
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODE_BRUPA (Extracellular superoxide dismutase [Cu-Zn] OS=Brugia pahangi PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.079e-36 Identity = 81/158 (51.27%), Postives = 104/158 (65.82%), Query Frame = 3 Query: 84 TVKAVAYVISKWGP-KGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGK-VGNY--HSKKNGNAGDKIACGVIGLQA 545 T A+A + S G G +HF+Q+ + TTI G + L+ G HGFH+H YGD + C S G HFNP+ K HG P D +RH GDLGNI G DG A I+I DKH + L+GPNSIIGRS+V+H DDLGK VG+ S K GNAG ++ACG++ + A Sbjct: 45 TATAIAVLHSDNGNINGTIHFQQDKNS-TTISGEIKGLTPGLHGFHVHQYGDTTNGCISAGPHFNPYNKTHGDPTDEMRHVGDLGNIVAGADGTAHIDISDKH--VQLLGPNSIIGRSLVVHADQDDLGKGVGDKKDESLKTGNAGGRVACGIVAISA 199
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_RABIT (Superoxide dismutase [Cu-Zn] OS=Oryctolagus cuniculus GN=SOD1 PE=1 SV=3) HSP 1 Score: 152.91 bits (385), Expect = 1.079e-36 Identity = 73/150 (48.67%), Postives = 97/150 (64.67%), Query Frame = 3 Query: 90 KAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 KAV + + +HF+Q+G GP +KG + L++G H FH+H +GD C S G HFNP K HGGP+D RH GDLGN+ G +G A + I D +I L G S+IGR++V+H+K DDLGK GN S K GNAG ++ACGVIG+ Sbjct: 4 KAVCVLKGDGPVEATIHFEQKGTGPVVVKGRITGLTEGLHEFHVHQFGDNRQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTAGSNGVADVLIED--SVISLSGDMSVIGRTLVVHEKEDDLGKGGNDESTKTGNAGSRLACGVIGI 151
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_HYLLA (Superoxide dismutase [Cu-Zn] OS=Hylobates lar GN=SOD1 PE=2 SV=3) HSP 1 Score: 152.91 bits (385), Expect = 1.079e-36 Identity = 75/152 (49.34%), Postives = 102/152 (67.11%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 +KAV + +GI++F+Q E +GP + G + L++G HGFH+H +GD C S G HFNP + HGGP+D RH GDLGN+ DG AK++I D +I L G +SIIGR++V+H+K DDLGK GN S K GNAG ++ACGVIG+ Sbjct: 3 MKAVCVLKGDSPVQGIINFEQKESNGPVKVYGRITGLTEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVAKVSIED--SVISLSGDHSIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODCP_ARATH (Superoxide dismutase [Cu-Zn], chloroplastic OS=Arabidopsis thaliana GN=SODCP PE=1 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.079e-36 Identity = 76/150 (50.67%), Postives = 96/150 (64.00%), Query Frame = 3 Query: 90 KAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 KAVA + +G++ Q+ GPTT+ + L+ G HGFH+H +GD + C STG HFNP HG PED RHAGDLGNI DG A+ IVD IPL GPNS++GR+ V+H+ DDLGK G+ S GNAG ++ACGVIGL Sbjct: 66 KAVAVLKGTSDVEGVVTLTQDDSGPTTVNVRITGLTPGPHGFHLHEFGDTTNGCISTGPHFNPNNMTHGAPEDECRHAGDLGNINANADGVAETTIVDNQ--IPLTGPNSVVGRAFVVHELKDDLGKGGHELSLTTGNAGGRLACGVIGL 213
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_PRIGL (Superoxide dismutase [Cu-Zn] OS=Prionace glauca GN=sod1 PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.409e-36 Identity = 72/151 (47.68%), Postives = 100/151 (66.23%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 +KAV + G + F+Q DGP T+KG++ L+ G HGFH+H +GD + C S G H+NPF K+HGGP+D RH GDLGN+ +G A+ I D+ + L G SIIGR++V+H+K DDLGK G+ S + GNAG ++ACGVIG+ Sbjct: 1 MKAVCVLKGTGEVTGTVLFEQAADGPVTLKGSITGLTPGKHGFHVHAFGDNTNGCISAGPHYNPFSKNHGGPDDEERHVGDLGNVEANGNGVAEFEIKDRQ--LHLSGERSIIGRTLVVHEKEDDLGKGGDEESLRTGNAGSRLACGVIGI 149
