CX288704
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_HAECO (Superoxide dismutase [Cu-Zn] OS=Haemonchus contortus GN=SOD PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.045e-31 Identity = 73/156 (46.79%), Postives = 95/156 (60.90%), Query Frame = 3 Query: 90 KAVAYVISKWGPKGILHFKQEGDG-PTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGK-VG--NYHSKKNGNAGDKIACGVIGLQA 545 +AVA + G G + F Q+ + P IKG + L+ G HGFH+H YGD + C S G HFNPF K HGGP+D +RH GDLGN+ G DG A I K L+ + G ++++GRS+V+H DDLGK VG S K GN G ++ACGVI A Sbjct: 4 RAVAVLRGDPGVTGTVWFSQDKESDPCVIKGEIKGLTPGLHGFHVHQYGDSTNGCTSAGPHFNPFNKTHGGPKDDVRHVGDLGNVEAGADGVAHFEI--KDHLVKIHGEHTVVGRSLVVHAGTDDLGKGVGEKKEESLKTGNRGARVACGVIATAA 157
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_BOMMO (Superoxide dismutase [Cu-Zn] OS=Bombyx mori PE=1 SV=3) HSP 1 Score: 136.346 bits (342), Expect = 1.045e-31 Identity = 72/151 (47.68%), Postives = 94/151 (62.25%), Query Frame = 3 Query: 93 AVAYVISKWGPKGILHFKQEGD-GPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFD-GKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 A A + + G + F Q+ + P + G + L++G HGFH+H +GD + C S G HFNP ++DHGGP +RH GDLGNI D G K++I D I L GPNSIIGR++V+H DDLG G+ SK GNAG +IACGVIGL Sbjct: 3 AKAVCVLRGDVSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQ--ISLHGPNSIIGRTLVVHADPDDLGLGGHELSKTTGNAGGRIACGVIGL 151
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_DROTE (Superoxide dismutase [Cu-Zn] OS=Drosophila teissieri GN=Sod PE=3 SV=3) HSP 1 Score: 135.961 bits (341), Expect = 1.365e-31 Identity = 72/152 (47.37%), Postives = 95/152 (62.50%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEG-DGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 VKAV + KG + F+QE + P + G + L++G HGFH+H +GD + C S+G HFNP+ K+HG P D RH GDLGNI D K++I D I L G +SIIGR+VV+H DDLG+ G+ SK GNAG +I CGVIG+ Sbjct: 3 VKAVCVI--NGDAKGTVFFEQESSETPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVSITDSK--ITLFGADSIIGRTVVVHADADDLGQGGHELSKSTGNAGARIGCGVIGI 150
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_KLULA (Superoxide dismutase [Cu-Zn] OS=Kluyveromyces lactis GN=SOD1 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.783e-31 Identity = 76/153 (49.67%), Postives = 93/153 (60.78%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEG-DGPTTIKGTLYYLSQGA-HGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 V AVA + GI+ F+QE D T I + A GFHIH +GD + C S G HFNPF K+HG PED RH GDLGNI G +K ++ DKH I L+GP SI+GR+VV+H DDLGK G+ S K GNAG + ACGVIG+ Sbjct: 2 VNAVAVLKGDSSVSGIVRFEQESEDQQTKISWEITGNDANALRGFHIHTFGDNTNGCTSAGPHFNPFNKNHGAPEDEERHVGDLGNIPTDAQGISKGSLTDKH--IKLLGPLSIVGRTVVVHAGQDDLGKGGDAESLKTGNAGARHACGVIGI 152
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_DROBS (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila busckii GN=Sod PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.783e-31 Identity = 70/139 (50.36%), Postives = 89/139 (64.03%), Query Frame = 3 Query: 126 KGILHFKQEGDG-PTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 KG + F+QE + P + G + L++G HGFH+H +GD + C S+G HFNP K+HG P D RH GDLGNI DG ++I D I L G NSIIGR+VV+H DDLGK G+ SK GNAG +I CGVIG+ Sbjct: 6 KGTVFFEQESEKCPVKVTGEVTGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPQGKEHGAPTDENRHLGDLGNITATGDGPTAVDICDCK--ITLFGANSIIGRTVVVHADPDDLGKGGHELSKTTGNAGARIGCGVIGI 142
