CX288704
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODE_ONCVO (Extracellular superoxide dismutase [Cu-Zn] OS=Onchocerca volvulus GN=sod-4 PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.938e-34 Identity = 78/156 (50.00%), Postives = 100/156 (64.10%), Query Frame = 3 Query: 90 KAVAYVISKWGPKGILHFKQEGDGP-TTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGK-VGNY--HSKKNGNAGDKIACGVIGLQA 545 +AVA + G GI++F+Q G TTI G++ L+ G HGFH+H YGD + C S GDH+NPF K HGGP D I+H GDLGNI G +G A++ I I L GP S+IG S+V+H DDLG+ GN S K GNAG ++ACGVIG+ A Sbjct: 46 RAVAVLRGDAGVSGIIYFQQGSGGSITTISGSVSGLTPGLHGFHVHQYGDQTNGCTSAGDHYNPFGKTHGGPNDRIKHIGDLGNIVAGANGVAEVYINSYD--IKLRGPLSVIGHSLVVHANTDDLGQGTGNMREESLKTGNAGSRLACGVIGIAA 199
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_CAPHI (Superoxide dismutase [Cu-Zn] OS=Capra hircus GN=SOD1 PE=2 SV=3) HSP 1 Score: 144.821 bits (364), Expect = 2.938e-34 Identity = 73/150 (48.67%), Postives = 97/150 (64.67%), Query Frame = 3 Query: 90 KAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 KAV + +G +HF+ +GD + G++ L++G HGFH+H +GD C S G HFNP K HGGP+D RH GDLGN+ +G A ++IVD LI L G SIIGR++V+H+K DDLG+ GN S K GNAG +ACGVIG+ Sbjct: 4 KAVCVLKGDGPVQGTIHFEAKGD-KVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVKADKNGVAIVDIVD--PLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGSCLACGVIGI 150
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_SHEEP (Superoxide dismutase [Cu-Zn] OS=Ovis aries GN=SOD1 PE=1 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 8.549e-34 Identity = 72/150 (48.00%), Postives = 97/150 (64.67%), Query Frame = 3 Query: 90 KAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 KAV + +G + F+ +GD + G++ L++G HGFH+H +GD C S G HFNP K HGGP+D RH GDLGN+ +G A ++IVD LI L G SIIGR++V+H+K DDLG+ GN S K GNAG ++ACGVIG+ Sbjct: 4 KAVCVLKGDGPVQGTIRFEAKGD-KVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVKADKNGVAIVDIVD--PLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGGRLACGVIGI 150
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_CERCA (Superoxide dismutase [Cu-Zn] OS=Ceratitis capitata GN=Sod PE=3 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 8.549e-34 Identity = 73/152 (48.03%), Postives = 94/152 (61.84%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQE-GDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 VKAV + KG +HF+Q+ P + G + L++G HGFH+H +GD + C S G HFNP+ HG P D RH GDLGNI DG K+ I D KLI L G NSI+GR++V+H DDLGK G+ SK GNAG ++ CGVIG+ Sbjct: 3 VKAVCVI--NGDVKGTVHFEQQDAKSPVLVTGEVNGLAKGLHGFHVHEFGDNTNGCTSAGPHFNPYGNSHGAPSDLNRHLGDLGNIEASGDGATKVEISD--KLITLFGENSIVGRTIVVHADPDDLGKGGHELSKTTGNAGARLGCGVIGI 150
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_DROWI (Superoxide dismutase [Cu-Zn] OS=Drosophila willistoni GN=Sod PE=3 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.117e-33 Identity = 76/152 (50.00%), Postives = 94/152 (61.84%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDG-PTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 VKAV + KG + F+QE +G P + G + L +G HGFH+H +GD + C S+G HFNP K+HG P D RH GDLGNI G +NI D I LVG NSIIGR+VV+H DDLGK G+ SK GNAG +I CGVIG+ Sbjct: 3 VKAVCVI--NGDAKGTVFFEQEDNGAPVKVTGEVTGLGKGLHGFHVHEFGDNTNGCMSSGPHFNPHSKEHGAPGDENRHLGDLGNIEASGSGPTAVNITDSK--ITLVGANSIIGRTVVVHADPDDLGKGGHELSKTTGNAGARIGCGVIGI 150
