CX288704
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_DROMA (Superoxide dismutase [Cu-Zn] OS=Drosophila mauritiana GN=Sod PE=3 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 7.237e-33 Identity = 74/152 (48.68%), Postives = 95/152 (62.50%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDG-PTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 VKAV + KG + F+QE G P + G + L++G HGFH+H +GD + C S+G HFNP+ K+HG P D RH GDLGNI D K+NI D I L G +SIIGR+VV+H DDLG+ G+ SK GNAG +I CGVIG+ Sbjct: 3 VKAVCVI--NGDAKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVNITDSK--ITLFGADSIIGRTVVVHADADDLGQGGHELSKSTGNAGARIGCGVIGI 150
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_CAEEL (Superoxide dismutase [Cu-Zn] OS=Caenorhabditis elegans GN=sod-1 PE=1 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 7.237e-33 Identity = 73/137 (53.28%), Postives = 90/137 (65.69%), Query Frame = 3 Query: 144 KQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGK-VGN--YHSKKNGNAGDKIACGVIGLQA 545 K E D I+G + L+ G HGFH+H YGD + C S G HFNPF K HGGP+ IRH GDLGN+ G DG AKI + D L+ L GPN+++GRS+V+H DDLG+ VG+ SKK GNAG + ACGVI L A Sbjct: 45 KSEND-QAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTD--TLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKAEESKKTGNAGARAACGVIALAA 178
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_CANGA (Superoxide dismutase [Cu-Zn] OS=Candida glabrata GN=SOD1 PE=3 SV=3) HSP 1 Score: 139.043 bits (349), Expect = 1.612e-32 Identity = 77/153 (50.33%), Postives = 94/153 (61.44%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGD-GPTTIKGTLYYLSQGAH-GFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 VKAVA + G G++ +Q + PTTI + A GFHIH +GD+ + C S G HFNPF+K HG P+D RH GDLGNI G AK I D L+ L+GP S++GRSVV+H DDLGK GN S K GNAG + ACGVIGL Sbjct: 2 VKAVAVLRGSAGVSGVVTLEQASEQDPTTITYEIAGNDPNAERGFHIHEFGDVTNGCVSAGPHFNPFKKTHGAPQDENRHVGDLGNIKTDAQGVAKGVITD--SLVKLIGPTSVVGRSVVVHAGTDDLGKGGNEESLKTGNAGPRPACGVIGL 152
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_CHYAM (Superoxide dismutase [Cu-Zn] OS=Chymomyza amoena GN=Sod PE=3 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 2.106e-32 Identity = 72/150 (48.00%), Postives = 92/150 (61.33%), Query Frame = 3 Query: 93 AVAYVISKWGPKGILHFKQEGD-GPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 A A + KG ++F+QE P + G + L++G HGFH+H +GD + C S+G HFNP K+HG P D RH GDLGNI DG K+ I D I L G NSI+GR+VV+H DDLGK G+ SK GNAG +I CGVIG+ Sbjct: 3 AKAVCVINGDAKGTVYFEQEDACAPVKVCGEITGLNKGQHGFHVHEFGDNTNGCMSSGPHFNPLNKEHGAPTDENRHLGDLGNIEAPGDGPTKVCINDSK--ITLFGENSIVGRTVVVHADPDDLGKGGHELSKSTGNAGARIGCGVIGI 150
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_CRYGA (Superoxide dismutase [Cu-Zn] OS=Cryptococcus gattii GN=SOD1 PE=2 SV=3) HSP 1 Score: 138.272 bits (347), Expect = 2.750e-32 Identity = 74/153 (48.37%), Postives = 93/153 (60.78%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDG-PTTIKGTLYYLSQGAH-GFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 VKAVA + G++ F QE +G P T+ G + L A GFH+H +GD + C S G HFNP K+HG P D RH GDLGN+ +G A +NI DK + L GP SIIGR++V+H DD GK GN S K GNAG + ACGVIG+ Sbjct: 2 VKAVAVLKGDSPVTGVITFTQEKEGAPVTVSGDIKNLDANAERGFHVHEFGDNTNGCTSAGPHFNPHGKNHGAPSDSERHVGDLGNVKTDGNGVASVNISDKS--LSLFGPYSIIGRTIVVHAGTDDFGKGGNAESLKTGNAGARAACGVIGI 152