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_HORSE (Superoxide dismutase [Cu-Zn] OS=Equus caballus GN=SOD1 PE=1 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 1.409e-36 Identity = 73/152 (48.03%), Postives = 102/152 (67.11%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDG-PTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 +KAV + G++HF+Q+ +G P +KG + L++G HGFH+H +GD C + G HFNP K HGGP+D RH GDLGN+ +GKA +++ K +I L G +SIIGR++V+H+K DDLGK GN S K GNAG ++ACGVIG+ Sbjct: 3 LKAVCVLKGDGPVHGVIHFEQQQEGGPVVLKGFIEGLTKGDHGFHVHEFGDNTQGCTTAGAHFNPLSKKHGGPKDEERHVGDLGNVTADENGKADVDM--KDSVISLSGKHSIIGRTMVVHEKQDDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_ONCVO (Superoxide dismutase [Cu-Zn] OS=Onchocerca volvulus GN=sod-1 PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 2.404e-36 Identity = 79/143 (55.24%), Postives = 97/143 (67.83%), Query Frame = 3 Query: 129 GILHFKQEGDG-PTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGK-VG--NYHSKKNGNAGDKIACGVIGLQA 545 GI+ FKQ+ +G PTT+ G + L+ G HGFHIH YGD + C S G HFNP+ K HG D IRH GDLGNI G DG A I+I D+H I L+GPNSIIGRS+V+H DDLGK VG S K GNAG ++ACG++ + A Sbjct: 16 GIIRFKQDKEGLPTTVTGEVKGLTPGLHGFHIHQYGDTTNGCISAGPHFNPYNKTHGDRTDEIRHVGDLGNIEAGADGTAHISISDQH--IQLLGPNSIIGRSIVVHADQDDLGKGVGAKKDESLKTGNAGARVACGIVAIGA 156
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_CHICK (Superoxide dismutase [Cu-Zn] OS=Gallus gallus GN=SOD1 PE=1 SV=3) HSP 1 Score: 151.754 bits (382), Expect = 2.404e-36 Identity = 74/152 (48.68%), Postives = 100/152 (65.79%), Query Frame = 3 Query: 84 TVKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 T+KAV + +G++HF+Q+G GP + G + LS G HGFH+H +GD + C S G HFNP K HGGP+D RH GDLGN+ G A++ I D +I L GP+ IIGR++V+H K DDLG+ G+ SK GNAG ++ACGVIG+ Sbjct: 3 TLKAVCVMKGDAPVEGVIHFQQQGSGPVKVTGKITGLSDGDHGFHVHEFGDNTNGCTSAGAHFNPEGKQHGGPKDADRHVGDLGNV-TAKGGVAEVEIED--SVISLTGPHCIIGRTMVVHAKSDDLGRGGDNESKLTGNAGPRLACGVIGI 151
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC5_DICDI (Superoxide dismutase [Cu-Zn] 5 OS=Dictyostelium discoideum GN=sodE PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 5.355e-36 Identity = 75/146 (51.37%), Postives = 94/146 (64.38%), Query Frame = 3 Query: 105 VISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 VI G GI++FKQ + P I G + L +G HGFH+H +GD + C S G HFNPF+K+HG P D RH GDLGNI D K+ INI D +I L G NSIIGRS+V+HDK DDLG+ + SK GNAG ++ CG+I L Sbjct: 6 VIKGDGVDGIINFKQNDNKSPVIISGVISGLKEGKHGFHVHEFGDTTNGCLSAGAHFNPFKKEHGSPNDENRHVGDLGNIESNKDKKSIINITD--NIITLFGQNSIIGRSIVVHDKEDDLGRGNSQDSKITGNAGSRLGCGIIAL 149 The following BLAST results are available for this feature:
BLAST of CX288704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288704 ID=CX288704; Name=CX288704; organism=Citrus clementina; type=EST; length=589bpback to top |