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_CEREL (Superoxide dismutase [Cu-Zn] OS=Cervus elaphus GN=SOD1 PE=2 SV=3) HSP 1 Score: 142.895 bits (359), Expect = 1.117e-33 Identity = 71/150 (47.33%), Postives = 98/150 (65.33%), Query Frame = 3 Query: 90 KAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 KAV + +G + F+ +G + G++ L++G HGFH+H +GD C S G HFNP K HGGP+D RH GDLGN+ +G AK++IVD LI L G +SIIGR++V+H+K DDLG+ GN S K GNA +++ACGVIG+ Sbjct: 4 KAVCVLKGDGPVQGTIRFEAKGH-TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAKVDIVD--SLISLSGEHSIIGRTMVVHEKPDDLGRGGNEESTKTGNARNRLACGVIGI 150
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_ASHGO (Superoxide dismutase [Cu-Zn] OS=Ashbya gossypii GN=SOD1 PE=3 SV=3) HSP 1 Score: 142.895 bits (359), Expect = 1.117e-33 Identity = 75/153 (49.02%), Postives = 96/153 (62.75%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDGP-TTIKGTLYYLSQGA-HGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 VKAVA + G G++HF+QE D TTI + HGFHIH +GD+ + C S+G HFNPF+K HG PED RH GD+GN+ +G A + K LI + GP SI+GR+VV+H DDLG+ GN S K GNAG + ACGVIG+ Sbjct: 2 VKAVAVLKGDAGVSGVVHFEQEADAAVTTISWNITGFEPNTEHGFHIHEFGDVTNGCTSSGSHFNPFKKTHGSPEDENRHVGDMGNVLADANGVAVGSA--KDPLIKIFGPTSILGRTVVVHAGKDDLGRGGNEESLKTGNAGPRPACGVIGI 152
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_DROSI (Superoxide dismutase [Cu-Zn] OS=Drosophila simulans GN=Sod PE=3 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 7.237e-33 Identity = 74/152 (48.68%), Postives = 95/152 (62.50%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDG-PTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 VKAV + KG + F+QE G P + G + L++G HGFH+H +GD + C S+G HFNP+ K+HG P D RH GDLGNI D K+NI D I L G +SIIGR+VV+H DDLG+ G+ SK GNAG +I CGVIG+ Sbjct: 3 VKAVCVI--NGDAKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVNITDSK--ITLFGADSIIGRTVVVHADADDLGQGGHELSKSTGNAGARIGCGVIGI 150
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_DROSE (Superoxide dismutase [Cu-Zn] OS=Drosophila sechellia GN=Sod PE=3 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 7.237e-33 Identity = 74/152 (48.68%), Postives = 95/152 (62.50%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDG-PTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 VKAV + KG + F+QE G P + G + L++G HGFH+H +GD + C S+G HFNP+ K+HG P D RH GDLGNI D K+NI D I L G +SIIGR+VV+H DDLG+ G+ SK GNAG +I CGVIG+ Sbjct: 3 VKAVCVI--NGDAKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVNITDSK--ITLFGADSIIGRTVVVHADADDLGQGGHELSKSTGNAGARIGCGVIGI 150
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_DROME (Superoxide dismutase [Cu-Zn] OS=Drosophila melanogaster GN=Sod PE=1 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 7.237e-33 Identity = 74/152 (48.68%), Postives = 95/152 (62.50%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDG-PTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 VKAV + KG + F+QE G P + G + L++G HGFH+H +GD + C S+G HFNP+ K+HG P D RH GDLGNI D K+NI D I L G +SIIGR+VV+H DDLG+ G+ SK GNAG +I CGVIG+ Sbjct: 3 VKAVCVI--NGDAKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVNITDSK--ITLFGADSIIGRTVVVHADADDLGQGGHELSKSTGNAGARIGCGVIGI 150 The following BLAST results are available for this feature:
BLAST of CX288704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288704 ID=CX288704; Name=CX288704; organism=Citrus clementina; type=EST; length=589bpback to top |