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_CAEBR (Superoxide dismutase [Cu-Zn] OS=Caenorhabditis briggsae GN=sod-1 PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 2.750e-32 Identity = 71/131 (54.20%), Postives = 86/131 (65.65%), Query Frame = 3 Query: 162 PTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGK-VGN--YHSKKNGNAGDKIACGVIGLQA 545 P I+G + L+ G HGFH+H YGD + C S G HFNPF K HGGP RH GDLGN+ G DG AK++I D KLI L G N++IGRS+V+H DDLG+ VG+ S K GNAG + ACGVI L A Sbjct: 50 PAVIEGEIKGLTPGLHGFHVHQYGDSTNGCLSAGPHFNPFGKTHGGPNSETRHVGDLGNVEAGADGVAKVHITD--KLITLYGANTVIGRSMVVHAGQDDLGQGVGDKAEESAKTGNAGARAACGVIALAA 178
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_DROOR (Superoxide dismutase [Cu-Zn] OS=Drosophila orena GN=Sod PE=3 SV=3) HSP 1 Score: 137.887 bits (346), Expect = 3.592e-32 Identity = 73/152 (48.03%), Postives = 95/152 (62.50%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEG-DGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 VKAV + KG + F+QE + P + G + L++G HGFH+H +GD + C S+G HFNP+ K+HG P D RH GDLGNI D K++I D I L G +SIIGR+VV+H DDLGK G+ SK GNAG +I CGVIG+ Sbjct: 3 VKAVCVI--NGDAKGTVFFEQESSETPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVSITDSR--ITLFGADSIIGRTVVVHADADDLGKGGHELSKSTGNAGARIGCGVIGI 150
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_DROYA (Superoxide dismutase [Cu-Zn] OS=Drosophila yakuba GN=Sod PE=3 SV=3) HSP 1 Score: 137.502 bits (345), Expect = 4.691e-32 Identity = 73/152 (48.03%), Postives = 95/152 (62.50%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEG-DGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 VKAV + KG + F+QE + P + G + L++G HGFH+H +GD + C S+G HFNP+ K+HG P D RH GDLGNI D K++I D I L G +SIIGR+VV+H DDLGK G+ SK GNAG +I CGVIG+ Sbjct: 3 VKAVCVI--NGDAKGTVFFEQESSETPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVSITDSK--ITLFGADSIIGRTVVVHADADDLGKGGHELSKSTGNAGARIGCGVIGI 150
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_YEAST (Superoxide dismutase [Cu-Zn] OS=Saccharomyces cerevisiae GN=SOD1 PE=1 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 8.002e-32 Identity = 74/153 (48.37%), Postives = 94/153 (61.44%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDG-PTTIKGTLYYLSQGAH-GFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 V+AVA + G G++ F+Q + PTT+ + S A GFHIH +GD + C S G HFNPF+K HG P D +RH GD+GN+ +G AK + K LI L+GP S++GRSVVIH DDLGK S K GNAG + ACGVIGL Sbjct: 2 VQAVAVLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVSAGPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSF--KDSLIKLIGPTSVVGRSVVIHAGQDDLGKGDTEESLKTGNAGPRPACGVIGL 152
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_DROPS (Superoxide dismutase [Cu-Zn] OS=Drosophila pseudoobscura pseudoobscura GN=Sod PE=3 SV=3) HSP 1 Score: 136.732 bits (343), Expect = 8.002e-32 Identity = 72/152 (47.37%), Postives = 93/152 (61.18%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQE-GDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 VKAV + KG + F+QE + P + G + L++G HGFH+H +GD + C S+G HFNP K+HG P D RH GDLGNI D ++I D I L G +SIIGR+VV+H DDLGK G+ SK GNAG +I CGVIG+ Sbjct: 2 VKAVCVI--NGDAKGTVFFEQETSEAPVKVTGEVLGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPRNKEHGAPTDENRHLGDLGNIQAAGDSPTAVSITDSK--ITLFGADSIIGRTVVVHADADDLGKGGHELSKTTGNAGARIGCGVIGI 149 The following BLAST results are available for this feature:
BLAST of CX288704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288704 ID=CX288704; Name=CX288704; organism=Citrus clementina; type=EST; length=589bpback to top |