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_YARLI (Superoxide dismutase [Cu-Zn] OS=Yarrowia lipolytica GN=SOD1 PE=3 SV=3) HSP 1 Score: 135.191 bits (339), Expect = 2.328e-31 Identity = 76/155 (49.03%), Postives = 95/155 (61.29%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGD-GPTTIKGTLYYLSQGAH-GFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQA 545 VKAVA + G + F+Q+ + GP T+ + A GFH+H +GD + C S G HFNPF+K+HGGP D RH GDLGN+ +G AK V K L+ L G NSI+GR+VVIH DDLGK G+ S K GNAG + ACGVIGL A Sbjct: 2 VKAVAVLRGDSKVSGTVTFEQDSESGPVTVTYDIKGNDPNAERGFHVHEFGDNTNGCTSAGPHFNPFKKNHGGPTDSERHVGDLGNVKTDSEGVAK--GVLKDSLLKLTGDNSIVGRTVVIHGGEDDLGKGGHADSLKTGNAGPRPACGVIGLTA 154
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC1_DEBHA (Superoxide dismutase [Cu-Zn] 1 OS=Debaryomyces hansenii GN=SOD1 PE=1 SV=4) HSP 1 Score: 135.191 bits (339), Expect = 2.328e-31 Identity = 75/152 (49.34%), Postives = 93/152 (61.18%), Query Frame = 3 Query: 90 KAVAYVISKWGPKGILHFKQEGDG-PTTIKGTLYYLSQGA-HGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 KAVA + G+++F+Q + PTTI + A GFH+H +GD + C S G HFNPF K+HG PED RH GDLGN+ G AK + D + L+G NSI+GR+VVIH DDLGK GN SKK GNAG + ACGVIGL Sbjct: 3 KAVAVLRGDSKVSGVVNFEQSSESDPTTITWEISGNDANALRGFHVHTFGDNTNGCTSAGPHFNPFTKEHGAPEDDNRHVGDLGNVTTDTSGVAKGSKQD--LFVKLIGQNSILGRTVVIHAGTDDLGKGGNAESKKTGNAGARPACGVIGL 152
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODE_DIRIM (Extracellular superoxide dismutase [Cu-Zn] OS=Dirofilaria immitis PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.041e-31 Identity = 79/160 (49.38%), Postives = 98/160 (61.25%), Query Frame = 3 Query: 75 GVPTVKAVAYVISKWGPKGILHFKQEGDGP-TTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGN----YHSKKNGNAGDKIACGVIGL 539 G+P KAVA V+ GI++F+Q TTI GT+ L+ G HGFHIH YG A+ C S H+NPF K HG P + I+H GDL NI G DG A +NI+ H I L GP S+IGRS+V+H DDLGK GN S K GNAG +I C +IG+ Sbjct: 37 GMPK-KAVA-VLKSDTVNGIIYFQQNNRASATTIYGTINGLTPGLHGFHIHQYGIKANGCTSAAAHYNPFEKTHGRPTNNIKHIGDLRNIKAGADGVANVNIISNH--IQLSGPLSVIGRSLVVHANPDDLGK-GNGDAREESLKTGNAGSRIVCSIIGI 191
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_CORMI (Superoxide dismutase [Cu-Zn] OS=Cordyceps militaris GN=SOD1 PE=2 SV=3) HSP 1 Score: 133.65 bits (335), Expect = 6.774e-31 Identity = 73/153 (47.71%), Postives = 91/153 (59.48%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEGDG-PTTIKGTLYYLSQGAH-GFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 VKAV + G + F+QE + PTTI + A GFHIH +GD + C S G HFNP K HG P D RH GDLGNI G AK ++ D H + L+GP+S++GR+VV+H DDLGK GN S K GNAG + ACGVIG+ Sbjct: 2 VKAVCVLRGDAKVAGTVTFEQESESAPTTITWDITGNDPNAERGFHIHTFGDNTNGCTSAGPHFNPHGKTHGAPTDAARHVGDLGNIKTDGQGNAKGSVQDSH--VKLIGPHSVVGRTVVVHGGTDDLGKGGNEESLKTGNAGPRPACGVIGV 152
BLAST of CX288704 vs. ExPASy Swiss-Prot
Match: SODC_DROER (Superoxide dismutase [Cu-Zn] OS=Drosophila erecta GN=Sod PE=3 SV=3) HSP 1 Score: 132.494 bits (332), Expect = 1.509e-30 Identity = 72/152 (47.37%), Postives = 93/152 (61.18%), Query Frame = 3 Query: 87 VKAVAYVISKWGPKGILHFKQEG-DGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKDHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 539 VKAV + KG + F+QE + P + G + L++ HGFH+H +GD + C S+G HFNP K+HG P D RH GDLGNI D K++I D I L G +SIIGR+VV+H DDLGK G+ SK GNAG +I CGVIG+ Sbjct: 3 VKAVCVI--NGDAKGTVFFEQESSETPVKVSGEVCGLAKCLHGFHVHEFGDNTNGCMSSGPHFNPHGKEHGAPVDENRHLGDLGNIEATGDCPTKVSITDSK--ITLFGADSIIGRTVVVHADADDLGKGGHELSKSTGNAGARIGCGVIGI 150 The following BLAST results are available for this feature:
BLAST of CX288704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288704 ID=CX288704; Name=CX288704; organism=Citrus clementina; type=EST; length=589bpback to top |